>LOC_Os06g03660:12006.t00258:unspliced-genomic peroxisomal membrane protein PEX11-1, putative, expressed|
Length = 3877
Score = 135 bits (289), Expect(7) = e-115
Identities = 55/66 (83%), Positives = 62/66 (93%)
Frame = +3 / +3
Query: 114 YKMASLDTVRGDLGLVVLYLSKAEARDKICRAIQYGSKFLSNGQPGPAQNVDKSTSLARK 293
Y M+SL++ R DL L++LYL+KAEARDKICRAIQYGSKF+SNGQPGPAQNVDKSTSLARK
Sbjct: 2040 YSMSSLESARADLALLILYLNKAEARDKICRAIQYGSKFVSNGQPGPAQNVDKSTSLARK 2219
Query: 294 VFRLFK 311
VFRLFK
Sbjct: 2220 VFRLFK 2237
Score = 124 bits (266), Expect(7) = e-115
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +3 / +2
Query: 612 YKNEQYRMKLKKSNERLLALIKSSLDIVVAVGLLQLAPKKVTPRVTGAFGFASSLIACYQ 791
++NEQY+MKL+K NER LALIKSSLDIVVA+GLLQLAPKKVTPRVTGAFGFASSLIACYQ
Sbjct: 3026 WQNEQYQMKLQKCNERRLALIKSSLDIVVAIGLLQLAPKKVTPRVTGAFGFASSLIACYQ 3205
Query: 792 L 794
+
Sbjct: 3206 V 3208
Score = 63.8 bits (133), Expect(7) = e-115
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +3 / +3
Query: 459 KNKERAEFLGRIAFYCFLGSNTCTTIIEL 545
+NKERAEFL +IAFYCFLGSNTCT+IIE+
Sbjct: 2694 QNKERAEFLSKIAFYCFLGSNTCTSIIEV 2780
Score = 60.6 bits (126), Expect(7) = e-115
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = +3 / +2
Query: 384 KSKNAMLSTFLFLDQIVWAGRTGVYK 461
+SKNA+LSTFLFLDQIVWAGRTG+YK
Sbjct: 2501 QSKNALLSTFLFLDQIVWAGRTGIYK 2578
Score = 59.7 bits (124), Expect(7) = e-115
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3 / +1
Query: 303 LFKFVNDLQALISPPAKGTPLPLILLGK 386
+ +FVNDL ALISPPAKGTPLPLILLGK
Sbjct: 2323 ILQFVNDLHALISPPAKGTPLPLILLGK 2406
Score = 53.3 bits (110), Expect(7) = e-115
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 543 LAELQRLSKSMKKLEKDLKHQELYKNEQY 629
+AELQRLSKSMKKLEK+LKHQEL K Y
Sbjct: 2869 VAELQRLSKSMKKLEKELKHQELLKVPSY 2955
Score = 31.3 bits (62), Expect(7) = e-115
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 790 SCFQPQPNPSDLP 828
SC QPQPNPSD P
Sbjct: 3306 SCSQPQPNPSDPP 3344
Score = 105 bits (224), Expect(6) = 1e-80
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = -1 / -2
Query: 820 HLDLAGAGSNW*QAMSELANPNAPVTRGVTFFGASCRSPTATTMSRLDLMRASSLSLDFF 641
H+ + + *QAMSELANPNAPVTRGVTF GAS SP ATTMSRLDLMRA LSL F
Sbjct: 3234 HMTICES*GT**QAMSELANPNAPVTRGVTFLGAS*SSPIATTMSRLDLMRARRLSLHFC 3055
Query: 640 SFIRYCSF 617
SFI YCSF
Sbjct: 3054 SFIWYCSF 3031
Score = 90.9 bits (192), Expect(6) = 1e-80
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -1 / -1
Query: 310 LNSRKTFRAKLVDLSTFCAGPGCPLLRNLDPYCXXXXXXXXXXXXLRYRTTSPRSPLTVS 131
L SRKT RA+LVDLSTFCAGPGCPLL N +PYC RY+ + RS L +S
Sbjct: 2236 LKSRKTLRARLVDLSTFCAGPGCPLLTNFEPYCIALQILSLASALFRYKISRARSALALS 2057
Query: 130 SEAILY 113
SE ILY
Sbjct: 2056 SELILY 2039
Score = 55.1 bits (114), Expect(6) = 1e-80
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = -1 / -2
