ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf172a22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK119785:Os01g0367100 471 e-133
2AK101542:Os01g0367100 471 e-133
3AK101540:Os01g0367100 471 e-133
4AK068655:Os01g0367100 471 e-133
5AK072605:Os01g0367400 290 1e-78
6AK105060:Os01g0367100 233 2e-61
7AK063804:Os01g0367400 229 4e-60
8Os11g0644100:Os11g0644100 32 0.90
9AK109046: 30 2.6
10AK120997:Os06g0652400 30 4.5
11AK103529:Os06g0652400 30 4.5
12AK099614:Os07g0674100 30 4.5
13AK071960:Os06g0652400 30 4.5
14AB183706:Os07g0674100 30 4.5
15Os05g0524600:Os05g0524600 29 5.8
16AK068914:Os02g0187400 29 7.6
17Os11g0292000:Os11g0292000 29 7.6
18AF251077:Os01g0315800 28 9.9
19AK101168:Os01g0315800 28 9.9
20AK061857:Os01g0315800 28 9.9
21AB167396:Os01g0315800 28 9.9 
>AK119785:Os01g0367100 |
          Length = 340
 Score =  471 bits (1212), Expect = e-133
 Identities = 220/285 (77%), Positives = 253/285 (88%)
 Frame = +3

Query: 120 ASLAGVSHDAGVTVSTSESVGQNDLLIVGPGVLGRIVAEKWRQEHPGCKIYGQTATTDHH 299
           A++ GVS D GV ++ S+ VG+NDLLIVGPGVLGR+VAEKW++EHPGCK++GQTA+TDHH
Sbjct: 56  AAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTASTDHH 115

Query: 300 SELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGDLRVAASNWSGEGSFLFTSSTA 479
           +EL+ IGIIPSLKG    QKVPYVIFCAPP R+DDYPGD+RVAASNW+GEGSF+FTSSTA
Sbjct: 116 NELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTA 175

Query: 480 VYDCNDNGFCGEDSPCVPIGRSPRTDILLKAENVVLEAGGCALRLAGLYKKDQGPHVFWL 659
           +YDC+DN  C ED P VPIGRSPRTD+LLKAENVVLEAGGC LRLAGLYK D+G H FWL
Sbjct: 176 LYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVLRLAGLYKIDRGAHFFWL 235

Query: 660 SKGTVDARPDLIISMIHYEDAASLGIAIMKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGK 839
            KGT+D RPD II+ IHYEDAASL IAIMK+  RGR+F+GCDN+PLSRQEIMD VNRSGK
Sbjct: 236 RKGTLDTRPDHIINQIHYEDAASLAIAIMKKGHRGRIFLGCDNKPLSRQEIMDSVNRSGK 295

Query: 840 FDGKFEGFTGADGPLGKKMDNSKTRAEIGWEPKYPSFTEFLGLSN 974
           FD KF+GFTG DGPLGKKM+NS+TR+EIGWEPKYPSFTEFLGL +
Sbjct: 296 FDTKFQGFTGTDGPLGKKMENSRTRSEIGWEPKYPSFTEFLGLDS 340
to top
>AK101542:Os01g0367100 |
          Length = 340

 Score =  471 bits (1212), Expect = e-133
 Identities = 220/285 (77%), Positives = 253/285 (88%)
 Frame = +3

Query: 120 ASLAGVSHDAGVTVSTSESVGQNDLLIVGPGVLGRIVAEKWRQEHPGCKIYGQTATTDHH 299
           A++ GVS D GV ++ S+ VG+NDLLIVGPGVLGR+VAEKW++EHPGCK++GQTA+TDHH
Sbjct: 56  AAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTASTDHH 115

Query: 300 SELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGDLRVAASNWSGEGSFLFTSSTA 479
           +EL+ IGIIPSLKG    QKVPYVIFCAPP R+DDYPGD+RVAASNW+GEGSF+FTSSTA
Sbjct: 116 NELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTA 175

Query: 480 VYDCNDNGFCGEDSPCVPIGRSPRTDILLKAENVVLEAGGCALRLAGLYKKDQGPHVFWL 659
           +YDC+DN  C ED P VPIGRSPRTD+LLKAENVVLEAGGC LRLAGLYK D+G H FWL
Sbjct: 176 LYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVLRLAGLYKIDRGAHFFWL 235

