ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf114d13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1Q9SJ05:AROK_ARATH Probable shikimate kinase, chloroplast precurs... 94 1e-18
2Q00497:AROK_SOLLC Shikimate kinase, chloroplast precursor - Sola... 78 9e-14
3Q2JKT7:AROK_SYNJB Shikimate kinase - Synechococcus sp. (strain J... 73 2e-12
4Q31PU5:AROK_SYNP7 Shikimate kinase - Synechococcus sp. (strain P... 72 5e-12
5Q5N4D3:AROK_SYNP6 Shikimate kinase - Synechococcus sp. (strain A... 72 5e-12
6Q7VE85:AROK_PROMA Shikimate kinase - Prochlorococcus marinus 68 7e-11
7Q2JRJ6:AROK_SYNJA Shikimate kinase - Synechococcus sp. (strain J... 65 6e-10
8Q46HR4:AROK_PROMT Shikimate kinase - Prochlorococcus marinus (st... 62 4e-09
9Q8YXG9:AROK_ANASP Shikimate kinase - Anabaena sp. (strain PCC 7120) 62 4e-09
10P72796:AROK_SYNY3 Shikimate kinase - Synechocystis sp. (strain P... 62 5e-09
11Q3MFQ9:AROK_ANAVT Shikimate kinase - Anabaena variabilis (strain... 60 2e-08
12Q7NH27:AROK_GLOVI Shikimate kinase - Gloeobacter violaceus 59 3e-08
13Q7U469:AROK_SYNPX Shikimate kinase - Synechococcus sp. (strain W... 55 5e-07
14Q8DKH7:AROK_SYNEL Shikimate kinase - Synechococcus elongatus (Th... 54 1e-06
15Q3AH55:AROK_SYNSC Shikimate kinase - Synechococcus sp. (strain C... 52 4e-06
16Q7V904:AROK_PROMM Shikimate kinase - Prochlorococcus marinus (st... 52 4e-06
17Q3B009:AROK_SYNS9 Shikimate kinase - Synechococcus sp. (strain C... 52 7e-06
18Q5QV48:AROK_IDILO Shikimate kinase - Idiomarina loihiensis 49 6e-05
19O67925:AROK_AQUAE Shikimate kinase - Aquifex aeolicus 49 6e-05
20Q31DP8:AROK_THICR Shikimate kinase - Thiomicrospira crunogena (s... 48 1e-04
21Q98FY0:AROK_RHILO Shikimate kinase - Rhizobium loti (Mesorhizobi... 48 1e-04
22Q2RI74:AROK_MOOTA Shikimate kinase - Moorella thermoacetica (str... 48 1e-04
23Q6NH03:AROK_CORDI Shikimate kinase - Corynebacterium diphtheriae 48 1e-04
24Q8KCL0:AROK_CHLTE Shikimate kinase - Chlorobium tepidum 47 2e-04
25Q9X5D1:AROK_CORGL Shikimate kinase - Corynebacterium glutamicum ... 45 5e-04
26Q3AR93:AROK_CHLCH Shikimate kinase - Chlorobium chlorochromatii ... 44 0.001
27Q6F7E4:AROK_ACIAD Shikimate kinase - Acinetobacter sp. (strain A... 44 0.001
28Q3B316:AROK_PELLD Shikimate kinase - Pelodictyon luteolum (strai... 44 0.002
29Q6LVF6:AROK_PHOPR Shikimate kinase - Photobacterium profundum (P... 43 0.002
30P63600:AROK_NEIMB Putative shikimate kinase - Neisseria meningit... 43 0.002
31P63599:AROK_NEIMA Putative shikimate kinase - Neisseria meningit... 43 0.002
32Q3Z991:AROK_DEHE1 Shikimate kinase - Dehalococcoides ethenogenes... 43 0.002
33Q67N09:AROK_SYMTH Shikimate kinase - Symbiobacterium thermophilum 43 0.003
34Q2YBB2:AROK_NITMU Shikimate kinase - Nitrosospira multiformis (s... 43 0.003
35Q5FAD3:AROK_NEIG1 Shikimate kinase - Neisseria gonorrhoeae (stra... 43 0.003
36Q74BL5:AROK_GEOSL Shikimate kinase - Geobacter sulfurreducens 43 0.003
37Q82TC0:AROK_NITEU Shikimate kinase - Nitrosomonas europaea 42 0.007
38Q83AJ3:AROK_COXBU Shikimate kinase - Coxiella burnetii 41 0.012
39Q8FY59:AROK_BRUSU Shikimate kinase - Brucella suis 40 0.016
40Q57AM8:AROK_BRUAB Shikimate kinase - Brucella abortus 40 0.016
41Q2YR42:AROK_BRUA2 Shikimate kinase - Brucella abortus (strain 2308) 40 0.016
42Q39X05:AROK_GEOMG Shikimate kinase - Geobacter metallireducens (... 40 0.020
43Q8FT30:AROK_COREF Shikimate kinase - Corynebacterium efficiens 40 0.027
44Q46WJ3:AROK_RALEJ Shikimate kinase - Ralstonia eutropha (strain ... 39 0.059
45O50467:AROK_NEIGO Shikimate kinase - Neisseria gonorrhoeae 38 0.077
46Q3ZZK9:AROK_DEHSC Shikimate kinase - Dehalococcoides sp. (strain... 37 0.13
47Q2L1Z2:AROK_BORA1 Shikimate kinase - Bordetella avium (strain 197N) 37 0.17
48Q2S9Q5:AROK_HAHCH Shikimate kinase - Hahella chejuensis (strain ... 37 0.22
49Q48PH1:AROK_PSE14 Shikimate kinase - Pseudomonas syringae pv. ph... 36 0.29
50Q87N01:DUSC_VIBPA tRNA-dihydrouridine synthase C - Vibrio paraha... 35 0.50
51Q39KC5:AROK_BURS3 Shikimate kinase - Burkholderia sp. (strain 38... 35 0.65
52Q8XV61:AROK_RALSO Shikimate kinase - Ralstonia solanacearum (Pse... 35 0.85
53Q4JVG1:AROK_CORJK Shikimate kinase - Corynebacterium jeikeium (s... 35 0.85
54Q7N7B0:AROL_PHOLL Shikimate kinase 2 - Photorhabdus luminescens ... 34 1.1
55Q8XHE4:SYI_CLOPE Isoleucyl-tRNA synthetase - Clostridium perfrin... 33 1.9
56Q5LSY0:AROK_SILPO Shikimate kinase - Silicibacter pomeroyi 33 1.9
57Q5YVL0:SYC2_NOCFA Putative cysteinyl-tRNA synthetase 2 - Nocardi... 33 2.5
58Q9DBN5:LONP2_MOUSE Peroxisomal Lon protease homolog 2 - Mus musc... 33 3.2
59Q6G1N9:AROK_BARHE Shikimate kinase - Bartonella henselae (Rochal... 33 3.2
60Q3MIB4:LONP2_RAT Peroxisomal Lon protease homolog 2 - Rattus nor... 32 4.2
61P21249:ANT1_ONCVO Major antigen - Onchocerca volvulus 32 4.2
62Q6A085:ZN629_MOUSE Zinc finger protein 629 - Mus musculus (Mouse) 32 4.3
63P19769:INSK_ECOLI Putative transposase insK for insertion sequen... 32 5.5
64Q2RMW1:AROK_RHORT Shikimate kinase - Rhodospirillum rubrum (stra... 32 5.5
65Q69ZM6:STK36_MOUSE Serine/threonine-protein kinase 36 - Mus musc... 32 7.2
66P63603:AROL_SALTY Shikimate kinase 2 - Salmonella typhimurium 31 9.5
67P63604:AROL_SALTI Shikimate kinase 2 - Salmonella typhi 31 9.5
68Q5PFV5:AROL_SALPA Shikimate kinase 2 - Salmonella paratyphi-a 31 9.5
69Q57SH6:AROL_SALCH Shikimate kinase 2 - Salmonella choleraesuis 31 9.5 
>Q9SJ05:AROK_ARATH Probable shikimate kinase, chloroplast precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 292
 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
 Frame = +3

Query: 288 LLRKTAEAVGDFRKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALA 467
           L RK  E         +Y+VG   + K  + KL++  + Y +   + L+E  + G     
Sbjct: 89  LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 148

Query: 468 AFRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELA 647
            F    E  +   ET+ LK+L+S   +V+  G GAV+   N   +  G+SIW+DVPLE  
Sbjct: 149 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEAL 208

Query: 648 VNDM----LKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYS 815
            + +      S+        D++S A  +L   +D+  E Y  ++  VSL+N+A++ GY 
Sbjct: 209 AHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYK 268

Query: 816 SIDSLSLEDMVVEIVSRIEKLI 881
           ++  L+  ++ +E+   + +L+
Sbjct: 269 NVSDLTPTEIAIEVSQVLSQLL 290
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>Q00497:AROK_SOLLC Shikimate kinase, chloroplast precursor - Solanum lycopersicum|
           (Tomato) (Lycopersicon esculentum)
          Length = 300

 Score = 77.8 bits (190), Expect = 9e-14
 Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 5/208 (2%)
 Frame = +3

Query: 282 VALLRKTAEAVGDFRKTP-IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKD 458
           +  L+  AE V ++     +Y+VG     K  + ++LA ++ Y +   + L+E  +GG  
Sbjct: 88  IETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIEQAVGGIT 147

Query: 459 ALAAFRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPL 638
               F    E  + + ETE L +L+ M  LV+  G GAV+   N   +  G+S+W+DVPL
Sbjct: 148 VAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPL 207

Query: 639 EL----AVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 806
           E        +  KS+        D +   + +L    +   E YA +   VSL+N+A + 
Sbjct: 208 EALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRGENYANASARVSLENIALK- 266

Query: 807 GYSSIDSLSLEDMVVEIVSRIEKLIQAK 890
               +  ++  ++ +E++ +IE  ++ +
Sbjct: 267 REKDVCHITPAEITLEVLIQIENFLKTQ 294
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>Q2JKT7:AROK_SYNJB Shikimate kinase - Synechococcus sp. (strain JA-2-3B'a(2-13))|
           (Cyanobacteria bacterium Yellowstone B-Prime)
          Length = 187

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 47/165 (28%), Positives = 79/165 (47%)
 Frame = +3

Query: 306 EAVGDFRKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESD 485
           E V   R   +Y++G   + K  +   LA  + +++  ++ L+E V GG      F E  
Sbjct: 5   EEVERLRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQV-GGSSIAQIFAEHG 63

Query: 486 EKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLK 665
           E  + ++ET+ L QL+S   LV+  G G V+   N   L HG+++W+DV  EL    + +
Sbjct: 64  EAYFRDLETQVLAQLSSYTRLVIATGGGIVLRPKNWSYLHHGLTVWLDVAPELIWQRLKR 123

Query: 666 SKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVAS 800
             G   +        A+ KL Q  +     YA +DV V +++  S
Sbjct: 124 DPGQRPLLQTPDPQAALYKLMQEREPF---YAQADVRVPIRSETS 165
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>Q31PU5:AROK_SYNP7 Shikimate kinase - Synechococcus sp. (strain PCC 7942) (Anacystis|
           nidulans R2)
          Length = 190

 Score = 72.0 bits (175), Expect = 5e-12
 Identities = 42/151 (27%), Positives = 79/151 (52%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +++VG   + K  I KLLA S+ Y Y+ ++ L+E+V G +     F    E G+ ++ET+
Sbjct: 12  LFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG-RSIPEIFASDGEAGFRQIETQ 70

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 695
            L+++ S   LV+  G G V+   N   L+ G+ IW+DVP+   +  +   +    +   
Sbjct: 71  VLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLEGDQNRPLLQTE 130

Query: 696 DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 788
              +   A   QR    ++RYA +D+ ++++
Sbjct: 131 APATTLQALWEQR----RDRYAQADLRIAIE 157
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>Q5N4D3:AROK_SYNP6 Shikimate kinase - Synechococcus sp. (strain ATCC 27144 / PCC 6301|
           / SAUG 1402/1) (Anacystis nidulans)
          Length = 190

 Score = 72.0 bits (175), Expect = 5e-12
 Identities = 42/151 (27%), Positives = 79/151 (52%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +++VG   + K  I KLLA S+ Y Y+ ++ L+E+V G +     F    E G+ ++ET+
Sbjct: 12  LFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTG-RSIPEIFASDGEAGFRQIETQ 70

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 695
            L+++ S   LV+  G G V+   N   L+ G+ IW+DVP+   +  +   +    +   
Sbjct: 71  VLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLEGDQNRPLLQTE 130

Query: 696 DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 788
              +   A   QR    ++RYA +D+ ++++
Sbjct: 131 APATTLQALWEQR----RDRYAQADLRIAIE 157
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>Q7VE85:AROK_PROMA Shikimate kinase - Prochlorococcus marinus|
          Length = 190

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAA-FRESDEKGYLEVET 512
           IY+VG   + K      LA  + Y ++  ++L+E V   K +++  FRE  E G+ ++ET
Sbjct: 19  IYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEKV--AKSSVSQIFREEGENGFRDIET 76

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAA--AI 686
           + LKQ+    SLV+  G G V  S N G+L  G+ IW+D   EL    +   K      +
Sbjct: 77  QVLKQIGQRHSLVVATGGGLVTRSENWGVLHQGIVIWLDPNRELLFARLKSDKTVVRPLL 136

Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 788
            + D      + ++QRY      YA +D+ +S++
Sbjct: 137 DNKDPKDVLDSLIKQRY----LSYAEADLHISIE 166
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>Q2JRJ6:AROK_SYNJA Shikimate kinase - Synechococcus sp. (strain JA-3-3Ab)|
           (Cyanobacteria bacterium Yellowstone A-Prime)
          Length = 189

 Score = 65.1 bits (157), Expect = 6e-10
 Identities = 44/159 (27%), Positives = 73/159 (45%)
 Frame = +3

Query: 324 RKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLE 503
           R   +Y++G   + K  +   LA  +   +  ++ L+E V G   A   F E  E  + E
Sbjct: 11  RGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQVAGCSIA-QIFAEQGEAHFRE 69

Query: 504 VETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAA 683
           +ET+ L QL+    LV+  G G V+   N   L HG+++W+D   EL    + +  G   
Sbjct: 70  LETQVLAQLSGYTRLVVATGGGIVLRPKNWSYLHHGLTVWLDAAPELIWQRLKRDPGQRP 129

Query: 684 ISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVAS 800
           +        A+ +L Q  +     YA +DV V + + AS
Sbjct: 130 LLQTPDPQAALQRLMQEREPF---YAQADVRVPIHSEAS 165
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>Q46HR4:AROK_PROMT Shikimate kinase - Prochlorococcus marinus (strain NATL2A)|
          Length = 198

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 38/153 (24%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESD-EKGYLEVET 512
           I+++G   + K     +LA  I Y ++ ++D++E     K ++++  E D EK + +VE 
Sbjct: 19  IFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKA--SKQSISSIFEKDGEKVFRDVEK 76

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
           + LK+++   SLV+  G G V    N G+L  G+ IW+D+ L  ++  +        +  
Sbjct: 77  KVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDHKRRPLLL 136

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQN 791
            D+ ++  +++   Y+  K  Y  SD+ + +++
Sbjct: 137 GDNLAENFSQI---YESRKPIYLESDLRIEVED 166
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>Q8YXG9:AROK_ANASP Shikimate kinase - Anabaena sp. (strain PCC 7120)|
          Length = 181

 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 34/133 (25%), Positives = 64/133 (48%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y++G     K  +  LLA  + Y +L +++++      K     F E+ E G+ ++E++
Sbjct: 10  LYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATK-KSINEIFAEAGEAGFRQIESD 68

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 695
            L Q+ S   L +  G G V+   N   L HG+ +W+DVP+++    +        + D 
Sbjct: 69  VLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLILWLDVPVDILYARLAADTTRPLLQDD 128