Query: 460 LYTPVLPAQTIWSRKRKVDSIAFFD 386
LY PVLPA TIWSRKRKVDS AFFD
Sbjct: 2577 LYIPVLPAHTIWSRKRKVDSSAFFD 2503
Score = 52.8 bits (109), Expect(6) = 1e-80
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = -1 / -3
Query: 385 FPSKINGSGVPLAGGLIRAWRSLTN 311
FPSKI GSGVPLAGGLI+A RSLTN
Sbjct: 2405 FPSKIRGSGVPLAGGLIKACRSLTN 2331
Score = 48.3 bits (99), Expect(6) = 1e-80
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -1
Query: 550 SANSMMVVQVLDPRKQ*NAILPRNSARSLF 461
S S+++V VL+PRKQ*NAIL RNSARSLF
Sbjct: 2785 SHTSIILVHVLEPRKQ*NAILLRNSARSLF 2696
Score = 41.8 bits (85), Expect(6) = 1e-80
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -1 / -3
Query: 610 SS*CLRSFSNFFIDLDSR*SSA 545
SS CL SFS+FFIDLDSR*SSA
Sbjct: 2936 SSWCLSSFSSFFIDLDSR*SSA 2871
Score = 80.8 bits (170), Expect(7) = 2e-59
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2 / +1
Query: 617 ERAVSDEAEEVQREAARPHQIKP*HSRRGGAPATGSEKGDSSCHGGIWVC*LAHRLL 787
ERA+ DE EVQREA+R HQI+P HS A +TGS++ DS+C G+W+C*L H LL
Sbjct: 3031 ERAIPDETAEVQREASRSHQIEPRHSCCYRAASTGSQESDSACDRGVWIC*LTHCLL 3201
Score = 76.7 bits (161), Expect(7) = 2e-59
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = +1 / +1
Query: 127 HWTPSEEILGWLFCT*ARLRQEIRSVELYNMDPSS*ATDNQDLHRMSTNQPV*PGKFSDC 306
HW E+IL LF T* RL+QEIRSVELYNM + * DNQ LHRM T++ V* KFSD
Sbjct: 2053 HWRVQEQILLCLFYT*TRLKQEIRSVELYNMARNL*VMDNQGLHRMLTSRLV*LVKFSDF 2232
Query: 307 L 309
L
Sbjct: 2233 L 2235
Score = 52.4 bits (108), Expect(7) = 2e-59
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2 / +1
Query: 386 VEECDAVNFPLSGPNRLGWENRSIQ 460
VEEC A+NFPLSGPN +GW++R+IQ
Sbjct: 2503 VEECTAINFPLSGPNCMGWKDRNIQ 2577
Score = 39.6 bits (80), Expect(7) = 2e-59
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 311 VC**SPSSD*PPCQRNSTSVDLTWE 385
VC**S D* CQRNST+ DLTW+
Sbjct: 2331 VC**SACFD*SSCQRNSTTPDLTWK 2405
Score = 36.3 bits (73), Expect(7) = 2e-59
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 545 SRASAAIQIDEEVREGPQASRAVQERAVSDEA 640
SRASAAIQ+DEE REG AV+ + D +
Sbjct: 2871 SRASAAIQVDEETREGA*TPGAVKGTVLYDHS 2966
Score = 27.6 bits (54), Expect(7) = 2e-59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +2
Query: 789 QLLPAPAKSK*S 824
QLLPAPAKSK*S
Sbjct: 3305 QLLPAPAKSK*S 3340
Score = 26.3 bits (51), Expect(7) = 2e-59
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 460 RTRSVQSSLAG*HFIAFSDLIPVL 531
RTRS Q+S A *HFIA L VL
Sbjct: 2695 RTRSEQNSSAR*HFIASWVLTHVL 2766
Score = 83.5 bits (176), Expect(7) = 5e-52
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = -3 / -3
Query: 311 LKQSENFPG*TG*FVDILCRSWLSVAQELGSILYSSTDLISCLSLA*VQNNQPKISSDGV 132
LK+SENF *T V+ILCR WLS+ + +ILYSSTDLISC SL *V N Q KI S +
Sbjct: 2237 LKKSENFTS*TSRLVNILCRPWLSITHKFRAILYSSTDLISCFSLV*V*NKQSKICSCTL 2058
