ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbah59a20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017973.1| Zea mays clone EL01N0524D09.c mRNA sequence Length = 1387 Score = 438 bits (221), Expect = e-119 Identities = 363/411 (88%) Strand = Plus / Minus Query: 238 gttctgggatggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggcc 297 ||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 1063 gttctgggacggcgggttgatggccacccacagcagcgagatggtgatggagaggaggcc 1004 Query: 298 ggaccagacgaagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaa 357 | ||||||||||||||||||||||||||| || | |||||||| |||||||||||||| Sbjct: 1003 cgcccagacgaagacgatggtcggcgtgcggcccctccgccccatcaggcccttggcgaa 944 Query: 358 cgggtacaggtgagccagtacccagaagctgaagaagacaccgcccaggagcttgctcca 417 |||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 943 cgggtacaggtgcgccagcacccagaagctgaagaagacgccgcccagcagcttgctcca 884 Query: 418 ctgcgggatctcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgac 477 ||||||||||||||||||||||||||||||||| ||||| || ||| | || ||||| || Sbjct: 883 ctgcgggatctcgctgtagatggtgcggctgaacccgaccgcgatgccaatcaggttcac 824 Query: 478 catcatgatgacaatgggtgggatcatgagggacgtccacttgacgatgtagaggtcggc 537 ||||||||| |||||||| |||||||| || |||||||||||||||||||| ||||| || Sbjct: 823 catcatgatcacaatgggcgggatcatcagcgacgtccacttgacgatgtacaggtccgc 764 Query: 538 gaactcatcgttttcgtcgtctgcgccggacttggatgtgagcgtgaaggagatctcgat 597 |||||| |||| ||||||| |||| |||||||| || |||||||||||||||||||| Sbjct: 763 gaactcgtcgtccacgtcgtcgccgcccgacttggacgtcagcgtgaaggagatctcgat 704 Query: 598 gccagcaatgaccttgaggaggccctgcancacagcggcnaggtgagcgct 648 ||| || | ||||| || |||||||||| ||| || || ||||| ||||| Sbjct: 703 gcccgccaccaccttcagcaggccctgcagcacggccgccaggtgcgcgct 653
>gb|AY109318.1| Zea mays PCO067099 mRNA sequence Length = 1266 Score = 418 bits (211), Expect = e-114 Identities = 360/411 (87%) Strand = Plus / Minus Query: 238 gttctgggatggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggcc 297 ||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||| Sbjct: 957 gttctgggacggcgggttgatggccacccacagcagcgagatggtgatggagaggaggcc 898 Query: 298 ggaccagacgaagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaa 357 | ||||||||||||||||||||||||||| || | |||||||| |||||||||||||| Sbjct: 897 cgcccagacgaagacgatggtcggcgtgcggcccctccgccccatcaggcccttggcgaa 838 Query: 358 cgggtacaggtgagccagtacccagaagctgaagaagacaccgcccaggagcttgctcca 417 |||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct: 837 cgggtacaggtgcgccagcacccagaagctgaagaagacgccgcccagcagcttgctcca 778 Query: 418 ctgcgggatctcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgac 477 ||||||||||||||||||||||||||||||||| ||||| || ||| |||| ||||| || Sbjct: 777 ctgcgggatctcgctgtagatggtgcggctgaacccgaccgcgatgccgatcaggttcac 718 Query: 478 catcatgatgacaatgggtgggatcatgagggacgtccacttgacgatgtagaggtcggc 537 ||||||||| || ||||| |||||||| || |||||||||||| ||||||| ||||| || Sbjct: 717 catcatgatcacgatgggcgggatcatcagcgacgtccacttgncgatgtacaggtccgc 658 Query: 538 gaactcatcgttttcgtcgtctgcgccggacttggatgtgagcgtgaaggagatctcgat 597 |||||| |||| ||||||| |||| |||||||| | ||| |||||||||||||||| Sbjct: 657 gaactcgtcgtccacgtcgtcgccgcccgacttggacntcagcatgaaggagatctcgat 598 Query: 598 gccagcaatgaccttgaggaggccctgcancacagcggcnaggtgagcgct 648 ||| || | ||||| || |||||||||| ||| || || ||||| ||||| Sbjct: 597 gcccgccaccaccttcagcaggccctgcagcacggccgccaggtgcgcgct 547
>ref|NM_185396.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3968 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Minus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 3827 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 3768 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 3767 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 3708 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 3707 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 3648 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 3647 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 3588 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 3587 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 3528 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 3527 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 3468 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 3467 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 3408 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 3407 aaggtgggcgct 3396
>tpg|BK000090.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D2 gene, complete cds Length = 5000 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Minus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 4546 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 4487 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 4486 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 4427 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 4426 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 4367 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 4366 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 4307 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 4306 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 4247 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 4246 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 4187 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 4186 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 4127 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 4126 aaggtgggcgct 4115