Query: 660 SKGTVDARPDLIISMIHYEDAASLGIAIMKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGK 839
            KGT+D RPD II+ IHYEDAASL IAIMK+  RGR+F+GCDN+PLSRQEIMD VNRSGK
Sbjct: 236 RKGTLDTRPDHIINQIHYEDAASLAIAIMKKGHRGRIFLGCDNKPLSRQEIMDSVNRSGK 295

Query: 840 FDGKFEGFTGADGPLGKKMDNSKTRAEIGWEPKYPSFTEFLGLSN 974
           FD KF+GFTG DGPLGKKM+NS+TR+EIGWEPKYPSFTEFLGL +
Sbjct: 296 FDTKFQGFTGTDGPLGKKMENSRTRSEIGWEPKYPSFTEFLGLDS 340
to top
>AK101540:Os01g0367100 |
          Length = 340

 Score =  471 bits (1212), Expect = e-133
 Identities = 220/285 (77%), Positives = 253/285 (88%)
 Frame = +3

Query: 120 ASLAGVSHDAGVTVSTSESVGQNDLLIVGPGVLGRIVAEKWRQEHPGCKIYGQTATTDHH 299
           A++ GVS D GV ++ S+ VG+NDLLIVGPGVLGR+VAEKW++EHPGCK++GQTA+TDHH
Sbjct: 56  AAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTASTDHH 115

Query: 300 SELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGDLRVAASNWSGEGSFLFTSSTA 479
           +EL+ IGIIPSLKG    QKVPYVIFCAPP R+DDYPGD+RVAASNW+GEGSF+FTSSTA
Sbjct: 116 NELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTA 175

Query: 480 VYDCNDNGFCGEDSPCVPIGRSPRTDILLKAENVVLEAGGCALRLAGLYKKDQGPHVFWL 659
           +YDC+DN  C ED P VPIGRSPRTD+LLKAENVVLEAGGC LRLAGLYK D+G H FWL
Sbjct: 176 LYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVLRLAGLYKIDRGAHFFWL 235

Query: 660 SKGTVDARPDLIISMIHYEDAASLGIAIMKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGK 839
            KGT+D RPD II+ IHYEDAASL IAIMK+  RGR+F+GCDN+PLSRQEIMD VNRSGK
Sbjct: 236 RKGTLDTRPDHIINQIHYEDAASLAIAIMKKGHRGRIFLGCDNKPLSRQEIMDSVNRSGK 295

Query: 840 FDGKFEGFTGADGPLGKKMDNSKTRAEIGWEPKYPSFTEFLGLSN 974
           FD KF+GFTG DGPLGKKM+NS+TR+EIGWEPKYPSFTEFLGL +
Sbjct: 296 FDTKFQGFTGTDGPLGKKMENSRTRSEIGWEPKYPSFTEFLGLDS 340
to top
>AK068655:Os01g0367100 |
          Length = 340

 Score =  471 bits (1212), Expect = e-133
 Identities = 220/285 (77%), Positives = 253/285 (88%)
 Frame = +3

Query: 120 ASLAGVSHDAGVTVSTSESVGQNDLLIVGPGVLGRIVAEKWRQEHPGCKIYGQTATTDHH 299
           A++ GVS D GV ++ S+ VG+NDLLIVGPGVLGR+VAEKW++EHPGCK++GQTA+TDHH
Sbjct: 56  AAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTASTDHH 115

Query: 300 SELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGDLRVAASNWSGEGSFLFTSSTA 479
           +EL+ IGIIPSLKG    QKVPYVIFCAPP R+DDYPGD+RVAASNW+GEGSF+FTSSTA
Sbjct: 116 NELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTA 175

Query: 480 VYDCNDNGFCGEDSPCVPIGRSPRTDILLKAENVVLEAGGCALRLAGLYKKDQGPHVFWL 659
           +YDC+DN  C ED P VPIGRSPRTD+LLKAENVVLEAGGC LRLAGLYK D+G H FWL
Sbjct: 176 LYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVLRLAGLYKIDRGAHFFWL 235