Query: 131 Q*GHFV 114
Q* H V
Sbjct: 2057 Q*THTV 2040
Score = 54.7 bits (113), Expect(7) = 5e-52
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = -3 / -1
Query: 797 KQLVTGDERASKPKCPRDTRSHLFRSQLQEPHRDDYVKA*FDEGEQP 657
+ L+ +E ASK K P TRSH SQL++P+ ++YV+A FDE E P
Sbjct: 3211 RYLIASNE*ASKSKRPCHTRSHFLGSQLKQPYSNNYVEARFDESETP 3071
Score = 45.1 bits (92), Expect(7) = 5e-52
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 386 LPK*DQRKWSSFGRGANQSLEIINKLKQS 300
L K*DQ WSSFGR NQS++IINKL+ +
Sbjct: 2406 LSK*DQG*WSSFGRRTNQSMQIINKLQNN 2320
Score = 43.7 bits (89), Expect(7) = 5e-52
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 459 CILLFSQPKRFGPERGKLTASHSST 385
CI L QP +FGPERGKL A HSST
Sbjct: 2576 CIFLSFQPIQFGPERGKLIAVHSST 2502
Score = 39.6 bits (80), Expect(7) = 5e-52
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 530 STGIRSEKAIKCYPAKELCTLLVL 459
ST +R+++AIKCY A+E C+LLVL
Sbjct: 2765 STCVRTQEAIKCYLAEEFCSLLVL 2694
Score = 34.1 bits (68), Expect(7) = 5e-52
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 827 GRSLGFGWGWKQL 789
G SLGFGWGW+QL
Sbjct: 3343 GGSLGFGWGWEQL 3305
Score = 34.1 bits (68), Expect(7) = 5e-52
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 597 *GPSLTSSSIWIAAEARL 544
* PSL SSS WIAAEARL
Sbjct: 2923 *APSLVSSSTWIAAEARL 2870
Score = 78.5 bits (165), Expect(4) = 3e-30
Identities = 38/65 (58%), Positives = 43/65 (66%)
Frame = -2 / -2
Query: 303 VGKLSGLNWLICRHSVQVLVVRCSGTWIHIV*LYRSYLLPQPCLGTEQPAQDLL*RCPVR 124
VGKL L+ C+HSVQ LVV S HIV*LYRSYLL QPCLG + QDLL PV
Sbjct: 2229 VGKLYELD*STCQHSVQALVVHYSQISSHIV*LYRSYLLLQPCLGIK*AEQDLLLHSPVN 2050
Query: 123 PFCIS 109
+CI+
Sbjct: 2049 SYCIA 2035
Score = 39.1 bits (79), Expect(4) = 3e-30
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -3 / -1
Query: 461 LVYSCSPSPNDLVQKEES*QHRILRL 384
LVYSC SP +LVQKEES* ILRL
Sbjct: 2578 LVYSCPSSPYNLVQKEES**QCILRL 2501
Score = 36.8 bits (74), Expect(4) = 3e-30
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 381 QVRSTEVEFLWQGG*SELGDH*QT 310
QVRS VEFLWQ *S+ DH*QT
Sbjct: 2401 QVRSGVVEFLWQED*SKHADH*QT 2330
Score = 33.6 bits (67), Expect(4) = 3e-30
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -2
Query: 546 LTR*W*YRY*IRESNKMLSCQGTLHAPCS 460
+ +*+*Y * SNKMLSC G L APCS
Sbjct: 2781 IPQ*Y*YMC*NPGSNKMLSC*GILLAPCS 2695
Score = 51.0 bits (105), Expect(5) = 6e-24
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1 / +3
Query: 385 SRRMRCCQLSSFWTKSFGLGEQEYTRTRSVQSSL 486
SRRM C QLSSFWTK +GL QEYTR + +SL
Sbjct: 2502 SRRMHCYQLSSFWTKLYGLEGQEYTRFDFLFTSL 2603
Score = 50.6 bits (104), Expect(5) = 6e-24
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2 / +2
Query: 113 IQNGLTGHRQRRSWAGCSVPKQG*GKR*DL*SYTIWIQV 229