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Plus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 659522 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 659581 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 659582 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 659641 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 659642 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 659701 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 659702 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 659761 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 659762 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 659821 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 659822 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 659881 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 659882 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 659941 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 659942 aaggtgggcgct 659953 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 275 gagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcgg 334 |||| |||||||| || |||||||| ||||||| |||||||||| ||||| || |||||| Sbjct: 13260629 gagacggtgatggagatgaggccggcccagacgtagacgatggtgggcgtccggccgcgg 13260570 Query: 335 cgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaag 394 || |||||||||||||||||||||||||| ||| || || |||||||||||||||||| Sbjct: 13260569 cggcccatgaggcccttggcgaacgggtagtagtgcgcgagcacccagaagctgaagaag 13260510 Query: 395 acaccgcccaggagcttgctccactgcgggatctc 429 | ||||| || |||||||| ||||||||||||| Sbjct: 13260509 ccgccgccgagcagcttgctgtactgcgggatctc 13260475 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 575 gtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcg 634 ||||||||||||||||||||||| || || | |||||||| |||||||||| ||| || Sbjct: 13260329 gtgagcgtgaaggagatctcgatcccggccaccaccttgagcaggccctgcagcaccgcc 13260270 Query: 635 gcnaggtg 642 || ||||| Sbjct: 13260269 gccaggtg 13260262 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 atgaactagtatgatccatga 58 ||||||||||||||||||||| Sbjct: 1550611 atgaactagtatgatccatga 1550631
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Plus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 65950 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 66009 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 66010 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 66069 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 66070 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 66129 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 66130 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 66189 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 66190 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 66249 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 66250 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 66309 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 66310 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 66369 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 66370 aaggtgggcgct 66381
>dbj|AK105393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B04, full insert sequence Length = 4089 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Minus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 3716 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 3657 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 3656 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 3597 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 3596 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 3537 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 3536 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 3477 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 3476 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 3417 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 3416 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 3357 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 3356 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 3297 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 3296 aaggtgggcgct 3285
>dbj|AK102695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F21, full insert sequence Length = 2757 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Minus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 2522 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 2463 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 2462 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 2403 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 2402 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 2343 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 2342 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 2283 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 2282 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 2223 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 2222 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 2163 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 2162 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 2103 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 2102 aaggtgggcgct 2091
>dbj|AK102134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085F12, full insert sequence Length = 3968 Score = 353 bits (178), Expect = 5e-94 Identities = 368/432 (85%) Strand = Plus / Minus Query: 217 gaaggagcctccgatctgcgagttctgggatggcgggttgatggcgacccacagcaggga 276 ||||||||| || |||||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 3827 gaaggagccgcctatctgcgagttctgtgacggcggattgatggcaacccacagcaatga 3768 Query: 277 gatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcg 336 |||||||||||| |||||||| ||||||||||||||||||||||| || || || | | Sbjct: 3767 gatggtgatggcaaggaggccagaccagacgaagacgatggtcggtgttcgtcctctcct 3708 Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||||||| || Sbjct: 3707 tcccattagccccttggcgaaggggtaaaggtgagccagcacccagaagctgaagaacac 3648 Query: 397 accgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctgaagccgac 456 ||||| ||||||||||||||||| ||||| || ||||| || || | |||||| ||||| Sbjct: 3647 gccgccgaggagcttgctccactgagggatttcactgtatattgtcctgctgaacccgac 3588 Query: 457 agctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagggacgtcca 516 ||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| Sbjct: 3587 agcgatggcgatcaggttaaccatcatgatgacgatcggtgggatcatgagtgatgtcca 3528 Query: 517 cttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggacttggatgt 576 ||||||||||||||| || || ||||| |||| | | || ||| | || || |||||||| Sbjct: 3527 cttgacgatgtagagatcagcaaactcgtcgtctgcttcatctcctccagatttggatgt 3468 Query: 577 gagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcggc 636 |||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| || Sbjct: 3467 cagcgtgaaggagatctcgataccagcaatcaccttgagaagaccctgaagaacagcagc 3408 Query: 637 naggtgagcgct 648 ||||| ||||| Sbjct: 3407 aaggtgggcgct 3396