Query: 660 SKGTVDARPDLIISMIHYEDAASLGIAIMKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGK 839
            KGT+D RPD II+ IHYEDAASL IAIMK+  RGR+F+GCDN+PLSRQEIMD VNRSGK
Sbjct: 236 RKGTLDTRPDHIINQIHYEDAASLAIAIMKKGHRGRIFLGCDNKPLSRQEIMDSVNRSGK 295

Query: 840 FDGKFEGFTGADGPLGKKMDNSKTRAEIGWEPKYPSFTEFLGLSN 974
           FD KF+GFTG DGPLGKKM+NS+TR+EIGWEPKYPSFTEFLGL +
Sbjct: 296 FDTKFQGFTGTDGPLGKKMENSRTRSEIGWEPKYPSFTEFLGLDS 340
to top
>AK072605:Os01g0367400 |
          Length = 258

 Score =  290 bits (742), Expect = 1e-78
 Identities = 146/190 (76%), Positives = 159/190 (83%), Gaps = 1/190 (0%)
 Frame = +3

Query: 60  PLTAASPAFSSRCRFPMASTASLAGVSHDAG-VTVSTSESVGQNDLLIVGPGVLGRIVAE 236
           P  + SP   SR     A+ AS  G S +A  + VS SE VGQ DLLIVGPGVLGRIVAE
Sbjct: 40  PTLSISPP--SRHAAIAAAAASPLGASQEASAMAVSASEGVGQYDLLIVGPGVLGRIVAE 97

Query: 237 KWRQEHPGCKIYGQTATTDHHSELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGD 416
           +W+QEHPGCKI+G TATTDHHSELT++GIIPSLKGP A QKVPYVIFCAPPYRTDDYPGD
Sbjct: 98  RWQQEHPGCKIFGHTATTDHHSELTQLGIIPSLKGP-AVQKVPYVIFCAPPYRTDDYPGD 156

Query: 417 LRVAASNWSGEGSFLFTSSTAVYDCNDNGFCGEDSPCVPIGRSPRTDILLKAENVVLEAG 596
           LRVAASNW+G+GSFLFTSSTAVYDC+DNG C EDSPCVPIGRSPRTD+LLKAEN VLEAG
Sbjct: 157 LRVAASNWNGQGSFLFTSSTAVYDCSDNGLCSEDSPCVPIGRSPRTDVLLKAENAVLEAG 216

Query: 597 GCALRLAGLY 626
           G  LRL GLY
Sbjct: 217 GSVLRLVGLY 226
to top
>AK105060:Os01g0367100 |
          Length = 137

 Score =  233 bits (594), Expect = 2e-61
 Identities = 110/137 (80%), Positives = 122/137 (89%)
 Frame = +3

Query: 564 LKAENVVLEAGGCALRLAGLYKKDQGPHVFWLSKGTVDARPDLIISMIHYEDAASLGIAI 743
           LKAENVVLEAGGC LRLAGLYK D+G H FWL KGT+D RPD II+ IHYEDAASL IAI
Sbjct: 1   LKAENVVLEAGGCVLRLAGLYKIDRGAHFFWLRKGTLDTRPDHIINQIHYEDAASLAIAI 60

Query: 744 MKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGKFDGKFEGFTGADGPLGKKMDNSKTRAEI 923
           MK+  RGR+F+GCDN+PLSRQEIMD VNRSGKFD KF+GFTG DGPLGKKM+NS+TR+EI
Sbjct: 61  MKKGHRGRIFLGCDNKPLSRQEIMDSVNRSGKFDTKFQGFTGTDGPLGKKMENSRTRSEI 120

Query: 924 GWEPKYPSFTEFLGLSN 974
           GWEPKYPSFTEFLGL +
Sbjct: 121 GWEPKYPSFTEFLGLDS 137
to top
>AK063804:Os01g0367400 |
          Length = 288

 Score =  229 bits (583), Expect = 4e-60
 Identities = 116/160 (72%), Positives = 130/160 (81%), Gaps = 1/160 (0%)
 Frame = +3