Query: 696 DSFSQAMAKLRQR 734
           D   +  + L QR
Sbjct: 129 DPKGKLRSLLEQR 141
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>P72796:AROK_SYNY3 Shikimate kinase - Synechocystis sp. (strain PCC 6803)|
          Length = 189

 Score = 62.0 bits (149), Expect = 5e-09
 Identities = 43/151 (28%), Positives = 72/151 (47%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           ++++G   + K  +  LLA  + YR+  ++ L+E V  GK     F E  E  + ++ETE
Sbjct: 15  LFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIERV-AGKAIADIFAEDGEDTFRDLETE 73

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 695
            L  L +    V+  G G V+   N   L HG+ IW+D  LEL +   L+   A  +   
Sbjct: 74  VLGHLAAQTRSVIATGGGVVLRRQNWSYLHHGLVIWLDGSLELLL-ARLQGDEARPLLQV 132

Query: 696 DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 788
           ++  + +  L  +   L   YA +D+   LQ
Sbjct: 133 ENLEERLGNLLAQRQPL---YAQADLRFPLQ 160
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>Q3MFQ9:AROK_ANAVT Shikimate kinase - Anabaena variabilis (strain ATCC 29413 / PCC|
           7937)
          Length = 181

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 33/133 (24%), Positives = 63/133 (47%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y++G     K  +  LLA  + Y +L +++++      K     F E+ E G+ ++E++
Sbjct: 10  LYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQA-AKKSINEIFAEAGEAGFRQIESD 68

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDP 695
            L Q+ S   L +  G G V+   N   L HG+ +W+DV +++    +        + D 
Sbjct: 69  VLAQVCSYTKLTVATGGGIVLRRENWSYLHHGLIVWLDVSVDILYARLAADTTRPLLQDD 128

Query: 696 DSFSQAMAKLRQR 734
           D   +  + L QR
Sbjct: 129 DPKGKLRSLLEQR 141
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>Q7NH27:AROK_GLOVI Shikimate kinase - Gloeobacter violaceus|
          Length = 177

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y+VG   + K  + +LLA  + Y ++  + L+E V  GK     F    E  + ++E+ 
Sbjct: 7   LYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQV-SGKRVGEIFEREGEAVFRDLESR 65

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGA-AAISD 692
            L ++++   LV+  G G V+   N G L HGV +W+D  +E  +  +    G    ++ 
Sbjct: 66  VLAEVSAYTRLVVATGGGVVLARRNWGYLHHGVVVWLDADIETLLGRVEHEPGTRPLLAG 125

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVS 782
            D   + +  L +R       YA +DV VS
Sbjct: 126 GDRHLRLVELLGER----ARLYAQADVRVS 151
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>Q7U469:AROK_SYNPX Shikimate kinase - Synechococcus sp. (strain WH8102)|
          Length = 191

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y+VG   + K +  + LA  + Y ++ ++ ++E    G      F    E G+  +E++
Sbjct: 17  LYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQA-AGCSIPEIFERDGEAGFRALESQ 75

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAI--- 686
            L  +    SLV+  G G V    N GLL  G+ +W+DV  E  +  +        +   
Sbjct: 76  VLNAIGQRHSLVVATGGGVVTQQENWGLLHSGIVVWLDVVPEQLMQRLRADSTVRPLLQT 135

Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTV 779
            DPD+   A+  L QR    +  YA +D+TV
Sbjct: 136 EDPDAALNAL--LNQR----RPLYAEADLTV 160
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>Q8DKH7:AROK_SYNEL Shikimate kinase - Synechococcus elongatus (Thermosynechococcus|
           elongatus)
          Length = 183

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 49/101 (48%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           IY+VG     K    +LLA  + Y ++   D +      +     F +  E  + E+E +
Sbjct: 12  IYLVGMMGAGKTTTGRLLAQRLGYSFV-DTDAVITAFRQRPIREIFAQEGEPAFRELEQQ 70

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPL 638
            L Q++S   LV+  G G V+N  N   L HG+ +W+ VPL
Sbjct: 71  VLAQVSSYHHLVVATGGGIVLNPMNWSYLHHGIVVWLHVPL 111
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>Q3AH55:AROK_SYNSC Shikimate kinase - Synechococcus sp. (strain CC9605)|
          Length = 199

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y+VG   + K +  + LA  + Y ++ ++ ++E    G      F    + G+  +E++
Sbjct: 25  LYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQA-AGCSIPEIFERDGDAGFRSLESQ 83

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWID-VPLELAVNDMLKSKGAAAISD 692
            L  ++   SLV+  G G V    N GLL  G+ IW+D VP +L       S     +  
Sbjct: 84  VLSAISQRHSLVVATGGGVVTQPENWGLLHSGIVIWLDVVPDQLLQRLNADSTVRPLLQT 143

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQN 791
            D  +   A L +R    +  Y+ +D+TV + +
Sbjct: 144 TDPEASLNALLNER----RPLYSEADLTVVIND 172
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>Q7V904:AROK_PROMM Shikimate kinase - Prochlorococcus marinus (strain MIT 9313)|
          Length = 192

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 28/98 (28%), Positives = 51/98 (52%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           +Y+VG   + K +  + LA  + Y ++ ++ ++E  L G+     F E  E G+  +E++
Sbjct: 19  LYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQ-LAGQPIPKIFSEEGEAGFRTMESQ 77

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWID 629
            L  +    SLV+  G G V    N G+L  G+ IW++
Sbjct: 78  VLNAIGQRHSLVVATGGGIVSKPENWGVLHQGIVIWLN 115
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>Q3B009:AROK_SYNS9 Shikimate kinase - Synechococcus sp. (strain CC9902)|
          Length = 191

 Score = 51.6 bits (122), Expect = 7e-06
 Identities = 28/99 (28%), Positives = 50/99 (50%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           IY++G   + K +  + LA  + Y ++ ++ ++E V  G      F    E G+  +E++
Sbjct: 17  IYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQV-AGCTIPEIFERDGEAGFRSIESQ 75

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 632
            L  ++   SLV+  G G V    N G L  G+ +W+DV
Sbjct: 76  VLNAISQRHSLVVATGGGVVTKPENWGQLHSGIVVWLDV 114
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>Q5QV48:AROK_IDILO Shikimate kinase - Idiomarina loihiensis|
          Length = 177

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
 Frame = +3

Query: 327 KTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEV 506
           K  I++VG     K  I + +A  +   +  S+  +E   G + +   F    E+G+   
Sbjct: 4   KRNIFLVGPMGAGKSTIGRQIARQLHLEFYDSDSEIERRTGAEISWV-FELEGEEGFRAR 62

Query: 507 ETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKGAAA 683
           E + +++LT    +VL  G G+VM+  +   L   GV +++  P+E  +    + K    
Sbjct: 63  EEKVIEELTENMGIVLATGGGSVMSKESRNRLSARGVVVYLKTPIEKQLARTQRDKRRPL 122

Query: 684 ISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVS 863
           I++ +   + + +L Q  D L E   ++D+TV              D  S + +V +I+ 
Sbjct: 123 IAEAEDPRKVLEELAQERDPLYEE--IADITV------------QTDEQSAKFVVNDIIE 168

Query: 864 RIEKL 878
           ++E +
Sbjct: 169 QLESI 173
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>O67925:AROK_AQUAE Shikimate kinase - Aquifex aeolicus|
          Length = 168

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 35/151 (23%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLG--GKDALAAFRESDEKGYLEVE 509
           IY++G  C+ K  +  LL+ S+   +    D+ E+V    G      F +  E  + ++E
Sbjct: 3   IYLIGFMCSGKSTVGSLLSRSLNIPFY---DVDEEVQKREGLSIPQIFEKKGEAYFRKLE 59

Query: 510 TEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKGAAAI 686
            E LK L+   ++V+  G G   N   L  ++  G +++ID+P E+ +     SK    +
Sbjct: 60  FEVLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKDSKERPLL 119

Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTV 779
             P      + +++  +++ ++ Y+ +D+ V
Sbjct: 120 KRP------LDEIKNLFEERRKIYSKADIKV 144
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>Q31DP8:AROK_THICR Shikimate kinase - Thiomicrospira crunogena (strain XCL-2)|
          Length = 174