>ref|NM_197900.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0035H01.10), mRNA Length = 3384 Score = 250 bits (126), Expect = 5e-63 Identities = 316/380 (83%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 3314 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 3255 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 3254 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 3195 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 3194 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 3135 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 3134 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 3075 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 3074 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 3015 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 3014 ttggaggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 2955 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 2954 acggcggcgaggtgggcgct 2935
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 250 bits (126), Expect = 5e-63 Identities = 316/380 (83%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 61192 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 61133 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 61132 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 61073 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 61072 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 61013 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 61012 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 60953 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 60952 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 60893 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 60892 ttggaggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 60833 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 60832 acggcggcgaggtgggcgct 60813
>tpg|BK000089.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like D1 gene, complete cds Length = 4188 Score = 250 bits (126), Expect = 5e-63 Identities = 316/380 (83%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 3670 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 3611 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 3610 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 3551 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 3550 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 3491 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 3490 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 3431 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 3430 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 3371 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 3370 ttggaggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 3311 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 3310 acggcggcgaggtgggcgct 3291
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 250 bits (126), Expect = 5e-63 Identities = 316/380 (83%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 22545474 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 22545415 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 22545414 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 22545355 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 22545354 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 22545295 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 22545294 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 22545235 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 22545234 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 22545175 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 22545174 ttggaggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 22545115 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 22545114 acggcggcgaggtgggcgct 22545095
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 250 bits (126), Expect = 5e-63 Identities = 316/380 (83%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 22557942 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 22557883 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 22557882 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 22557823 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 22557822 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 22557763 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 22557762 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 22557703 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 22557702 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 22557643 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 ||||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 22557642 ttggaggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 22557583 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 22557582 acggcggcgaggtgggcgct 22557563
>dbj|AK110534.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-A07, full insert sequence Length = 1144 Score = 242 bits (122), Expect = 1e-60 Identities = 315/380 (82%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 706 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 647 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 646 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 587 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgtagatggtgcggctg 448 |||||||| || || || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 586 aagaagactccaccgagaagcttgctccactgcgggatggtgctgtagatggtgcggctg 527 Query: 449 aagccgacagctatggcgatgaggttgaccatcatgatgacaatgggtgggatcatgagg 508 |||||||| || ||||||| |||||||| ||| |||||| | || || ||||||||| Sbjct: 526 aagccgacggcgatggcgacgaggttgatcattatgatggtgagcggcggtatcatgagg 467 Query: 509 gacgtccacttgacgatgtagaggtcggcgaactcatcgttttcgtcgtctgcgccggac 568 |||||||||||||| |||||| ||||||||||| |||| ||||||| || | Sbjct: 466 gacgtccacttgaccgcgtagagctcggcgaactcgtcgtcgacgtcgtcgccgagctgc 407 Query: 569 ttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcanc 628 |||| ||||| |||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 406 ttgggggtgagggtgaaggagatctcgatgccggcgatgaccttgagaaggccctgcagg 347 Query: 629 acagcggcnaggtgagcgct 648 || ||||| ||||| ||||| Sbjct: 346 acggcggcgaggtgggcgct 327