Query: 60  PLTAASPAFSSRCRFPMASTASLAGVSHDAG-VTVSTSESVGQNDLLIVGPGVLGRIVAE 236
           P  + SP   SR     A+ AS  G S +A  + VS SE VGQ DLLIVGPGVLGRIVAE
Sbjct: 53  PTLSISPP--SRHAAIAAAAASPLGASQEASAMAVSASEGVGQYDLLIVGPGVLGRIVAE 110

Query: 237 KWRQEHPGCKIYGQTATTDHHSELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGD 416
           +W+QEHPGCKI+G TATTDHHSELT++GIIPSLKGP A QKVPYVIFCAPPYRTDDYPGD
Sbjct: 111 RWQQEHPGCKIFGHTATTDHHSELTQLGIIPSLKGP-AVQKVPYVIFCAPPYRTDDYPGD 169

Query: 417 LRVAASNWSGEGSFLFTSSTAVYDCNDNGFCGEDSPCVPI 536
           LRVAASNW+G+GSFLFTSSTAVYDC+DNG C ED+  + I
Sbjct: 170 LRVAASNWNGQGSFLFTSSTAVYDCSDNGLCSEDAASLAI 209



 Score =  168 bits (425), Expect = 8e-42
 Identities = 87/123 (70%), Positives = 95/123 (77%)
 Frame = +3

Query: 606 LRLAGLYKKDQGPHVFWLSKGTVDARPDLIISMIHYEDAASLGIAIMKRRLRGRVFVGCD 785
           LR+A      QG  +F  S    D   + + S    EDAASL IAIMKRRLR RVFVGCD
Sbjct: 170 LRVAASNWNGQGSFLFTSSTAVYDCSDNGLCS----EDAASLAIAIMKRRLRARVFVGCD 225

Query: 786 NQPLSRQEIMDRVNRSGKFDGKFEGFTGADGPLGKKMDNSKTRAEIGWEPKYPSFTEFLG 965
           NQPLSRQEIMD VNRSGKFD KF+GFTG DGPLGK+M+NSKTRAEIGW+PKYPSFTEFLG
Sbjct: 226 NQPLSRQEIMDLVNRSGKFDTKFQGFTGTDGPLGKRMENSKTRAEIGWQPKYPSFTEFLG 285

Query: 966 LSN 974
           LSN
Sbjct: 286 LSN 288
to top
>Os11g0644100:Os11g0644100 |
          Length = 397

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 24/88 (27%), Positives = 38/88 (43%)
 Frame = +3

Query: 300 SELTKIGIIPSLKGPRADQKVPYVIFCAPPYRTDDYPGDLRVAASNWSGEGSFLFTSSTA 479
           SEL  + ++P     R   ++P  +   P  R       L +A +  SG+    F+    
Sbjct: 103 SELASLSLVPG----RVSGELPPAVAALPSLRF------LALAGNLLSGDLPATFSPMLR 152

Query: 480 VYDCNDNGFCGEDSPCVPIGRSPRTDIL 563
             D + N F G   P +P+ RS RT +L
Sbjct: 153 TVDLSKNSFSGRIPPSLPLIRSLRTLVL 180
to top
>AK109046: |
          Length = 350

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 699 SMIHYEDAASLGIAIMKRRLRGRVFVGCDNQPLSRQEIMDRVNRSGKFDG-KFEGFTGAD 875
           S  + +D     + +M+  +R  + +G +            ++ +GK D  K     G +
Sbjct: 224 SFCYIDDCVEGVLRLMRSDVREPINIGSEEMVSMNDMAHLVLDFAGKKDSTKLHHIPGPE 283

Query: 876 GPLGKKMDNSKTRAEIGWEP 935
           G  G+  DN+  R ++GW P
Sbjct: 284 GVRGRNSDNTLIREKLGWAP 303
to top
>AK120997:Os06g0652400 |
          Length = 328

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 705 IHYEDAASLGIAIMKRRLR-GRVFVGCDNQPLSRQEIMDRVNRSGKFDGKFEGFTGA-DG 878
           +H +D A   I +M        V VG  ++ ++ +E+ + V     F GK    +   DG
Sbjct: 228 LHVDDLADAVIFLMDHYSGLEHVNVGSGSE-VTIKELAELVKEVVGFQGKLVWDSSKPDG 286

