ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf114d13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064812:Os01g0102600 | 363 | e-100 | 2 | AK062086:Os01g0102600 | 109 | 4e-24 | 3 | AK109730:Os06g0225800 | 101 | 1e-21 | 4 | AK067948:Os04g0640600 | 55 | 1e-07 | 5 | Os09g0250200:Os09g0250200 | 34 | 0.25 | 6 | AK111680:Os02g0153200 | 33 | 0.43 | 7 | Os09g0518600:Os09g0518600 | 32 | 0.95 | 8 | AK100237:Os10g0577700 | 30 | 2.8 | 9 | AK061718:Os10g0577700 | 30 | 2.8 | 10 | AK108178:Os02g0679700 | 30 | 4.7 | 11 | AK065357:Os03g0268100 | 30 | 4.7 | 12 | AK063542:Os06g0710800 | 29 | 6.2 | 13 | AK108433:Os11g0449800 | 29 | 8.0 | 14 | AK107801:Os01g0136600 | 29 | 8.0 |
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>AK064812:Os01g0102600 | Length = 269 Score = 363 bits (931), Expect = e-100 Identities = 184/215 (85%), Positives = 203/215 (94%) Frame = +3 Query: 273 NPSVALLRKTAEAVGDFRKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGG 452 NPSV LLRKTAEAVGDFRKTPIYIVGTDC AKRNIAKLLANSIIYRYLCSE+LLEDVLGG Sbjct: 57 NPSVELLRKTAEAVGDFRKTPIYIVGTDCTAKRNIAKLLANSIIYRYLCSEELLEDVLGG 116 Query: 453 KDALAAFRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDV 632 KDAL AFRESD GYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWID+ Sbjct: 117 KDALNAFRESDLNGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDI 176 Query: 633 PLELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGY 812 PLEL VNDMLK++ A SDPDSFS+AM+++RQR+D+LKERY VSD+TVS+QNVASQLGY Sbjct: 177 PLELVVNDMLKTQ---ATSDPDSFSEAMSRVRQRHDELKERYGVSDITVSVQNVASQLGY 233 Query: 813 SSIDSLSLEDMVVEIVSRIEKLIQAKAMMEAAGKP 917 SSIDS++LEDMV+EIV +IE+LI+AK+MMEAAGKP Sbjct: 234 SSIDSVTLEDMVLEIVRQIERLIRAKSMMEAAGKP 268
>AK062086:Os01g0102600 | Length = 70 Score = 109 bits (273), Expect = 4e-24 Identities = 53/69 (76%), Positives = 67/69 (97%) Frame = +3 Query: 711 AMAKLRQRYDDLKERYAVSDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIEKLIQAK 890 AM+++RQR+D+LKERY VSD+TVS+QNVASQLGYSSIDS++LEDMV+EIV +IE+LI+AK Sbjct: 1 AMSRVRQRHDELKERYGVSDITVSVQNVASQLGYSSIDSVTLEDMVLEIVRQIERLIRAK 60 Query: 891 AMMEAAGKP 917 +MMEAAGKP Sbjct: 61 SMMEAAGKP 69
>AK109730:Os06g0225800 | Length = 264 Score = 101 bits (251), Expect = 1e-21 Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 5/206 (2%) Frame = +3 Query: 279 SVALLRKTAEAVGDFRKTPIYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKD 458 ++ L RK+ E + IY+VG + K +AK+LA + Y + S+ L+E +G Sbjct: 35 ALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPS 94 Query: 459 ALAAFRESDEKGYLEVETEGLKQLTSMGSLVLCCGDGAVMNSTNLGLLRHGVSIWIDVPL 638 F+E E + + E+ L+ L+SM LV+ G GAV+ N ++ G+S+W+DVPL Sbjct: 95 VAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDVPL 154 Query: 639 ELAVNDMLKSKGAAA---ISDP--DSFSQAMAKLRQRYDDLKERYAVSDVTVSLQNVASQ 803 + A+ + G A+ + P D ++ A +KL + + YA +D VSL+ +A++ Sbjct: 155 D-ALARRIAQVGTASRPLLDQPSSDPYTAAFSKLSMLAEQRGDAYANADARVSLEEIAAK 213 Query: 804 LGYSSIDSLSLEDMVVEIVSRIEKLI 881 G+ + L+ D+ +E + +IE + Sbjct: 214 QGHDDVSKLTPTDIAIEALLKIENFV 239