>ref|XM_481802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3348 Score = 180 bits (91), Expect = 4e-42 Identities = 238/287 (82%) Strand = Plus / Minus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||| ||||||||||||| |||||||||| |||||| | ||||||||| ||||||||| Sbjct: 3296 ggcgggctgatggcgacccagagcagggagacggtgattgagaggaggcccgaccagacg 3237 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 3236 aagacgatggtgggcgtcttgccgcgccgccccatgaggcccttggcgaaggggttgagg 3177 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || || || |||||||||||||||||| | ||||| | || ||| | |||| ||||| | Sbjct: 3176 tgggcgagcacccagaagctgaagaagccgccgccgatgaacttcccccaccgcgggttg 3117 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 |||||||||||||| | |||| ||| || |||||||||| ||| |||||| |||| Sbjct: 3116 tcgctgtagatggtcctcgcgaaggcgaaggcgatggcgatgatgttcaccatcccgatg 3057 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagaggtc 534 ||||| ||||||| || |||| ||||||||||||||||||||| Sbjct: 3056 gtgatgggcgggatcagcagcgacgaccacttgacgatgtagaggtc 3010
>tpg|BK000093.1| TPA: TPA_exp: Oryza sativa cellulose synthase-like D3 gene, complete cds Length = 5547 Score = 180 bits (91), Expect = 4e-42 Identities = 238/287 (82%) Strand = Plus / Minus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||| ||||||||||||| |||||||||| |||||| | ||||||||| ||||||||| Sbjct: 4478 ggcgggctgatggcgacccagagcagggagacggtgattgagaggaggcccgaccagacg 4419 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 4418 aagacgatggtgggcgtcttgccgcgccgccccatgaggcccttggcgaaggggttgagg 4359 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || || || |||||||||||||||||| | ||||| | || ||| | |||| ||||| | Sbjct: 4358 tgggcgagcacccagaagctgaagaagccgccgccgatgaacttcccccaccgcgggttg 4299 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 |||||||||||||| | |||| ||| || |||||||||| ||| |||||| |||| Sbjct: 4298 tcgctgtagatggtcctcgcgaaggcgaaggcgatggcgatgatgttcaccatcccgatg 4239 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagaggtc 534 ||||| ||||||| || |||| ||||||||||||||||||||| Sbjct: 4238 gtgatgggcgggatcagcagcgacgaccacttgacgatgtagaggtc 4192
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 180 bits (91), Expect = 4e-42 Identities = 238/287 (82%) Strand = Plus / Plus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||| ||||||||||||| |||||||||| |||||| | ||||||||| ||||||||| Sbjct: 15635217 ggcgggctgatggcgacccagagcagggagacggtgattgagaggaggcccgaccagacg 15635276 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 15635277 aagacgatggtgggcgtcttgccgcgccgccccatgaggcccttggcgaaggggttgagg 15635336 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || || || |||||||||||||||||| | ||||| | || ||| | |||| ||||| | Sbjct: 15635337 tgggcgagcacccagaagctgaagaagccgccgccgatgaacttcccccaccgcgggttg 15635396 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 |||||||||||||| | |||| ||| || |||||||||| ||| |||||| |||| Sbjct: 15635397 tcgctgtagatggtcctcgcgaaggcgaaggcgatggcgatgatgttcaccatcccgatg 15635456 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagaggtc 534 ||||| ||||||| || |||| ||||||||||||||||||||| Sbjct: 15635457 gtgatgggcgggatcagcagcgacgaccacttgacgatgtagaggtc 15635503
>dbj|AP004459.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E11 Length = 150200 Score = 180 bits (91), Expect = 4e-42 Identities = 238/287 (82%) Strand = Plus / Plus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||| ||||||||||||| |||||||||| |||||| | ||||||||| ||||||||| Sbjct: 69372 ggcgggctgatggcgacccagagcagggagacggtgattgagaggaggcccgaccagacg 69431 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| Sbjct: 69432 aagacgatggtgggcgtcttgccgcgccgccccatgaggcccttggcgaaggggttgagg 69491 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || || || |||||||||||||||||| | ||||| | || ||| | |||| ||||| | Sbjct: 69492 tgggcgagcacccagaagctgaagaagccgccgccgatgaacttcccccaccgcgggttg 69551 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 |||||||||||||| | |||| ||| || |||||||||| ||| |||||| |||| Sbjct: 69552 tcgctgtagatggtcctcgcgaaggcgaaggcgatggcgatgatgttcaccatcccgatg 69611 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagaggtc 534 ||||| ||||||| || |||| ||||||||||||||||||||| Sbjct: 69612 gtgatgggcgggatcagcagcgacgaccacttgacgatgtagaggtc 69658
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 167 bits (84), Expect = 6e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||||||||| |||||| || ||||||||| | |||| || |||||| ||||||||| Sbjct: 22636884 ggcgggttgatgtagacccagaggagggagatgatcatggagatgaggcccgaccagacg 22636943 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||| ||| |||||||| || | ||||||||||||||||||||| ||| Sbjct: 22636944 aagacgatggtgggcacgcggccgcggcggccgaggaggcccttggcgaacgggtagagg 22637003 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || ||| |||||||||||||||||| | ||||| || ||||||||||||||||||| | Sbjct: 22637004 tggcacagcacccagaagctgaagaaggcgccgccgagcagcttgctccactgcgggaac 22637063 Query: 428 tcgctgta 435 |||||||| Sbjct: 22637064 tcgctgta 22637071 Score = 54.0 bits (27), Expect = 6e-04 Identities = 67/81 (82%) Strand = Plus / Plus Query: 568 cttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcan 627 |||||| || |||||||||||||| || | ||| || || |||||||| |||||||||| Sbjct: 22637234 cttggaggtcagcgtgaaggagatgtccacgccggcgatcaccttgagtaggccctgcag 22637293 Query: 628 cacagcggcnaggtgagcgct 648 ||| ||||| |||| ||||| Sbjct: 22637294 cacggcggccgggtgcgcgct 22637314
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 167 bits (84), Expect = 6e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||||||||| |||||| || ||||||||| | |||| || |||||| ||||||||| Sbjct: 22565075 ggcgggttgatgtagacccagaggagggagatgatcatggagatgaggcccgaccagacg 22565134 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||| ||| |||||||| || | ||||||||||||||||||||| ||| Sbjct: 22565135 aagacgatggtgggcacgcggccgcggcggccgaggaggcccttggcgaacgggtagagg 22565194 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || ||| |||||||||||||||||| | ||||| || ||||||||||||||||||| | Sbjct: 22565195 tggcacagcacccagaagctgaagaaggcgccgccgagcagcttgctccactgcgggaac 22565254 Query: 428 tcgctgta 435 |||||||| Sbjct: 22565255 tcgctgta 22565262 Score = 54.0 bits (27), Expect = 6e-04 Identities = 67/81 (82%) Strand = Plus / Plus Query: 568 cttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcan 627 |||||| || |||||||||||||| || | ||| || || |||||||| |||||||||| Sbjct: 22565425 cttggaggtcagcgtgaaggagatgtccacgccggcgatcaccttgagtaggccctgcag 22565484 Query: 628 cacagcggcnaggtgagcgct 648 ||| ||||| |||| ||||| Sbjct: 22565485 cacggcggccgggtgcgcgct 22565505
