Clone Name | rbags22j18 |
---|---|
Clone Library Name | barley_pub |
>SGPL_ARATH (Q9C509) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 544 Score = 215 bits (547), Expect = 9e-56 Identities = 99/136 (72%), Positives = 120/136 (88%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSK 412 LG GYL++T +IME SK++++G+ +I LFVIGKPDMT+VAFGS A+DIFEVNDIMSSK Sbjct: 407 LGEEGYLQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSK 466 Query: 411 GWHLNALQRPNSLHICVTLQHTAIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKM 232 GWHLNALQRPNS+HIC+TLQH + ++FL+DL ++V TVKANPGPI+GG+APIYGAAGKM Sbjct: 467 GWHLNALQRPNSIHICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYGAAGKM 526 Query: 231 PDRGTVKELLVEFMDS 184 PDRG V ELLV FMDS Sbjct: 527 PDRGMVNELLVSFMDS 542
>SGPL1_HUMAN (O95470) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (hSPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 118 bits (295), Expect = 1e-26 Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 2/137 (1%) Frame = -1 Query: 588 GLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKG 409 G NGY+E+T QI++ ++ ++ +++I G+FV G P ++V+A GS DI+ ++++M++KG Sbjct: 412 GENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKG 471 Query: 408 WHLNALQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGK 235 W+LN LQ P S+H C+TL H + +FLKD+ +SV + NP + GM IYG A Sbjct: 472 WNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQT 531 Query: 234 MPDRGTVKELLVEFMDS 184 DR V EL F+DS Sbjct: 532 TVDRNMVAELSSVFLDS 548
>SGPL1_RAT (Q8CHN6) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 116 bits (291), Expect = 4e-26 Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 2/137 (1%) Frame = -1 Query: 588 GLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKG 409 G NGY+E+T QI++ ++ ++ +++I +F++G P ++V+A GS+ DI+ ++++MS+KG Sbjct: 412 GENGYVEATKQIIKTARFLKSELENIKNIFILGDPQLSVIALGSNDFDIYRLSNMMSAKG 471 Query: 408 WHLNALQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGK 235 W+ N LQ P S+H C+TL HT + +FLKD+ +SV + NP + GM IYG A Sbjct: 472 WNFNYLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQA 531 Query: 234 MPDRGTVKELLVEFMDS 184 DR V E+ F+DS Sbjct: 532 TIDRKMVAEISSVFLDS 548
>SGPL1_MOUSE (Q8R0X7) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (mSPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 114 bits (285), Expect = 2e-25 Identities = 54/136 (39%), Positives = 88/136 (64%), Gaps = 2/136 (1%) Frame = -1 Query: 588 GLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKG 409 G NGY+E+T QI++ ++ ++ +++I +F+ G P ++V+A GS+ DI+ ++++MS+KG Sbjct: 412 GENGYVEATKQIIKTARFLKSELENIKNIFIFGDPQLSVIALGSNDFDIYRLSNMMSAKG 471 Query: 408 WHLNALQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGK 235 W+ N LQ P S+H C+TL HT + +FLKD+ +SV + NP + GM IYG A Sbjct: 472 WNFNYLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQA 531 Query: 234 MPDRGTVKELLVEFMD 187 DR V E+ F+D Sbjct: 532 TIDRKLVAEISSVFLD 547
>SGPL_DROME (Q9V7Y2) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 545 Score = 114 bits (285), Expect = 2e-25 Identities = 55/138 (39%), Positives = 90/138 (65%), Gaps = 3/138 (2%) Frame = -1 Query: 588 GLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKG 409 G +GYLE+T +I++ ++ I++G+ DI G+F+ GKP +V+A GS+ DIF ++D + G Sbjct: 401 GYDGYLEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIFRLSDSLCKLG 460 Query: 408 WHLNALQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPG-PISGGMAPIYGAAG 238 W+LNALQ P+ +H+CVT HT + ++F+ D+ + +PG P+ G MA +YG A Sbjct: 461 WNLNALQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEIMKDPGQPVVGKMA-LYGMAQ 519 Query: 237 KMPDRGTVKELLVEFMDS 184 +PDR + E+ F+ S Sbjct: 520 SIPDRSVIGEVTRLFLHS 537
>SGPL_YEAST (Q05567) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (ySPL) (Sphingosine-1-phosphate aldolase) (Bestowed of sphingosine tolerance 1) Length = 589 Score = 93.2 bits (230), Expect = 5e-19 Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 3/139 (2%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGI-DDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSS 415 +G NGY+ES +I+ + K +K I ++I L ++G P +V++F S ++I E++D +S Sbjct: 438 MGENGYIESCQEIVGAAMKFKKYIQENIPDLNIMGNPRYSVISFSSKTLNIHELSDRLSK 497 Query: 414 KGWHLNALQRPNSLHICVTLQHTAIYEEFLKDLEDSVNTVK--ANPGPISGGMAPIYGAA 241 KGWH NALQ+P +LH+ T + +E L +V +K +N P G + +YG A Sbjct: 498 KGWHFNALQKPVALHMAFTRLSAHVVDEICDILRTTVQELKSESNSKPSPDGTSALYGVA 557 Query: 240 GKMPDRGTVKELLVEFMDS 184 G + G +L+V F+D+ Sbjct: 558 GSVKTAGVADKLIVGFLDA 576