Query: 879 PLGKKMDNSKTRAEIGWEPKYP 944
              K MD+SK + E+GW+PK P
Sbjct: 287 TPRKLMDSSKIQ-EMGWKPKVP 307
to top
>AK103529:Os06g0652400 |
          Length = 328

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 705 IHYEDAASLGIAIMKRRLR-GRVFVGCDNQPLSRQEIMDRVNRSGKFDGKFEGFTGA-DG 878
           +H +D A   I +M        V VG  ++ ++ +E+ + V     F GK    +   DG
Sbjct: 228 LHVDDLADAVIFLMDHYSGLEHVNVGSGSE-VTIKELAELVKEVVGFQGKLVWDSSKPDG 286

Query: 879 PLGKKMDNSKTRAEIGWEPKYP 944
              K MD+SK + E+GW+PK P
Sbjct: 287 TPRKLMDSSKIQ-EMGWKPKVP 307
to top
>AK099614:Os07g0674100 |
          Length = 166

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D S+ +  +GWEPK P
Sbjct: 113 ADDPHKRKPDISRAKELLGWEPKIP 137
to top
>AK071960:Os06g0652400 |
          Length = 328

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +3

Query: 705 IHYEDAASLGIAIMKRRLR-GRVFVGCDNQPLSRQEIMDRVNRSGKFDGKFEGFTGA-DG 878
           +H +D A   I +M        V VG  ++ ++ +E+ + V     F GK    +   DG
Sbjct: 228 LHVDDLADAVIFLMDHYSGLEHVNVGSGSE-VTIKELAELVKEVVGFQGKLVWDSSKPDG 286

Query: 879 PLGKKMDNSKTRAEIGWEPKYP 944
              K MD+SK + E+GW+PK P
Sbjct: 287 TPRKLMDSSKIQ-EMGWKPKVP 307
to top
>AB183706:Os07g0674100 |
          Length = 445

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D S+ +  +GWEPK P
Sbjct: 392 ADDPHKRKPDISRAKELLGWEPKIP 416
to top
>Os05g0524600:Os05g0524600 |
          Length = 886

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 1049 LYPLSNRLYRFISGIRGILQLAKMSIAETKE 957
            L PL N+LY  ++  +G+LQLA+++   + E
Sbjct: 189  LRPLMNKLYPQVNATQGLLQLARLNFGPSDE 219
to top
>AK068914:Os02g0187400 |
          Length = 703

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 5   SNLQIHGVDLPLPPTISAPIDCCISSVLIPLPLPDG 112
           +N  + GV    PPT S  + C  ++   PLP P G
Sbjct: 317 ANFSVDGVITDFPPTASGAVACLANTKGNPLPPPGG 352
to top
>Os11g0292000:Os11g0292000 |
          Length = 901

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 829 GAGNLTASL-RASQGQTVHWGRRWIIPKLGLRSAG 930
           G GN  A L +A  G  V WGRR ++P  G    G
Sbjct: 834 GGGNGAARLWQAPSGAAVRWGRRRLLPSHGHEGGG 868
to top
>AF251077:Os01g0315800 |
          Length = 225

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D ++ +  +GWEPK P
Sbjct: 179 ADDPHKRKPDITRAKELLGWEPKVP 203
to top
>AK101168:Os01g0315800 |
          Length = 425

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D ++ +  +GWEPK P
Sbjct: 379 ADDPHKRKPDITRAKELLGWEPKVP 403
to top
>AK061857:Os01g0315800 |
          Length = 225

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D ++ +  +GWEPK P
Sbjct: 179 ADDPHKRKPDITRAKELLGWEPKVP 203
to top
>AB167396:Os01g0315800 |
          Length = 425

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 870 ADGPLGKKMDNSKTRAEIGWEPKYP 944
           AD P  +K D ++ +  +GWEPK P
Sbjct: 379 ADDPHKRKPDITRAKELLGWEPKVP 403


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,996,021
Number of extensions: 943243
Number of successful extensions: 2497
Number of sequences better than 10.0: 21
Number of HSP's gapped: 2494
Number of HSP's successfully gapped: 22
Length of query: 403
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 300
Effective length of database: 11,275,632
Effective search space: 3382689600
Effective search space used: 3382689600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top