>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138368 Score = 167 bits (84), Expect = 6e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 248 ggcgggttgatggcgacccacagcagggagatggtgatggcgaggaggccggaccagacg 307 |||||||||||| |||||| || ||||||||| | |||| || |||||| ||||||||| Sbjct: 82004 ggcgggttgatgtagacccagaggagggagatgatcatggagatgaggcccgaccagacg 82063 Query: 308 aagacgatggtcggcgtgcgcccgcggcgccccatgaggcccttggcgaacgggtacagg 367 ||||||||||| ||| ||| |||||||| || | ||||||||||||||||||||| ||| Sbjct: 82064 aagacgatggtgggcacgcggccgcggcggccgaggaggcccttggcgaacgggtagagg 82123 Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 || ||| |||||||||||||||||| | ||||| || ||||||||||||||||||| | Sbjct: 82124 tggcacagcacccagaagctgaagaaggcgccgccgagcagcttgctccactgcgggaac 82183 Query: 428 tcgctgta 435 |||||||| Sbjct: 82184 tcgctgta 82191 Score = 54.0 bits (27), Expect = 6e-04 Identities = 67/81 (82%) Strand = Plus / Plus Query: 568 cttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcan 627 |||||| || |||||||||||||| || | ||| || || |||||||| |||||||||| Sbjct: 82354 cttggaggtcagcgtgaaggagatgtccacgccggcgatcaccttgagtaggccctgcag 82413 Query: 628 cacagcggcnaggtgagcgct 648 ||| ||||| |||| ||||| Sbjct: 82414 cacggcggccgggtgcgcgct 82434
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 275 gagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcgg 334 |||| |||||||| || |||||||| ||||||| |||||||||| ||||| || |||||| Sbjct: 22439 gagacggtgatggagatgaggccggcccagacgtagacgatggtgggcgtccggccgcgg 22380 Query: 335 cgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaag 394 || |||||||||||||||||||||||||| ||| || || |||||||||||||||||| Sbjct: 22379 cggcccatgaggcccttggcgaacgggtagtagtgcgcgagcacccagaagctgaagaag 22320 Query: 395 acaccgcccaggagcttgctccactgcgggatctc 429 | ||||| || |||||||| ||||||||||||| Sbjct: 22319 ccgccgccgagcagcttgctgtactgcgggatctc 22285 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 575 gtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcg 634 ||||||||||||||||||||||| || || | |||||||| |||||||||| ||| || Sbjct: 22139 gtgagcgtgaaggagatctcgatcccggccaccaccttgagcaggccctgcagcaccgcc 22080 Query: 635 gcnaggtg 642 || ||||| Sbjct: 22079 gccaggtg 22072
>dbj|AK072260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B09, full insert sequence Length = 3633 Score = 141 bits (71), Expect = 3e-30 Identities = 134/155 (86%) Strand = Plus / Minus Query: 275 gagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcgg 334 |||| |||||||| || |||||||| ||||||| |||||||||| ||||| || |||||| Sbjct: 3193 gagacggtgatggagatgaggccggcccagacgtagacgatggtgggcgtccggccgcgg 3134 Query: 335 cgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaag 394 || |||||||||||||||||||||||||| ||| || || |||||||||||||||||| Sbjct: 3133 cggcccatgaggcccttggcgaacgggtagtagtgcgcgagcacccagaagctgaagaag 3074 Query: 395 acaccgcccaggagcttgctccactgcgggatctc 429 | ||||| || |||||||| ||||||||||||| Sbjct: 3073 ccgccgccgagcagcttgctgtactgcgggatctc 3039 Score = 60.0 bits (30), Expect = 1e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 575 gtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcancacagcg 634 ||||||||||||||||||||||| || || | |||||||| |||||||||| ||| || Sbjct: 2893 gtgagcgtgaaggagatctcgatcccggccaccaccttgagcaggccctgcagcaccgcc 2834 Query: 635 gcnaggtg 642 || ||||| Sbjct: 2833 gccaggtg 2826
>gb|AF435644.1| Oryza sativa CSLD4 mRNA, partial cds Length = 1196 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 |||||||| || | ||||||||||||||||||||| ||||| ||| |||||||||||| Sbjct: 1192 ccgcggcggccgaggaggcccttggcgaacgggtagaggtggcacagcacccagaagctg 1133 Query: 389 aagaagacaccgcccaggagcttgctccactgcgggatctcgctgta 435 |||||| | ||||| || ||||||||||||||||||| ||||||||| Sbjct: 1132 aagaaggcgccgccgagcagcttgctccactgcgggaactcgctgta 1086 Score = 54.0 bits (27), Expect = 6e-04 Identities = 67/81 (82%) Strand = Plus / Minus Query: 568 cttggatgtgagcgtgaaggagatctcgatgccagcaatgaccttgaggaggccctgcan 627 |||||| || |||||||||||||| || | ||| || || |||||||| |||||||||| Sbjct: 923 cttggaggtcagcgtgaaggagatgtccacgccggcgatcaccttgagtaggccctgcag 864 Query: 628 cacagcggcnaggtgagcgct 648 ||| ||||| |||| ||||| Sbjct: 863 cacggcggccgggtgcgcgct 843
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 95.6 bits (48), Expect = 2e-16 Identities = 108/128 (84%) Strand = Plus / Minus Query: 269 agcagggagatggtgatggcgaggaggccggaccagacgaagacgatggtcggcgtgcgc 328 |||| ||||||||||||||||| |||||| ||||||||| |||||||||| || || | Sbjct: 143 agcaaggagatggtgatggcgacgaggccagaccagacgtagacgatggtgggtgtcctt 84 Query: 329 ccgcggcgccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctg 388 || | | |||||||||||||||||||| ||||| || || || || |||||||||||| Sbjct: 83 cccctcctgcccatgaggcccttggcgaaggggtagagatgcgcgaggacccagaagctg 24 Query: 389 aagaagac 396 |||||||| Sbjct: 23 aagaagac 16
>ref|NM_111175.2| Arabidopsis thaliana CSLD3 (CELLULOSE SYNTHASE-LIKE 3); cellulose synthase/ transferase, transferring glycosyl groups AT3G03050 (CSLD3) mRNA, complete cds Length = 4206 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Minus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 3774 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 3715 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 3714 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 3655 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 3654 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 3611
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Plus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 89290 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 89349 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 89350 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 89409 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 89410 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 89453
>gb|AY039996.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit (At3g03050) mRNA, complete cds Length = 3438 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Minus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 3275 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 3216 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 3215 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 3156 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 3155 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 3112
