ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf111b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120800:Os02g0797200 109 9e-25
2D29725:Os02g0796900 107 4e-24
3AK062846: 95 2e-20

>AK120800:Os02g0797200 |
          Length = 51
 Score =  109 bits (272), Expect = 9e-25
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = +3

Query: 72  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 224
           MPSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51



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>D29725:Os02g0796900 |
          Length = 50

 Score =  107 bits (267), Expect = 4e-24
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = +3

Query: 75  PSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 224
           PSHKTFRIK+KLAKK RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1   PSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 50



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>AK062846: |
          Length = 51

 Score = 95.1 bits (235), Expect = 2e-20
 Identities = 42/50 (84%), Positives = 46/50 (92%)
 Frame = +3

Query: 72  MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 221
           MPS KTFRIKQKL+KK +QNRPIP WIRM+TDNTI+YN KRRHWRRTKLG
Sbjct: 1   MPSQKTFRIKQKLSKKLKQNRPIPQWIRMKTDNTIKYNMKRRHWRRTKLG 50


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 11,286,150
Number of extensions: 248102
Number of successful extensions: 754
Number of sequences better than 10.0: 3
Number of HSP's gapped: 754
Number of HSP's successfully gapped: 3
Length of query: 154
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 62
Effective length of database: 11,716,083
Effective search space: 726397146
Effective search space used: 726397146
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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