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I++VG     K  + + LA+ + Y++L S+ ++ED  G    +  F    E G+   E  
Sbjct: 6   IFLVGPMGAGKSTVGRFLADKLHYQFLDSDQVIEDKTGATIPM-IFDIEGESGFRAREKA 64

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            +  LT    +VL  G GA++N  N   LR  G  +++   ++  V      +    +  
Sbjct: 65  AIDDLTQQSEIVLATGGGAILNPENRKNLRSRGFVVYLKSSVDSLVQRTRHDRNRPLL-Q 123

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVA 797
            ++  Q + KL +    L E   V+D+ +  + V+
Sbjct: 124 TENPEQVLRKLIEERGPLYEE--VADLVIQTEQVS 156
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>Q98FY0:AROK_RHILO Shikimate kinase - Rhizobium loti (Mesorhizobium loti)|
          Length = 203

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 1/160 (0%)
 Frame = +3

Query: 303 AEAVGDFRKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRES 482
           A  +G      I  VG     K  I + +A  +   ++ S+  +E V         F   
Sbjct: 14  AALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESV-SRMTVPELFERY 72

Query: 483 DEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNS-TNLGLLRHGVSIWIDVPLELAVNDM 659
            E  +  +E   + ++   G  VL  G GA MN+ T   +  HGVS+W+   L+L ++ +
Sbjct: 73  GEAEFRALEQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVWLKAELDLLMDRV 132

Query: 660 LKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTV 779
            K +    +   D  +     + +RY      YA SDVTV
Sbjct: 133 SKKQNRPLLKSADPRAVLERLMSERY----PVYATSDVTV 168
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>Q2RI74:AROK_MOOTA Shikimate kinase - Moorella thermoacetica (strain ATCC 39073)|
          Length = 173

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I ++G   + K  + +LLA  + + +L ++ ++E+ LG       F    E+ + EVE E
Sbjct: 5   IVLIGFMGSGKTTVGRLLARDLGWSFLDTDTMVEERLG-LPVKEIFAREGEEFFREVEKE 63

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVS-IWIDVPLELAV 650
            + ++ +    V+  G GAV+   N+ LLR G   +W+ V  E A+
Sbjct: 64  AVARVATARQAVIATGGGAVLCGVNVKLLREGNKVVWLQVRPETAL 109
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>Q6NH03:AROK_CORDI Shikimate kinase - Corynebacterium diphtheriae|
          Length = 173

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG   + K  I + LAN++    + S+ L+E  L GK     F E  E  + ++E E
Sbjct: 9   VVLVGPPGSGKTTIGRRLANALNTSVVDSDVLIEQ-LQGKPCGVVFAELGEPNFRDLEAE 67

Query: 516 GLK-QLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAV--NDMLKSKGAAAI 686
            +   LT+ G  V+  G GAV   +    LR  + +W+DV     V    +  S+     
Sbjct: 68  VIDFALTTAG--VVSLGGGAVTTESVRQKLRAQIVVWVDVSAAEGVRRTAVENSRPLLDT 125

Query: 687 SDP-DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGY 812
           ++P + +S+ +A+ R  Y ++ +  A +D     Q VA  LG+
Sbjct: 126 TNPLERYSELLAQRRDFYKEVADYRAHTDGRSPQQIVADILGF 168
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>Q8KCL0:AROK_CHLTE Shikimate kinase - Chlorobium tepidum|
          Length = 191

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 5/188 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I++ G   + K  I  LLANS+ + ++  +  +E +  GK     F E  E  +  +E  
Sbjct: 7   IFLTGFSGSGKSTIGPLLANSLGFEFIDLDREIE-LTAGKSINRIFAEDGEAAFRSLELR 65

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            L+++     +V+  G G + N     L+R HG  I++    E+    +        +  
Sbjct: 66  TLEKIGQQERMVVSLGGGVLENDRCFELIRSHGTLIYLKSSPEILTLRLQHKTDRPLLKG 125

Query: 693 PDSFSQAMAKLRQRYDDL----KERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIV 860
           PD       +++QR  +L    + RY  +D+ +              DS  +   V E+ 
Sbjct: 126 PDGRKLTREEIQQRIAELLKKREPRYLKADLVL------------FTDSKKIGASVEELT 173

Query: 861 SRIEKLIQ 884
            +IE+ I+
Sbjct: 174 RKIERHIR 181
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>Q9X5D1:AROK_CORGL Shikimate kinase - Corynebacterium glutamicum (Brevibacterium|
           flavum)
          Length = 169

 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I + LA ++    + S++L+E   G K   A F E  E  + E+E  
Sbjct: 6   VVLVGLPGAGKSTIGRRLARALNTELVDSDELIERATG-KACGAVFSELGEPAFRELEAI 64

Query: 516 GLKQ-LTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDML--KSKGAAAI 686
            + + L S G  V+  G G+V+  +   LL+    +WIDVP+E  +      +S+     
Sbjct: 65  HVAEALKSSG--VVSLGGGSVLTESTRELLKGQDVVWIDVPVEEGIRRTANERSRPVLQA 122

Query: 687 SDPDSFSQAMAKLR-QRYDDLKERYAVSDVTVSLQNVASQLGYSSID 824
           +DP    + + K+R   Y+++      ++     Q VA+ L +  ID
Sbjct: 123 ADPAEHYRNLVKVRTPLYEEVATYRLRTNNRSPQQVVAAVLHHLEID 169
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>Q3AR93:AROK_CHLCH Shikimate kinase - Chlorobium chlorochromatii (strain CaD3)|
          Length = 190

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 5/192 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I++ G   + K  I  LLANS+ Y ++  + L+E    GK     F E+ E  + + E +
Sbjct: 8   IFLTGFSGSGKSTIGPLLANSLGYEFVDLDALIEREC-GKSINQIFAEAGEAAFRQHEEQ 66

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRH-GVSIWIDVPLELAVNDMLKSKGAAAISD 692
            L+ L      V+  G G +       L+R  G  +++  P++     +        +  
Sbjct: 67  TLETLLMRRKTVVSLGGGVLEQPRAFELVRQAGTVVYLKSPVKTLARRLSNKTDRPLLKG 126

Query: 693 PDSFSQAMAKLRQRYDDL----KERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIV 860
                 +  ++ Q+  +L    + RY  +D+TV              D+  +   V E+ 
Sbjct: 127 EQGEKLSQEEIEQKIAELLARREPRYECADITV------------ETDAKRIGSTVEELT 174

Query: 861 SRIEKLIQAKAM 896
            +IE+ ++  A+
Sbjct: 175 RKIERYMRTLAL 186
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>Q6F7E4:AROK_ACIAD Shikimate kinase - Acinetobacter sp. (strain ADP1)|
          Length = 180

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           IY+VG     K  + + LA  +   +L S+  +E   G       F +  E G+   ET 
Sbjct: 12  IYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERRTGATIPWI-FEKEGEIGFRSRETI 70

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLKSKG--AAAI 686
            L  LTS   LVL  G G V    N   L+  GV +++  P+EL +    + K      +
Sbjct: 71  VLDDLTSRRDLVLATGGGVVTQPANRSYLKTRGVVVYLYTPVELQLQRTYRDKNRPLLQV 130

Query: 687 SDPDSFSQAMAKLR 728
            +P+   + + KLR
Sbjct: 131 ENPEQRLRDLLKLR 144
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>Q3B316:AROK_PELLD Shikimate kinase - Pelodictyon luteolum (strain DSM 273)|
           (Chlorobium luteolum (strain DSM 273))
          Length = 202

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 6/201 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I++ G   + K  I  LLANS+ Y +L  +  +E    GK     F E  E  + E+E +
Sbjct: 13  IFLTGFSGSGKSTIGPLLANSLGYEFLDVDQAVEQ-RAGKPITRIFAEEGEAAFRELELQ 71

Query: 516 GLKQLTSMGSLVLCCGDGAVM-NSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            LK +     +V+  G GA+  + ++  +   G  +++          ++  +    +  
Sbjct: 72  TLKTVAGEKEMVVSLGGGALQYDPSHAFIAGAGTLVYLKSSAANLAKRLVNKRDRPLLRG 131