>gb|AF360180.1| Arabidopsis thaliana putative cellulose synthase catalytic subunit (At3g03050) mRNA, complete cds Length = 3962 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Minus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 3527 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 3468 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 3467 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 3408 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 3407 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 3364
>gb|AF232907.1|AF232907 Arabidopsis thaliana cellulose synthase-like CSLD3 (CslD3) mRNA, complete cds Length = 3827 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Minus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 3523 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 3464 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 3463 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 3404 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 3403 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 3360
>emb|AJ297948.1|ATH297948 Arabidopsis thaliana CSLD3 gene for cellulose synthase-like protein, exons 1-3 Length = 5385 Score = 79.8 bits (40), Expect = 1e-11 Identities = 133/164 (81%) Strand = Plus / Minus Query: 368 tgagccagtacccagaagctgaagaagacaccgcccaggagcttgctccactgcgggatc 427 ||||||||||||||||| |||||||| || || || | | ||| ||||||||||| ||| Sbjct: 4799 tgagccagtacccagaaactgaagaacactcctccaatcaacttactccactgcggaatc 4740 Query: 428 tcgctgtagatggtgcggctgaagccgacagctatggcgatgaggttgaccatcatgatg 487 | ||||| || || | ||| || ||||| || |||||||| ||||| ||||||||||| Sbjct: 4739 acactgtatatcgtcctgctaaacccgaccgcgatggcgattaggttcaccatcatgatt 4680 Query: 488 acaatgggtgggatcatgagggacgtccacttgacgatgtagag 531 || ||||||||||||||||| ||||| || || |||||||| Sbjct: 4679 gtgattggtgggatcatgagggatgtccatttcacaatgtagag 4636
>gb|AY372245.1| Zea mays cellulose synthase catalytic subunit 11 (CesA11) mRNA, complete cds Length = 3231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 286 ggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcgccccatgag 345 |||||||||| ||||||||| | ||||||||||||||||| |||| |||||||| Sbjct: 2879 ggcgaggaggacggaccagagcaccacgatggtcggcgtgcggttctggcggcccatgag 2820 Query: 346 gcccttggcgaacgggtacaggtg 369 |||||| ||||||||||||||| Sbjct: 2819 acccttgaggaacgggtacaggtg 2796
>gb|AY106476.1| Zea mays PCO143801 mRNA sequence Length = 833 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 286 ggcgaggaggccggaccagacgaagacgatggtcggcgtgcgcccgcggcgccccatgag 345 |||||||||| ||||||||| | ||||||||||||||||| |||| |||||||| Sbjct: 482 ggcgaggaggacggaccagagcaccacgatggtcggcgtgcggttctggcggcccatgag 423 Query: 346 gcccttggcgaacgggtacaggtg 369 |||||| ||||||||||||||| Sbjct: 422 acccttgaggaacgggtacaggtg 399
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 338 cccatgaggcccttggcgaacgggtacaggtg 369 ||||||||||||||| ||||||||||||||| Sbjct: 3411 cccatgaggcccttgaggaacgggtacaggtg 3380
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 338 cccatgaggcccttggcgaacgggtacaggtg 369 ||||||||||||||| ||||||||||||||| Sbjct: 3429 cccatgaggcccttgaggaacgggtacaggtg 3398
>gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence Length = 1402 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Minus Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || |||||||||||| ||||| ||||| || ||||||||| |||||||||| Sbjct: 724 ccccaggatgcccttggcgaaagggtagaggtggaagagcacccagaagttgaagaagac 665 Query: 397 accgcc 402 ||||| Sbjct: 664 gccgcc 659
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 286 ggcgaggaggccggaccagacgaagacgatggtcggcgtgcg 327 |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 3335 ggcgaggaggatcgaccaaacgatgacgatggtcggcgtgcg 3294
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Minus Query: 338 cccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaaga 395 |||||||| |||||| |||||||||||||||| | | ||||||||| |||||||| Sbjct: 3335 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaaga 3278 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 593 tcgatgccagcaatgaccttgaggaggccctg 624 |||||||| |||| ||||||||||||||||| Sbjct: 3086 tcgatgccggcaagcaccttgaggaggccctg 3055
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Minus Query: 338 cccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaaga 395 |||||||| |||||| |||||||||||||||| | | ||||||||| |||||||| Sbjct: 3335 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaaga 3278 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 593 tcgatgccagcaatgaccttgaggaggccctg 624 |||||||| |||| ||||||||||||||||| Sbjct: 3086 tcgatgccggcaagcaccttgaggaggccctg 3055
>gb|AY105724.1| Zea mays PCO149105 mRNA sequence Length = 1357 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Minus Query: 337 ccccatgaggcccttggcgaacgggtacaggtgagccagtacccagaagctgaagaagac 396 ||||| || |||||||||||| ||||| ||||| || ||||||||| |||||||||| Sbjct: 812 ccccaggatgcccttggcgaaagggtagaggtggaagagcacccagaagttgaagaagac 753 Query: 397 accgcc 402 ||||| Sbjct: 752 gccgcc 747
>dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100a, complete sequence Length = 79575 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 agatggtgatggcgaggaggcc 297 |||||||||||||||||||||| Sbjct: 10311 agatggtgatggcgaggaggcc 10290
>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348, complete sequence Length = 105070 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 agatggtgatggcgaggaggcc 297 |||||||||||||||||||||| Sbjct: 38928 agatggtgatggcgaggaggcc 38907
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 333 ggcgccccatgaggcccttggcgaacgggtacaggtg 369 ||||||||||||| |||||| ||||||||| ||||| Sbjct: 3113 ggcgccccatgagccccttgaggaacgggtagaggtg 3077
>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence Length = 789 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 337 ccccatgaggcccttggcgaacgggtacaggtg 369 |||||||||||||||| ||| ||||||||||| Sbjct: 335 ccccatgaggcccttgaggaaggggtacaggtg 367
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 128397 gaccagacgatgacgatggtcggagtgcg 128425
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 17240 gaccagacgatgacgatggtcggagtgcg 17268