>SGPL_CAEEL (Q9Y194) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 552 Score = 79.3 bits (194), Expect = 8e-15 Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 3/139 (2%) Frame = -1 Query: 588 GLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKG 409 G + Y+ QI++ ++ + + I+ I + GK D+++VAF + V+I+EV+D M G Sbjct: 406 GRDEYVRRCAQIVKHTRMLAEKIEKIKWIKPYGKSDVSLVAFSGNGVNIYEVSDKMMKLG 465 Query: 408 WHLNALQRPNSLHICVTLQ--HTAIYEEFLKDLEDSVNTVKA-NPGPISGGMAPIYGAAG 238 W+LN LQ P ++HIC+T+ + + F DLE + A GMA +YG A Sbjct: 466 WNLNTLQNPAAIHICLTINQANEEVVNAFAVDLEKICEELAAKGEQKADSGMAAMYGMAA 525 Query: 237 KMPDRGTVKELLVEFMDSS 181 ++P + V E++ ++D++ Sbjct: 526 QVP-KSVVDEVIALYIDAT 543
>MFNA_PYRKO (Q5JJ82) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 384 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/94 (26%), Positives = 55/94 (58%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSK 412 LG +GY E + ME+++ + I G+++I +P + +V+FGS+ ++ E+ + ++ Sbjct: 289 LGFDGYKEVVKEKMELARWFASELKKIPGIYLIREPVLNIVSFGSEKLE--ELEKELKAR 346 Query: 411 GWHLNALQRPNSLHICVTLQHTAIYEEFLKDLED 310 GW ++A + + + ++ + EEFL+DL + Sbjct: 347 GWGVSAHRGYIRIVVMPHVKREHL-EEFLRDLRE 379
>MFNA_METTH (O27188) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 363 Score = 40.0 bits (92), Expect = 0.005 Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 4/97 (4%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSK 412 +G GY + ++M V+++++ G+ ++ V+ +P++ +VAF A+ E+ D + Sbjct: 264 MGREGYRKLALRVMGVTRRLRDGLVELDYQLVV-EPELNIVAFNHPAMGPHELADRLEEL 322 Query: 411 GWHLNALQRPNSLHICVTLQHTAIYEE----FLKDLE 313 GW ++ P ++ + V + H I EE L+DLE Sbjct: 323 GWAVSVSSCPPAIRV-VLMPH--IMEEHIELLLRDLE 356
>DCE_LYCES (P54767) Glutamate decarboxylase (EC 4.1.1.15) (GAD) (ERT D1)| Length = 502 Score = 30.8 bits (68), Expect = 3.1 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 5/99 (5%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKP-DMTVVAFG---SDAVDIFEVNDI 424 LG GY + +K + +GI + ++ K + VVAF S +FEV++ Sbjct: 336 LGFEGYKNVMKNCLSNAKVLTEGITKMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEH 395 Query: 423 MSSKGWHLNA-LQRPNSLHICVTLQHTAIYEEFLKDLED 310 + GW + A P++ HI V I E+F L + Sbjct: 396 LRRFGWIVPAYTMPPDAEHIAVL--RVVIREDFSHSLAE 432
>DCE1_ARATH (Q42521) Glutamate decarboxylase 1 (EC 4.1.1.15) (GAD 1)| Length = 502 Score = 30.8 bits (68), Expect = 3.1 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 5/99 (5%) Frame = -1 Query: 591 LGLNGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPD-MTVVAFG---SDAVDIFEVNDI 424 LG GY E +++G++ ++ K + + +VAF S FE++D+ Sbjct: 335 LGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDM 394 Query: 423 MSSKGWHLNA-LQRPNSLHICVTLQHTAIYEEFLKDLED 310 + GW + A PN+ HI T+ I E+F + L + Sbjct: 395 LRRYGWIVPAYTMPPNAQHI--TVLRVVIREDFSRTLAE 431
>SMG1_CAEBR (Q61CW2) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)| (Suppressor with morphogenetic effect on genitalia protein 1) Length = 2319 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Frame = +1 Query: 187 VHELYK*LLDRASIRHLPSRPVDRSHPPADRP------WIRFHGVYRILEILEEFLVN 342 + L K +++R S P + PPA P W+R H + +++E+LE+ +++ Sbjct: 776 IKRLAKEVINRKSSDKKPKSTTEDVPPPATPPLKFSIQWLRVHLLLKLIEVLEKIMIS 833
>Y087_DEIRA (Q9RY63) UPF0168 protein DR0087| Length = 157 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +1 Query: 265 PPADRPWIRFHGVYRILEILEEFLVNCRVLKCHAD 369 P D +IRF VYR + LE F+ R LK H D Sbjct: 115 PLDDVAYIRFASVYRDFDSLERFIEEIRGLKGHED 149
>SYFB_BACSK (Q5WEJ6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 808 Score = 29.6 bits (65), Expect = 6.8 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Frame = -1 Query: 582 NGYLESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWH 403 NG + S ++ SK + KG D G++V P+ V G DA+ IFE+ND + Sbjct: 117 NGMICSLQELGIDSKLVPKGYVD--GIYVF--PETQSVEPGQDALAIFELNDSVLELDLT 172 Query: 402 LNALQRPNSLHIC-VTLQHTAIYEEFLKDLEDSVNTV 295 N R + +H+ V + A+Y+ +K + V V Sbjct: 173 PN---RSDCMHMLGVAYELAALYDRPIKMPKTKVKEV 206
>IFRD2_HUMAN (Q12894) Interferon-related developmental regulator 2 (SKMC15| protein) Length = 442 Score = 29.3 bits (64), Expect = 8.9 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 411 LLMTLCHSPQICRPRPTQRPRQSCLVSQSQINLR 512 LL+T+C S QI Q PR L+S +NLR Sbjct: 244 LLLTICPSTQISHILDRQLPRLPQLLSSESVNLR 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,135,241 Number of Sequences: 219361 Number of extensions: 1872895 Number of successful extensions: 4953 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4803 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4946 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)