Query: 693 PD----SFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIV 860
            +    S  +   K+R+  ++ + RY  + +TV              D   +   V E+ 
Sbjct: 132 ENGRKHSREELEEKIRRILEEREPRYQQAALTV------------QTDQKRIGSTVEELT 179

Query: 861 SRIEKLI-QAKAMMEAAGKPE 920
            +IE+L+ +A  + E   +PE
Sbjct: 180 RKIERLVRKAPQIGEDGQQPE 200
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>Q6LVF6:AROK_PHOPR Shikimate kinase - Photobacterium profundum (Photobacterium sp.|
           (strain SS9))
          Length = 175

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
 Frame = +3

Query: 327 KTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEV 506
           K  I++VG     K  I + LA  +   +  S+ ++ED  G  D    F    E+G+   
Sbjct: 7   KRNIFLVGPMGAGKSTIGRHLAQQLHMEFFDSDTVIEDRTGA-DISWVFDVEGEEGFRVR 65

Query: 507 ETEGLKQLTSMGSLVLCCGDGAVMNSTNLG-LLRHGVSIWIDVPLE--LAVNDMLKSKGA 677
           E   +  LT    +VL  G G+V++  N   L   GV ++++  +E  LA     K +  
Sbjct: 66  EEGVIDDLTQEQGIVLATGGGSVVSKENRNRLSARGVVVYLETTIEKQLARTQRDKKRPL 125

Query: 678 AAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 806
                P    +A+A  R    +    Y V     S + VA+Q+
Sbjct: 126 LQTDAPREVLEALAAERNPMYEEVSDYVVRTDDQSAKVVANQI 168
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>P63600:AROK_NEIMB Putative shikimate kinase - Neisseria meningitidis serogroup B|
          Length = 170

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + ++G     K  + + +A  + YR+  S+  +     G      F    E+G+   ET 
Sbjct: 8   LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIA-AAAGVPIPTIFEMEGEQGFRSRETA 66

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDML--KSKGAAAI 686
            LK+L  +  +VL  G GAV+   N  L+R  G  +++  P E  +       S+    +
Sbjct: 67  ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRCDNSRPLLQV 126

Query: 687 SDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 791
           +DP      +AKLR+ Y      Y   +D TV   N
Sbjct: 127 ADP------LAKLRELYAARDPVYRQTADFTVESAN 156
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>P63599:AROK_NEIMA Putative shikimate kinase - Neisseria meningitidis serogroup A|
          Length = 170

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + ++G     K  + + +A  + YR+  S+  +     G      F    E+G+   ET 
Sbjct: 8   LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIA-AAAGVPIPTIFEMEGEQGFRSRETA 66

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDML--KSKGAAAI 686
            LK+L  +  +VL  G GAV+   N  L+R  G  +++  P E  +       S+    +
Sbjct: 67  ILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRCDNSRPLLQV 126

Query: 687 SDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 791
           +DP      +AKLR+ Y      Y   +D TV   N
Sbjct: 127 ADP------LAKLRELYAARDPVYRQTADFTVESAN 156
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>Q3Z991:AROK_DEHE1 Shikimate kinase - Dehalococcoides ethenogenes (strain 195)|
          Length = 176

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
 Frame = +3

Query: 327 KTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEV 506
           K  I ++G     K +++KLL+  +  + L S D   +   G   ++ F+E  E  + ++
Sbjct: 4   KNNIALIGFMGAGKSSVSKLLSERL-GKTLVSTDACIETREGLSIISIFKEKGEDYFRQM 62

Query: 507 ETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDM---LKSKGA 677
           E+  L+ L      ++ CG G VM   NL L+R    +   + LE    D+   LK+   
Sbjct: 63  ESRVLEDLCRQSGQIIDCGGGIVMRPPNLSLMRLNCLV---IYLESRPEDLEARLKNHTN 119

Query: 678 AAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQN 791
             + + +   + +  L  R   L    A +++T+S  N
Sbjct: 120 RPLYNAERLDKMLKLLESR---LPLYRAAANITISTHN 154
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>Q67N09:AROK_SYMTH Shikimate kinase - Symbiobacterium thermophilum|
          Length = 174

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 4/184 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I +VG   + K  + +LLA  +  R     D L +   G+     F    E+G+   E E
Sbjct: 3   IVLVGLMGSGKTAVGRLLAERL-GRPFVDTDRLVEADAGRTVADIFAAEGEEGFRRREAE 61

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRH-GVSIWIDVPLELAVNDMLKSKG---AAA 683
            + +  +  + V+  G GAV+ + N   LR  G  IW+D   E  + D  + +G      
Sbjct: 62  VVARAAAGDNQVIATGGGAVLRTENREALRRTGFVIWLDAEPE-TLYDRARGQGLHRRPL 120

Query: 684 ISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVS 863
           +S PD   +  A    R     +   V   T               D  SL+D+V EI+ 
Sbjct: 121 LSGPDPLGRLRALAAARRPFYAQAAHVRICT---------------DRRSLQDVVAEIME 165

Query: 864 RIEK 875
           ++++
Sbjct: 166 KLQE 169
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>Q2YBB2:AROK_NITMU Shikimate kinase - Nitrosospira multiformis (strain ATCC 25196 /|
           NCIMB 11849)
          Length = 195

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 27/108 (25%), Positives = 56/108 (51%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I++VG     K  + +LL++ +   +  S+  ++   G       F    E+G+   ETE
Sbjct: 26  IFLVGMMGAGKTTVGRLLSHFLEKTFYDSDREIQKRTG-VSIPTIFEIEGEEGFRRRETE 84

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDM 659
            L +L +  +++L  G GAV++  N  +L+HG ++   + L  +++D+
Sbjct: 85  ILSELMNARNIILATGGGAVLSGVNRAMLKHGGTV---IYLRASIDDL 129
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>Q5FAD3:AROK_NEIG1 Shikimate kinase - Neisseria gonorrhoeae (strain ATCC 700825 / FA|
           1090)
          Length = 170

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + ++G     K  + + +A  + YR+  S+  +     G      F    E+G+   ET 
Sbjct: 8   LILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIA-AAAGVPIPTIFEMEGEQGFRSRETA 66

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDML--KSKGAAAI 686
            LK+L  +  +VL  G GAV+   N  L+R  G  +++  P E  +       S+    +
Sbjct: 67  ILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETLLERTRCDNSRPLLQV 126

Query: 687 SDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 791
           +DP      +AKLR+ Y      Y   +D TV   N
Sbjct: 127 ADP------LAKLRELYAARDPVYRQTADFTVESAN 156
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>Q74BL5:AROK_GEOSL Shikimate kinase - Geobacter sulfurreducens|
          Length = 175

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + + G     K  + KLLA  + YR+   + L+ +   G      F    E+ + E+ETE
Sbjct: 10  VVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVE-RAGISINEIFERYGEQRFRELETE 68

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRH-GVSIWIDVPLELAVNDMLKSKGAAAISD 692
            ++ L  +   V+  G GAV+   N  LLR  G+ + +   LE+ ++  LK      +  
Sbjct: 69  AIRSLGGVSGRVVATGGGAVIAPRNRVLLREAGLVVNLTASLEVILS-RLKGDRERPLLK 127

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIE 872
            ++  +A+A L    ++    YA +D+ +                 S+ED+V EI + + 
Sbjct: 128 SNNTPEALAALMTAREN---AYADADLRIDTA------------GKSVEDVVTEIATFVR 172

Query: 873 K 875
           +
Sbjct: 173 E 173
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>Q82TC0:AROK_NITEU Shikimate kinase - Nitrosomonas europaea|
          Length = 211

 Score = 41.6 bits (96), Expect = 0.007
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           I ++G   + K  + KLLAN +   ++  +  ++   G       F    E G+ + E+E
Sbjct: 29  IILIGMMGSGKTTVGKLLANLVGKTFIDIDHEIQRRTG-VGIPVIFEIEGEAGFRKRESE 87