>gb|AC068880.6| Homo sapiens chromosome 8, clone RP11-618M23, complete sequence Length = 189810 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 ccagctagctgctgctgctggaaca 163 ||||||||||||||||| ||||||| Sbjct: 79617 ccagctagctgctgctggtggaaca 79593
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 4506773 gaccagacgatgacgatggtcggagtgcg 4506801
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 337 ccccatgaggcccttggcgaacgggtacaggtg 369 |||||||||||||||| ||| ||||||||||| Sbjct: 3343 ccccatgaggcccttgaggaaggggtacaggtg 3311
>gb|AC060813.12| Homo sapiens chromosome 8, clone RP11-809N7, complete sequence Length = 144872 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 139 ccagctagctgctgctgctggaaca 163 ||||||||||||||||| ||||||| Sbjct: 117325 ccagctagctgctgctggtggaaca 117301
>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0538C01 Length = 155643 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 atgaactagtatgatccatga 58 ||||||||||||||||||||| Sbjct: 79335 atgaactagtatgatccatga 79355
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 3311 gaccagacgatgacgatggtcggagtgcg 3283
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full insert sequence Length = 1426 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 988 gaccagacgatgacgatggtcggagtgcg 960
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full insert sequence Length = 1097 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 299 gaccagacgaagacgatggtcggcgtgcg 327 |||||||||| |||||||||||| ||||| Sbjct: 562 gaccagacgatgacgatggtcggagtgcg 534
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 337 ccccatgaggcccttggcgaacgggtacaggtg 369 |||||||||||||||| ||| ||||||||||| Sbjct: 3343 ccccatgaggcccttgaggaaggggtacaggtg 3311
>emb|AL670464.12| Mouse DNA sequence from clone RP23-12I24 on chromosome 4, complete sequence Length = 203558 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 ggagcttgctccactgcggga 425 ||||||||||||||||||||| Sbjct: 95550 ggagcttgctccactgcggga 95570
>gb|AY633768.1| Sus scrofa relaxin-3/INSL7 receptor 2 (GPCR142) mRNA, complete cds Length = 1122 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 659 ccaccagctacctgctgctgctgg 682
>gb|AY633767.1| Bos taurus relaxin-3/INSL7 receptor 2 (GPCR142) mRNA, complete cds Length = 1122 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 659 ccaccagctacctgctgctgctgg 682
>gb|AY633766.1| Macaca nemestrina relaxin-3/INSL7 receptor 2 (GPCR142) mRNA, complete cds Length = 1122 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 659 ccaccagctacctgctgctgctgg 682
>ref|NM_104329.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G54510 mRNA, complete cds Length = 2207 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccagaagctgaagaagacac 398 |||||||||||||||||||| Sbjct: 1056 ccagaagctgaagaagacac 1075
>ref|NM_122214.2| Arabidopsis thaliana RNA binding AT5G23080 transcript variant AT5G23080.1 mRNA, complete cds Length = 3413 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 1568 gggaactggaaggagcctcc 1549
>ref|NM_001036849.1| Arabidopsis thaliana RNA binding AT5G23080 transcript variant AT5G23080.2 mRNA, complete cds Length = 3323 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 1478 gggaactggaaggagcctcc 1459
>ref|XM_522391.1| PREDICTED: Pan troglodytes similar to cytokeratin (LOC466991), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gaccttgaggaggccctgca 626 |||||||||||||||||||| Sbjct: 1507 gaccttgaggaggccctgca 1526
>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence Length = 1450 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 593 tcgatgccagcaatgaccttgaggaggccctg 624 |||||||| |||| ||||||||||||||||| Sbjct: 871 tcgatgccggcaagcaccttgaggaggccctg 840
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccagctagctgctgctgctg 158 |||||||||||||||||||| Sbjct: 78488 ccagctagctgctgctgctg 78507
>ref|NM_181885.1| Homo sapiens relaxin/insulin-like family peptide receptor 4 (RXFP4), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 662 ccaccagctacctgctgctgctgg 685
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccagctagctgctgctgctg 158 |||||||||||||||||||| Sbjct: 31602179 ccagctagctgctgctgctg 31602160
>gb|AY518689.1| Arabidopsis thaliana TOUGH mRNA, complete cds Length = 2703 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 1439 gggaactggaaggagcctcc 1420
>gb|AY483153.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA5) mRNA, partial cds Length = 2814 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 338 cccatgaggcccttggcgaacgggtacaggtg 369 |||||||| |||||| ||||||||||||||| Sbjct: 2492 cccatgagacccttgaggaacgggtacaggtg 2461
>gb|AY394502.1| Homo sapiens relaxin-3 receptor-2 mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 662 ccaccagctacctgctgctgctgg 685
>gb|AY288415.1| Homo sapiens G protein-coupled receptor 100 (GPR100) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 662 ccaccagctacctgctgctgctgg 685
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ccagaagctgaagaagacac 398 |||||||||||||||||||| Sbjct: 131079 ccagaagctgaagaagacac 131060
>gb|AY170824.1| Homo sapiens G protein-coupled receptor (GPR100) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 662 ccaccagctacctgctgctgctgg 685
>gb|AC034108.26| Mus musculus strain 129S6/SvEvTac clone rp22-70m05 map 1, complete sequence Length = 175231 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gctgctgctgctggaacaaa 165 |||||||||||||||||||| Sbjct: 51018 gctgctgctgctggaacaaa 51037
>gb|BC101507.1| Homo sapiens relaxin family peptide receptor 4, mRNA (cDNA clone MGC:126556 IMAGE:8069013), complete cds Length = 1236 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 682 ccaccagctacctgctgctgctgg 705
>gb|BC101509.1| Homo sapiens relaxin family peptide receptor 4, mRNA (cDNA clone MGC:126558 IMAGE:8069015), complete cds Length = 1236 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 682 ccaccagctacctgctgctgctgg 705