IQ TG + RS + +PKQG* KR*DL*SYTIW+++
Sbjct: 2039 IQYEFTGECKSRSCSAYFIPKQG*SKR*DL*SYTIWLEI 2155
Score = 37.3 bits (75), Expect(5) = 6e-24
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 310 SLLMISKL*LAPLPKELHFR*SYL 381
SLLMI L*L LPKELH+ *SYL
Sbjct: 2330 SLLMICML*LVLLPKELHYP*SYL 2401
Score = 36.8 bits (74), Expect(5) = 6e-24
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +1 / +3
Query: 658 GCSPSSNQALT*SSRWGSCNWLRKR*LLVSRGHLGLLARS 777
G S SSN+A T* G NWL ++*L V +G L LLA S
Sbjct: 3072 GVSLSSNRAST*LLL*GCFNWLPRK*LRV*QGRLDLLAHS 3191
Score = 23.5 bits (45), Expect(5) = 6e-24
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 791 VASSPSQIQVICL 829
VA SPSQIQVI L
Sbjct: 3307 VAPSPSQIQVIHL 3345
>LOC_Os03g02590:12003.t00149:unspliced-genomic peroxisomal membrane protein PEX11-1, putative, expressed|
Length = 2214
Score = 131 bits (280), Expect(6) = 1e-84
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +3 / +2
Query: 117 KMASLDTVRGDLGLVVLYLSKAEARDKICRAIQYGSKFLSNGQPGPAQNVDKSTSLARKV 296
KM++LD R +LGLVVLYL+KAEARDKICRAIQYGSKF+SNGQPG AQ+VD+ST+LARKV
Sbjct: 509 KMSTLDATRAELGLVVLYLNKAEARDKICRAIQYGSKFISNGQPGTAQDVDRSTTLARKV 688
Query: 297 FRLFKFVND 323
FRL K ND
Sbjct: 689 FRLLKVTND 715
Score = 111 bits (236), Expect(6) = 1e-84
Identities = 42/59 (71%), Positives = 57/59 (96%)
Frame = +3 / +2
Query: 618 NEQYRMKLKKSNERLLALIKSSLDIVVAVGLLQLAPKKVTPRVTGAFGFASSLIACYQL 794
N+QY+ K+K+S+ERLLAL+K+++D+VVAVGLLQL+PKK+TPRVTGAFGF +SLI+CYQ+
Sbjct: 1556 NDQYKSKMKQSDERLLALVKAAMDVVVAVGLLQLSPKKITPRVTGAFGFVTSLISCYQV 1732
Score = 56.5 bits (117), Expect(6) = 1e-84
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3 / +3
Query: 384 KSKNAMLSTFLFLDQIVWAGRTGVYK 461
+SKNA+LSTFLFLDQ VW GRTG+YK
Sbjct: 984 QSKNALLSTFLFLDQFVWLGRTGIYK 1061
Score = 50.6 bits (104), Expect(6) = 1e-84
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +3 / +2
Query: 309 KFVNDLQALISPPAKGTPLPLILLGK 386
++VNDL LISPPAKGTPL L+LLGK
Sbjct: 821 QWVNDLHGLISPPAKGTPLTLVLLGK 898
Score = 37.3 bits (75), Expect(6) = 1e-84
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3 / +3
Query: 531 TIIELAELQRLSKSMKKLEKDLKHQELYK 617
TI +L EL+RLSKSM+KL ++L+ + Y+
Sbjct: 1353 TIWQLGELKRLSKSMRKLARELRDTDKYE 1439
Score = 36.3 bits (73), Expect(6) = 1e-84
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3 / +2
Query: 462 NKERAEFLGRIAFYCFLGSNTCTTIIELAELQ 557
NKER + + RI+ YC++ S+ C ++E+ LQ
Sbjct: 1196 NKERTDRIVRISLYCWMASSVCAGLVEV*ILQ 1291
Score = 72.1 bits (151), Expect(5) = 1e-38
Identities = 33/68 (48%), Positives = 38/68 (55%)
Frame = -1 / -1
Query: 322 SLTNLNSRKTFRAKLVDLSTFCAGPGCPLLRNLDPYCXXXXXXXXXXXXLRYRTTSPRSP 143
SL L SRKT RA++VDLST CA PGCPLL N +PY +YRTT P S
Sbjct: 714 SLVTLRSRKTLRARVVDLSTSCAVPGCPLLINFEPYWIALHILSLASALFKYRTTRPSSA 535