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPL 638
            L+ +    ++VL  G GA+++  N  LLR HG  +++  P+
Sbjct: 88  VLRDIVRQQNIVLATGGGAILHPDNRALLRQHGTVVYLCAPV 129
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>Q83AJ3:AROK_COXBU Shikimate kinase - Coxiella burnetii|
          Length = 179

 Score = 40.8 bits (94), Expect = 0.012
 Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 18/177 (10%)
 Frame = +3

Query: 330 TPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVE 509
           T IY++G     K ++   LA  +  R L   D   +   G D    F    E G+   E
Sbjct: 6   TNIYLIGLMGAGKTSVGSQLAK-LTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRRE 64

Query: 510 TEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRH-GVSIWIDV-----------------P 635
            E ++ L  + +++L  G G V++  N   +   GV I++                   P
Sbjct: 65  REMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQKGEMRRP 124

Query: 636 LELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 806
           L +  N   K +    I  P    QAMA L    DDL  R   + + V ++   S L
Sbjct: 125 LFIKNNSKEKLQQLNEIRKP--LYQAMADLVYPTDDLNPRQLATQILVDIKQTYSDL 179
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>Q8FY59:AROK_BRUSU Shikimate kinase - Brucella suis|
          Length = 200

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I + +AN +   +  ++  +E V         F    E  + ++E  
Sbjct: 26  VVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIETV-SRMTVAELFEAYGEVEFRDLERR 84

Query: 516 GLKQLTSMGSLVLCCGDGAVMNS-TNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            + +L   G +VL  G GA MN+ T   +   G+SIWI+  L++ +  + + +    + +
Sbjct: 85  VILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDVLMERVSRRQNRPLLRN 144

Query: 693 PDSFSQAMAKLRQRY 737
            D        + +RY
Sbjct: 145 SDPRGVMQRLMDERY 159
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>Q57AM8:AROK_BRUAB Shikimate kinase - Brucella abortus|
          Length = 200

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I + +AN +   +  ++  +E V         F    E  + ++E  
Sbjct: 26  VVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIETV-SRMTVAELFEAYGEVEFRDLERR 84

Query: 516 GLKQLTSMGSLVLCCGDGAVMNS-TNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            + +L   G +VL  G GA MN+ T   +   G+SIWI+  L++ +  + + +    + +
Sbjct: 85  VILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDVLMERVSRRQNRPLLRN 144

Query: 693 PDSFSQAMAKLRQRY 737
            D        + +RY
Sbjct: 145 SDPRGVMQRLMDERY 159
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>Q2YR42:AROK_BRUA2 Shikimate kinase - Brucella abortus (strain 2308)|
          Length = 200

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I + +AN +   +  ++  +E V         F    E  + ++E  
Sbjct: 26  VVLVGLMGAGKSTIGRKVANMLNLPFKDADTEIETV-SRMTVAELFEAYGEVEFRDLERR 84

Query: 516 GLKQLTSMGSLVLCCGDGAVMNS-TNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            + +L   G +VL  G GA MN+ T   +   G+SIWI+  L++ +  + + +    + +
Sbjct: 85  VILRLLDDGPMVLATGGGAYMNAETRAAIAEAGISIWINADLDVLMERVSRRQNRPLLRN 144

Query: 693 PDSFSQAMAKLRQRY 737
            D        + +RY
Sbjct: 145 SDPRGVMQRLMDERY 159
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>Q39X05:AROK_GEOMG Shikimate kinase - Geobacter metallireducens (strain GS-15 / ATCC|
           53774 / DSM 7210)
          Length = 168

 Score = 40.0 bits (92), Expect = 0.020
 Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + + G     K ++ +LLA+ + +RY C  D L     G      F    E  +  +ETE
Sbjct: 4   VILTGFMGTGKSSVGRLLAHRLGFRY-CDLDALIVEGEGVSINEIFARHGEPHFRALETE 62

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRH-GVSIWIDVPLELAVNDMLKSKGAAAISD 692
            ++ ++     V+  G GAV++  N  LLR  GV + +   +E     + +      + D
Sbjct: 63  AVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLLKD 122

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIE 872
             S  +  A + +R    ++ YA +++ +                 S+ED+V EI   +E
Sbjct: 123 DRSGERIAAMMAER----EQFYADAELRI------------DTTGKSVEDVVAEITGYLE 166
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>Q8FT30:AROK_COREF Shikimate kinase - Corynebacterium efficiens|
          Length = 169

 Score = 39.7 bits (91), Expect = 0.027
 Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I + LA ++    + S++L+E   G K     F E  E  + E+E  
Sbjct: 6   VVLVGPPGAGKSTIGRRLARALNADLVDSDELIEKATG-KACGEVFSELGEPAFRELEAH 64

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDML--KSKGAAAIS 689
            + +  +   +V   G GA++  +   LLR    +WIDV +   V      +++   A  
Sbjct: 65  HVAEALNHDGVV-SLGGGAILTESTRELLREHDVVWIDVSVAEGVRRTAGERTRPVLAAD 123

Query: 690 DPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 806
           DP    + + + R+   +    + V   + S Q V +++
Sbjct: 124 DPVEHYRNLLETRRPLYEEVSTFRVRTNSRSPQQVVAEI 162
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>Q46WJ3:AROK_RALEJ Shikimate kinase - Ralstonia eutropha (strain JMP134) (Alcaligenes|
           eutrophus)
          Length = 192

 Score = 38.5 bits (88), Expect = 0.059
 Identities = 24/90 (26%), Positives = 43/90 (47%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           ++ VG     K  + + +A  + Y +  S+  LE   G +  +  F    E+G+ + E  
Sbjct: 8   LFFVGLMGAGKTTVGRTVARRLHYPFFDSDHELEAHCGVRIPVI-FEHEGEEGFRDREAA 66

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR 605
            +++LT    +VL  G GAV+   N  LL+
Sbjct: 67  MIRELTGRSGIVLATGGGAVLRPENRELLK 96
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>O50467:AROK_NEIGO Shikimate kinase - Neisseria gonorrhoeae|
          Length = 134

 Score = 38.1 bits (87), Expect = 0.077
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
 Frame = +3

Query: 471 FRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELA 647
           F    E+G+   ET  LK+L  +  +VL  G GAV+   N  L+R  G  +++  P E  
Sbjct: 16  FEMEGEQGFRSRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVVYLHAPPETL 75

Query: 648 VNDML--KSKGAAAISDPDSFSQAMAKLRQRYDDLKERY-AVSDVTVSLQN 791
           +       S+    ++DP      +AKLR+ Y      Y   +D TV   N
Sbjct: 76  LERTRCDNSRPLLQVADP------LAKLRELYAARDPVYRQTADFTVESAN 120
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>Q3ZZK9:AROK_DEHSC Shikimate kinase - Dehalococcoides sp. (strain CBDB1)|
          Length = 176

 Score = 37.4 bits (85), Expect = 0.13
 Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
 Frame = +3

Query: 327 KTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEV 506
           K  I ++G     K +I+KLL+  +  + L S D   +   G      F+E+ E  + ++
Sbjct: 4   KNNIALIGFMGAGKSSISKLLSEKL-GKPLVSTDACIETREGLSISHIFKENGEDYFRQM 62

Query: 507 ETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDM---LKSKGA 677
           E++ L+ +    + ++ CG G V    NL ++R    +   V LE    D+   LK+   
Sbjct: 63  ESKVLEDICQNPNQIIDCGGGIVTRPHNLSIMRLNCLV---VYLESRPEDLENRLKNHTN 119

Query: 678 AAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQN 791
             + + +   + +  L  R    ++    +D+TVS  N
Sbjct: 120 RPLFNAERSDKMLKLLESRLPLYRD---AADITVSTHN 154
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>Q2L1Z2:AROK_BORA1 Shikimate kinase - Bordetella avium (strain 197N)|
          Length = 209

 Score = 37.0 bits (84), Expect = 0.17
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +3

Query: 333 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 512
           PI++VG     K  I + LA ++   ++  +  LE   G +  +  F    E G+ + E+
Sbjct: 39  PIFLVGMMGAGKTTIGRGLARALGREFIDLDHELEARCGVRVPVI-FEIEGEAGFRKRES 97