>emb|AL355388.30| Human DNA sequence from clone RP11-336K24 on chromosome 1 Contains the 5' end of the RIT1 gene for Ras-like without CAAX 1, the gene for a novel protein (KIAA0907), the ARHGEF2 gene for rho/rac guanine nucleotide exchange factor (GEF) 2, four novel genes, the SSR2 gene for signal sequence receptor beta (translocon-associated protein beta), the C1orf6 gene for chromosome 1 open reading frame 6, the gene for mitogen-activated protein-binding protein-interacting protein (MAPBPIP), the RAB25 gene for RAB25 (member RAS oncogene family), the 5' end of the LMNA gene for lamin A/C and three CpG islands, complete sequence Length = 205463 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 36051 ccaccagctacctgctgctgctgg 36074
>emb|AL030996.1|HS1189B24 Human DNA sequence from clone RP5-1189B24 on chromosome Xq25-26.3 Contains the 3' end of the THOC2 gene for THO complex 2, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4) pseudogene, a tubulin beta 4 (TUBB4) pseudogene and a fer (fps/fes related) tyrosine kinase (phosphoprotein NCP94) (FER) pseudogene, complete sequence Length = 114784 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 agctagctgctgctgctgga 160 |||||||||||||||||||| Sbjct: 106121 agctagctgctgctgctgga 106140
>emb|Y19212.1|HSDNAK6HF Homo sapiens K6hf gene for hair keratin, exons 1 to 9 Length = 17400 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gaccttgaggaggccctgca 626 |||||||||||||||||||| Sbjct: 10917 gaccttgaggaggccctgca 10936
>emb|Y17282.1|HOSA17282 Homo sapiens mRNA for cytokeratin type II Length = 2121 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gaccttgaggaggccctgca 626 |||||||||||||||||||| Sbjct: 1261 gaccttgaggaggccctgca 1280
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atggtgatggcgaggaggccggac 301 |||||||||||||| ||||||||| Sbjct: 2907950 atggtgatggcgagcaggccggac 2907973
>gb|BT008588.1| Arabidopsis thaliana clone U50866 unknown protein (At5g23080) mRNA, complete cds Length = 2824 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 1529 gggaactggaaggagcctcc 1510
>gb|AY127027.1| Arabidopsis thaliana At1g54510/F20D21_33 mRNA sequence Length = 2294 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 ccagaagctgaagaagacac 398 |||||||||||||||||||| Sbjct: 1142 ccagaagctgaagaagacac 1161
>dbj|AB083593.1| Homo sapiens GPCR gene for putative G-protein coupled receptor, complete CDS, clone:hGPCR11 Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 662 ccaccagctacctgctgctgctgg 685
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccagctagctgctgctgctg 158 |||||||||||||||||||| Sbjct: 31692695 ccagctagctgctgctgctg 31692676
>ref|NM_001007076.1| Bos taurus G protein-coupled receptor 100 (GPR100), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 659 ccaccagctacctgctgctgctgg 682
>ref|NM_001005844.1| Sus scrofa G protein-coupled receptor 100 (GPR100), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 659 ccaccagctacctgctgctgctgg 682
>gb|AC055736.20|AC055736 Homo sapiens 12 BAC RP11-1020M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150902 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gaccttgaggaggccctgca 626 |||||||||||||||||||| Sbjct: 135395 gaccttgaggaggccctgca 135414
>ref|XM_341389.2| PREDICTED: Rattus norvegicus retinoic acid induced 17 (predicted) (Rai17_predicted), mRNA Length = 3255 Score = 40.1 bits (20), Expect = 8.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 610 cttgaggaggccctgcancacag 632 ||||||||||||||||| ||||| Sbjct: 2145 cttgaggaggccctgcagcacag 2123
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 40.1 bits (20), Expect = 8.8 Identities = 31/35 (88%) Strand = Plus / Minus Query: 599 ccagcaatgaccttgaggaggccctgcancacagc 633 ||||| |||||||||||||| ||||| | |||||| Sbjct: 2825 ccagctatgaccttgaggagtccctggaacacagc 2791
>dbj|AK118129.1| Arabidopsis thaliana At5g23080 mRNA for unknown protein, complete cds, clone: RAFL19-42-D19 Length = 3080 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 1568 gggaactggaaggagcctcc 1549
>dbj|AB006708.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYJ24 Length = 78844 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gggaactggaaggagcctcc 228 |||||||||||||||||||| Sbjct: 35115 gggaactggaaggagcctcc 35134
>ref|NM_004693.1| Homo sapiens cytokeratin type II (K6HF), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gaccttgaggaggccctgca 626 |||||||||||||||||||| Sbjct: 1261 gaccttgaggaggccctgca 1280
>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 215602 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 atgaactagtatgatccatg 57 |||||||||||||||||||| Sbjct: 99425 atgaactagtatgatccatg 99406
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 40.1 bits (20), Expect = 8.8 Identities = 31/35 (88%) Strand = Plus / Minus Query: 599 ccagcaatgaccttgaggaggccctgcancacagc 633 ||||| |||||||||||||| ||||| | |||||| Sbjct: 3058 ccagctatgaccttgaggagtccctggaacacagc 3024
>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence Length = 170607 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ccagctagctgctgctgctg 158 |||||||||||||||||||| Sbjct: 41094 ccagctagctgctgctgctg 41075
>gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-88k7, complete sequence Length = 227773 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gctgctgctgctggaacaaa 165 |||||||||||||||||||| Sbjct: 176641 gctgctgctgctggaacaaa 176622
>gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence Length = 242808 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gctgctgctgctggaacaaa 165 |||||||||||||||||||| Sbjct: 122764 gctgctgctgctggaacaaa 122783
>gb|AC068906.14| Mus musculus strain C57BL/6J chromosome 1 clone rp23-240p23, complete sequence Length = 192366 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gctgctgctgctggaacaaa 165 |||||||||||||||||||| Sbjct: 176641 gctgctgctgctggaacaaa 176622
>gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence Length = 225646 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gctgctgctgctggaacaaa 165 |||||||||||||||||||| Sbjct: 122762 gctgctgctgctggaacaaa 122781
>dbj|AB065617.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_180 Length = 42863 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ccaccagctagctgctgctgctgg 159 |||||||||| ||||||||||||| Sbjct: 862 ccaccagctacctgctgctgctgg 885 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,162,349 Number of Sequences: 3902068 Number of extensions: 5162349 Number of successful extensions: 125116 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 124423 Number of HSP's gapped (non-prelim): 670 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