Query: 142 LTVSSEAI 119
S+ I
Sbjct: 534 RVASNVLI 511
Score = 68.4 bits (143), Expect(5) = 1e-38
Identities = 34/57 (59%), Positives = 36/57 (63%)
Frame = -1 / -1
Query: 787 *QAMSELANPNAPVTRGVTFFGASCRSPTATTMSRLDLMRASSLSLDFFSFIRYCSF 617
*Q MSE+ NPNAPVT GV F G S RSPTATT S ASS S D F + Y SF
Sbjct: 1725 *QEMSEVTNPNAPVTLGVIFLGDS*RSPTATTTSMAAFTSASSRSSDCFILLLYWSF 1555
Score = 41.4 bits (84), Expect(5) = 1e-38
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -1 / -1
Query: 385 FPSKINGSGVPLAGGLIRAWRSLTN 311
FPSK + GVPLAGGLIR RSLT+
Sbjct: 897 FPSKTSVRGVPLAGGLIRPCRSLTH 823
Score = 40.9 bits (83), Expect(5) = 1e-38
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 460 LYTPVLPAQTIWSRKRKVDSIAFFD 386
LY PVLP T WSR +KV+S AF D
Sbjct: 1060 LYIPVLPNHTNWSRNKKVESSAFLD 986
Score = 24.0 bits (46), Expect(5) = 1e-38
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / -3
Query: 518 RSEKAIKCYPAKELCTLLVL 459
R A++ YP +C LLVL
Sbjct: 1252 RGHPAVEGYPYNPVCALLVL 1193
Score = 47.3 bits (97), Expect(2) = 3e-07
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = -3 / -3
Query: 323 IINKLKQSENFPG*TG*FVDILCRSWLSVAQELGSILYSSTDLISCLSLA*VQNNQPKIS 144
I++ L++ ENF G VDILCR+ L V +L ++L L+ L VQNN+ ++
Sbjct: 715 IVSDLEKPENFASKGGGPVDILCRARLPVTDKLRAVLDRPAYLVPGLGFVQVQNNKAELC 536
Query: 143 SDGV 132
S G+
Sbjct: 535 SRGI 524
Score = 32.2 bits (64), Expect(2) = 3e-07
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 461 LVYSCSPSPNDLVQKEES*QHRILRL 384
LVY CS P LVQ++ES + RI L
Sbjct: 1061 LVYPCSSQPYKLVQEQESREQRIFGL 984
Score = 36.3 bits (73), Expect(2) = 3e-04
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +1 / +1
Query: 376 YLGSRRMRCCQLSSFWTKSFGLGEQEYTR 462
Y S +MRC +LS WT +G EQ YTR
Sbjct: 976 YNCSPKMRCSRLSCSWTNLYGWEEQGYTR 1062
Score = 33.1 bits (66), Expect(2) = 3e-04
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +1 / +3
Query: 136 PSEEILGWLFCT*ARLRQEIRSVELYNMDPSS*ATDNQDLHRMSTNQPV*PGKFS 300
P E+ LFCT* + R R N S T + HRMST P KFS
Sbjct: 528 PREQSSALLFCT*TKPRPGTRYAGRSNTARSLSVTGSLARHRMSTGPPPLLAKFS 692
>LOC_Os01g38600:12001.t03396:unspliced-genomic hypothetical protein|
Length = 617
Score = 32.2 bits (64), Expect = 7.6
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 909 SVSATTRGVTPTTVLPIDALAVWP 838
S SATT +TPTT LP+ A A++P
Sbjct: 371 SFSATTSTLTPTTSLPLAAPALFP 300
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 510,352,199
Number of extensions: 8368430
Number of successful extensions: 34959
Number of sequences better than 10.0: 28
Length of query: 412
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 362
Effective length of database: 52,799,986
Effective search space: 19113594932
Effective search space used: 19113594932
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)