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWI 626
             L++ T    ++L  G GAV+   N  LLR  G+ +++
Sbjct: 98  TALQECTQRRGIILATGGGAVLAEENRRLLRERGIVLYL 136
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>Q2S9Q5:AROK_HAHCH Shikimate kinase - Hahella chejuensis (strain KCTC 2396)|
          Length = 192

 Score = 36.6 bits (83), Expect = 0.22
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
 Frame = +3

Query: 327 KTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEV 506
           K  + +VG     K  I KLLA  + + ++ S+  +E    G D    F    E G+   
Sbjct: 17  KKNVVLVGPMGTGKTTIGKLLAKELQFEFVDSDREIE-ARCGADIPWIFDVEGEVGFRGR 75

Query: 507 ETEGLKQLTSMGSLVLCCGDGAVMNSTN-LGLLRHGVSIWIDVPLELAVNDMLKSKGAAA 683
           E   +  L+   ++V+  G GAV++  N + L  +G  +++   +E       K +    
Sbjct: 76  EKSVIADLSQRDAVVIATGGGAVVDPDNQIALKENGFIVYLHTSVEQQYQRTRKDRKRPL 135

Query: 684 ISDPDSFS 707
           +   D  S
Sbjct: 136 LRSEDPLS 143
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>Q48PH1:AROK_PSE14 Shikimate kinase - Pseudomonas syringae pv. phaseolicola (strain|
           1448A / Race 6)
          Length = 172

 Score = 36.2 bits (82), Expect = 0.29
 Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  I +LLA  +   +  S+  +E +  G +    F +  E G+ E E  
Sbjct: 4   LILVGPMGAGKSTIGRLLAKELRLPFKDSDKEIE-LRTGANIPWIFDKEGEPGFREREQA 62

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVS-IWIDVPLELAVNDMLKSKGAAAISD 692
            + +L     LVL  G GAVM   N   LR G   +++   +E  V    + +    +  
Sbjct: 63  MIAELCEADGLVLATGGGAVMRGENRQALRAGGRVVYLHASIEQQVGRTARDRNRPLLRT 122

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIE 872
            D  ++ +++L    D L     ++DV +       ++            +V+EI++R+ 
Sbjct: 123 ADP-ARVLSELLAIRDPLYRE--IADVVIETDERPPRM------------VVLEILARLA 167

Query: 873 KL 878
           +L
Sbjct: 168 EL 169
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>Q87N01:DUSC_VIBPA tRNA-dihydrouridine synthase C - Vibrio parahaemolyticus|
          Length = 322

 Score = 35.4 bits (80), Expect = 0.50
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +3

Query: 525 QLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISDPDSF 704
           + T + SL++C G   + N  N+    H   +W DV   L      + KG   +  P+  
Sbjct: 214 ETTGVDSLMVCRGAFNIPNLGNMVKHNHTPMVWSDVVDLLIYYSKFEMKGDKGLYYPNRV 273

Query: 705 SQAMAKLRQRYDDLKERY 758
            Q  A LRQ Y +  E +
Sbjct: 274 KQWFAYLRQSYPEANELF 291
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>Q39KC5:AROK_BURS3 Shikimate kinase - Burkholderia sp. (strain 383) (Burkholderia|
           cepacia (strain ATCC 17760 / NCIB 9086 / R18194))
          Length = 184

 Score = 35.0 bits (79), Expect = 0.65
 Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           ++ VG     K  + + +A  +   +  S+  +E   G +  +  F    E G+ + ET+
Sbjct: 10  VFFVGLMGAGKTTVGRAVARRLDRTFFDSDHEIEARTGARIPVI-FEMEGEAGFRDRETQ 68

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWI 626
            +  LT   ++VL  G GAV+   N   L+ +G+ +++
Sbjct: 69  VITDLTQRENIVLATGGGAVLRPENRDCLKNNGIVVYL 106
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>Q8XV61:AROK_RALSO Shikimate kinase - Ralstonia solanacearum (Pseudomonas|
           solanacearum)
          Length = 190

 Score = 34.7 bits (78), Expect = 0.85
 Identities = 22/90 (24%), Positives = 42/90 (46%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           ++ VG     K  + + +A  +   +  S+  +E   G +  +  F    E G+ + ET+
Sbjct: 6   VFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEIEARCGVRVPVI-FEHEGEMGFRDRETQ 64

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR 605
            + +LT+   +V+  G GAV+   N   LR
Sbjct: 65  MIDELTARHGVVVATGGGAVLRPENRAFLR 94
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>Q4JVG1:AROK_CORJK Shikimate kinase - Corynebacterium jeikeium (strain K411)|
          Length = 185

 Score = 34.7 bits (78), Expect = 0.85
 Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
 Frame = +3

Query: 342 IVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLG-------GKDALAAFRESDEKGYL 500
           +VG   + K  I K LAN++  + + ++ +LE  LG       G+    AFRE +     
Sbjct: 7   LVGLPGSGKTTIGKRLANALNLQLVDTDHMLEKKLGKTCNQIMGELGEPAFREQEAIVVA 66

Query: 501 E-VETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPLELAVNDML----- 662
           E ++T+G+  L          G GAV+  +   LL     ++++V ++  V         
Sbjct: 67  EALQTDGIVSL----------GGGAVVTESTRELLADHTVVYLNVSIDEGVRRTSGSNTR 116

Query: 663 --------KSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNV 794
                   + K A   +   +F + ++    R D  + R  V+D+   ++ V
Sbjct: 117 PLLNVADPRGKYAQLFAQRSAFYEEVSNFMVRCDGKEPRRVVTDILSFIEEV 168
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>Q7N7B0:AROL_PHOLL Shikimate kinase 2 - Photorhabdus luminescens subsp. laumondii|
          Length = 174

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 21/111 (18%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           ++IVG     K  + KLLAN + Y ++ ++  ++             +   + + ++E++
Sbjct: 5   LFIVGARGAGKTTVGKLLANELSYTFIDTDHHIQQT-SNMTIADIVNQQGWQQFRQLESQ 63

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELAVNDMLK 665
            L+Q+T + + V+  G G ++++ N   +R +G  I++     +    +++
Sbjct: 64  ALQQVTQI-NRVISTGGGIILSAENRQYMRQNGTVIYLQASASILAERLMQ 113
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>Q8XHE4:SYI_CLOPE Isoleucyl-tRNA synthetase - Clostridium perfringens|
          Length = 1039

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
 Frame = +3

Query: 738  DDLKERYAVSDVTVSLQNVASQLGYSSIDSLSL----EDMVVEIVSRIEKLIQAKAMME 902
            D+L+E   V ++   +QN+  + G+   D ++L     DM+++++ + E +I+ + + E
Sbjct: 953  DELREEGHVREIISKIQNMRKESGFEVADKITLYVAENDMLLDVIKKFEDVIKKETLTE 1011
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>Q5LSY0:AROK_SILPO Shikimate kinase - Silicibacter pomeroyi|
          Length = 195

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + +VG     K  + + LA  +   +L S+  +E           F    E  + + E+ 
Sbjct: 23  VVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEIESA-ANMSIPEIFERDGEAFFRDRESR 81

Query: 516 GLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVNDM--LKSKGAAAI 686
            + +L      VL  G GA +   N  ++  HGVS+W+   L +  N +    ++     
Sbjct: 82  VIARLLEGAPCVLSTGGGAFLAEANRRMISEHGVSVWLKADLTVLWNRVRHKDTRPLLRT 141

Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQL 806
           +DP +  +A+ + R       +   +SD   S++ +  ++
Sbjct: 142 ADPRATLRALYEARVPLYSEADLCVISDGETSIEQMVDRV 181
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>Q5YVL0:SYC2_NOCFA Putative cysteinyl-tRNA synthetase 2 - Nocardia farcinica|
          Length = 412

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
 Frame = +3

Query: 513 EGLKQLTSMGSLVLCCG---DGAVMNSTNLGLLRHGVS---IWIDVPLELAVNDMLKSKG 674
           +G K   S G+LVL      DG    +  LGLL        +W D  LE A+  + + + 
Sbjct: 286 DGEKMSKSRGNLVLVSTLRKDGVDPAAIRLGLLDGHYRQDRMWTDAVLEAALARLARWRS 345