>AK067948:Os04g0640600 | Length = 125 Score = 54.7 bits (130), Expect = 1e-07 Identities = 30/105 (28%), Positives = 62/105 (59%), Gaps = 5/105 (4%) Frame = +3 Query: 600 LRHGVSIWIDVPLELAVNDMLKSKGAAAI-----SDPDSFSQAMAKLRQRYDDLKERYAV 764 ++ G +IW+DVPL+ A+ + + G A+ D +++A AKL ++ + YA Sbjct: 20 MKKGSTIWLDVPLD-ALARRIAAVGTASRPLLHQESGDPYAKAYAKLTALFEQRMDSYAN 78 Query: 765 SDVTVSLQNVASQLGYSSIDSLSLEDMVVEIVSRIEKLIQAKAMM 899 +D VSL+++A + G+S++ +L+ + +E + ++E + KAM+ Sbjct: 79 ADARVSLEHIAVKQGHSNVTTLTPSAIAIEALLKMESFLTEKAMI 123
>Os09g0250200:Os09g0250200 | Length = 270 Score = 33.9 bits (76), Expect = 0.25 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Frame = +2 Query: 506 RDRGAEAAHVHGQPGALLRRWRRHELHQPGAA--------EAWSLHLDRRP 634 R RG E +P A RRWRR E + GAA W++ +DR P Sbjct: 117 RGRGRERGGGESRPAAAPRRWRRGEERRGGAAAQGAWSDGREWTVEMDRDP 167
>AK111680:Os02g0153200 | Length = 1050 Score = 33.1 bits (74), Expect = 0.43 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Frame = -1 Query: 1189 CSSSSFLLTGKNNL-------LINVRPLSHVHFTTGRMNNLQRGVLCYYNVV 1055 CS +FL TG+NNL L N+ L H+ F ++ G++ N+V Sbjct: 231 CSKLTFLSTGRNNLSGTLPYELFNITSLKHLSFPNNQLEGSIEGIMKLINLV 282
>Os09g0518600:Os09g0518600 | Length = 325 Score = 32.0 bits (71), Expect = 0.95 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = -1 Query: 679 AAPLLFNMSFTANSSGTSIQMETPCLSSPRLVEFMTAPSP-QQSTRLPMDVSCFSPSVS- 506 A PL ++ ANSS Q E P L + F P P STR S S S + Sbjct: 81 ATPLFPSLEMEANSSQMVFQRELPILQPVKTSRFSIKPEPTSTSTRTESPTSSSSKSATP 140 Query: 505 TSR*PFSSDSRN 470 T+R SS +N Sbjct: 141 TARSSSSSSKKN 152
>AK100237:Os10g0577700 | Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 3/153 (1%) Frame = +3 Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515 ++IVG + +AK +A I Y +C+ +LLE K E E Sbjct: 178 VHIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESAT-EKSIDKWLASEGVDSVAEAECV 236 Query: 516 GLKQLTS-MGSLVLCCG--DGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAI 686 L+ L+S + ++V G GA L G ++W+ ++ Sbjct: 237 VLESLSSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWL------------------SV 278 Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSL 785 SD + A + R+ YA +DV V L Sbjct: 279 SDASDEASAKEEARRSVSSGNVAYAKADVVVKL 311