Query: 675 AAAISDPDSFSQAMAKLRQRY-DDLKERYAVSDVTVSLQNVASQLGYSSIDS 827
           A A+S   +    +A+LRQ   DDL    A++ V      V   L Y   DS
Sbjct: 346 ATALSAGPAAHDTIARLRQHLADDLDSPKALAAVD---NWVTEALDYGGSDS 394
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>Q9DBN5:LONP2_MOUSE Peroxisomal Lon protease homolog 2 - Mus musculus (Mouse)|
          Length = 852

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = +3

Query: 711 AMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIEKLIQAK 890
           A+AKLR+  D+L  R A+ D+  S+   +++     +D++SLED     +  + + I+  
Sbjct: 167 AVAKLRRLLDNLP-REALPDILTSIIRTSNKEKLQILDAVSLEDRFKMTIPLLVRQIEGL 225

Query: 891 AMMEAAGKPE 920
            +++   KP+
Sbjct: 226 KLLQKTRKPK 235
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>Q6G1N9:AROK_BARHE Shikimate kinase - Bartonella henselae (Rochalimaea henselae)|
          Length = 210

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 1/150 (0%)
 Frame = +3

Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515
           + ++G     K  I K +A  +   +  S+  +E           F+   E  +  +E  
Sbjct: 27  LVLIGLMGVGKSVIGKRIATMLCLPFYDSDQEIEKA-AQMTITELFKTYGESEFRALEQR 85

Query: 516 GLKQLTSMGSLVLCCGDGAVMNST-NLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAISD 692
            +  L     LVL  G GA +N      + ++G+SIW+ V L+  +  + K      +  
Sbjct: 86  VILNLMKNRPLVLATGGGAYINEDIRKAVHKNGISIWLKVDLDTLMQRVSKRPTRPLLQT 145

Query: 693 PDSFSQAMAKLRQRYDDLKERYAVSDVTVS 782
            +        ++QRY      YA +++T++
Sbjct: 146 ENPKETMQKLMKQRY----PIYAKANLTIN 171
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>Q3MIB4:LONP2_RAT Peroxisomal Lon protease homolog 2 - Rattus norvegicus (Rat)|
          Length = 852

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 19/70 (27%), Positives = 38/70 (54%)
 Frame = +3

Query: 711 AMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIEKLIQAK 890
           A+AKLR+  D L  R A+ D+  S+   +++     +D++SLED     +  + + I+  
Sbjct: 167 AVAKLRRLLDSLP-REALPDILTSIIRTSNKEKLQILDAVSLEDRFKMTIPLLVRQIEGL 225

Query: 891 AMMEAAGKPE 920
            +++   KP+
Sbjct: 226 KLLQKTRKPK 235
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>P21249:ANT1_ONCVO Major antigen - Onchocerca volvulus|
          Length = 2022

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
 Frame = +3

Query: 654  DMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERY-----AVSDVTVSLQNVASQLGYSS 818
            D LK K   +I +   +S A+ KLR  YD L+  Y        ++T ++Q++ S+L  S 
Sbjct: 1156 DRLKQKLQRSIENAKKYSDALDKLRPEYDRLQNLYREKIKQAENLTQAVQDLESRLNQSR 1215

Query: 819  IDSLSLEDMVV-------EIVSRIEKL 878
             +     D ++        + S +EKL
Sbjct: 1216 RELRDATDKLIASEGDRNALRSEVEKL 1242
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>Q6A085:ZN629_MOUSE Zinc finger protein 629 - Mus musculus (Mouse)|
          Length = 867

 Score = 32.3 bits (72), Expect = 4.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -2

Query: 840 PPGSKSRCC--CSLAEKPHSVVKQ*HQKLHSAPSDHHNADGALPLPEKRNQGLK*LPPPC 667
           PPG+K   C  C        +  Q HQ++H   + + NADG +  P  + Q L+    P 
Sbjct: 562 PPGAKPHKCLVCGKGFNDEGIFMQ-HQRIHIGENPYKNADGLITHPAPKPQQLRPSRLPF 620

Query: 666 SSTCH 652
               H
Sbjct: 621 GGNSH 625
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>P19769:INSK_ECOLI Putative transposase insK for insertion sequence element IS150 -|
           Escherichia coli
          Length = 283

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 681 AISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSL 830
           A+S PD ++    ++ + Y + + RY    VT+SL     Q+ + ++  L
Sbjct: 33  ALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRL 82
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>Q2RMW1:AROK_RHORT Shikimate kinase - Rhodospirillum rubrum (strain ATCC 11170 / NCIB|
           8255)
          Length = 188

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 471 FRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLR-HGVSIWIDVPLELA 647
           F    E  +  +E   + +L +  + VL  G GA M      L+R HG+S+W+   L+L 
Sbjct: 59  FATYGESEFRALERRVMARLLAGRTCVLATGGGAFMAEDTRALIRLHGLSLWLRADLDLL 118

Query: 648 V 650
           V
Sbjct: 119 V 119
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>Q69ZM6:STK36_MOUSE Serine/threonine-protein kinase 36 - Mus musculus (Mouse)|
          Length = 1268

 Score = 31.6 bits (70), Expect = 7.2
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 998  CIWNVAKILKSSDRT*FL--GPQSVLESFRLPSSFHHCLCLDQLLNPTHN 855
            CI  V   L +S++   L  G Q +  S   P+S  HC  L QLL PTH+
Sbjct: 1218 CIHQVLVSLGASEKLALLSLGNQLLPNSSNRPASVRHCRKLIQLLRPTHS 1267
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>P63603:AROL_SALTY Shikimate kinase 2 - Salmonella typhimurium|
          Length = 181

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +3

Query: 333 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 512
           P+Y+VG     K  I   LA +  +R+  ++  L+  +  + ++A   E +  G      
Sbjct: 4   PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 653
               +  S  S V+  G G ++   N   + R GV I++  P+   VN
Sbjct: 62  TAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVN 109
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>P63604:AROL_SALTI Shikimate kinase 2 - Salmonella typhi|
          Length = 181

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +3

Query: 333 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 512
           P+Y+VG     K  I   LA +  +R+  ++  L+  +  + ++A   E +  G      
Sbjct: 4   PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 653
               +  S  S V+  G G ++   N   + R GV I++  P+   VN
Sbjct: 62  TAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVN 109
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>Q5PFV5:AROL_SALPA Shikimate kinase 2 - Salmonella paratyphi-a|
          Length = 181

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +3

Query: 333 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 512
           P+Y+VG     K  I   LA +  +R+  ++  L+  +  + ++A   E +  G      
Sbjct: 4   PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 653
               +  S  S V+  G G ++   N   + R GV I++  P+   VN
Sbjct: 62  TAALEAVSAPSTVVATGGGIILTEYNRRYMHRVGVVIYLCAPVSTLVN 109
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>Q57SH6:AROL_SALCH Shikimate kinase 2 - Salmonella choleraesuis|
          Length = 181

 Score = 31.2 bits (69), Expect = 9.5
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
 Frame = +3

Query: 333 PIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVET 512
           P+Y+VG     K  I   LA +  +R+  ++  L+  +  + ++A   E +  G      
Sbjct: 4   PLYLVGPRGCGKTTIGMALAQATGFRFADTDRWLQSHV--QMSVADIVEKEGWGGFRARE 61

Query: 513 EGLKQLTSMGSLVLCCGDGAVMNSTNLGLL-RHGVSIWIDVPLELAVN 653
               +  S  S V+  G G ++   N   + R GV I++  P+   VN
Sbjct: 62  TAALEAVSAPSTVVATGGGIILTDYNRRYMHRVGVVIYLCAPVSTLVN 109


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 161,622,523
Number of extensions: 3165502
Number of successful extensions: 9301
Number of sequences better than 10.0: 69
Number of HSP's gapped: 9289
Number of HSP's successfully gapped: 69
Length of query: 419
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 303
Effective length of database: 68,868,219
Effective search space: 20867070357
Effective search space used: 20867070357
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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