>AK061718:Os10g0577700 | Length = 375 Score = 30.4 bits (67), Expect = 2.8 Identities = 35/153 (22%), Positives = 57/153 (37%), Gaps = 3/153 (1%) Frame = +3 Query: 336 IYIVGTDCNAKRNIAKLLANSIIYRYLCSEDLLEDVLGGKDALAAFRESDEKGYLEVETE 515 ++IVG + +AK +A I Y +C+ +LLE K E E Sbjct: 178 VHIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESAT-EKSIDKWLASEGVDSVAEAECV 236 Query: 516 GLKQLTS-MGSLVLCCG--DGAVMNSTNLGLLRHGVSIWIDVPLELAVNDMLKSKGAAAI 686 L+ L+S + ++V G GA L G ++W+ ++ Sbjct: 237 VLESLSSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWL------------------SV 278 Query: 687 SDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSL 785 SD + A + R+ YA +DV V L Sbjct: 279 SDASDEASAKEEARRSVSSGNVAYAKADVVVKL 311
>AK108178:Os02g0679700 | Length = 281 Score = 29.6 bits (65), Expect = 4.7 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = +3 Query: 195 GNNLLLDSNGLCRHGXXXXXXXXXXXNPSVALLRKTAEAVGDFRKTPIYIV 347 GN D G CR G + SVA+++++ + +GDFR++ + ++ Sbjct: 143 GNGDATDKPGDCRDGGGGGDGVGVALDGSVAVVKQSDDPLGDFRQSMLQMI 193
>AK065357:Os03g0268100 | Length = 445 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/51 (29%), Positives = 30/51 (58%) Frame = +3 Query: 636 LELAVNDMLKSKGAAAISDPDSFSQAMAKLRQRYDDLKERYAVSDVTVSLQ 788 L+ AVND+ K AAA++ D+ +Q + ++ + +E+Y + + SL+ Sbjct: 100 LKKAVNDISLEKDAAAVAKEDALAQLRSMKKRLKEAEEEQYRAEEDSASLR 150
>AK063542:Os06g0710800 | Length = 160 Score = 29.3 bits (64), Expect = 6.2 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = +2 Query: 266 GAQPLRRPAQEDRGGRRRFQEDAHLH 343 GA P RRP G RRR E AH+H Sbjct: 106 GAPPPRRPPPPPDGRRRRRAEPAHVH 131
>AK108433:Os11g0449800 | Length = 153 Score = 28.9 bits (63), Expect = 8.0 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Frame = -2 Query: 843 CPPGSKSRCCC----SLAEKPHSVVKQ*HQKLHSAPSDHHNADGALP-LPEKRNQGLK*L 679 C G ++RC S E S+ K Q H + +G L +R +G Sbjct: 5 CAGGIQARCLARGATSAGEDEGSLGKTRVQSTHERATTMEGCEGTQGRLRPRRRRG---- 60 Query: 678 PPPCSSTCHSRLIQAG---RRSRWRLHASAAP 592 S RL+Q G RR RW+LHA+ P Sbjct: 61 ----SGAGGCRLLQMGGRPRRHRWKLHAAPPP 88
>AK107801:Os01g0136600 | Length = 176 Score = 28.9 bits (63), Expect = 8.0 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = -2 Query: 810 SLAEKPHSVVKQ*---HQKLHSAPSDHHNADGALPLPEKRNQGLK*LPPPCS--STCHSR 646 S E PH + H+ P+DHH LPLP + Q +PPP S ++ R Sbjct: 94 STQEPPHKQISTRPPPHRAGAPPPADHHTCCIELPLPWELAQTSS-VPPPASLLASFGRR 152 Query: 645 LIQAGRRSRWRLHASAAPG 589 + SRWR + G Sbjct: 153 RTRNWTASRWRSELPSLTG 171 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,960,868 Number of extensions: 564108 Number of successful extensions: 1813 Number of sequences better than 10.0: 14 Number of HSP's gapped: 1809 Number of HSP's successfully gapped: 14 Length of query: 419 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 316 Effective length of database: 11,275,632 Effective search space: 3563099712 Effective search space used: 3563099712 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
