Clone Name	rbags28o23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ201161.1| Hordeum vulgare subsp. vulgare cultivar Morex phy...	1350	0.0
2	gb|AF406643.1|AF406643 Hordeum vulgare phytochrome C mRNA, parti...	1342	0.0
3	gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochr...	854	0.0
4	gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ...	502	e-139
5	gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	494	e-136
6	gb|AY673002.1|AY673001S2 Triticum aestivum cultivar Chinese Spri...	480	e-132
7	gb|AY673000.1| Triticum aestivum cultivar Soleil phytochrome C (...	480	e-132
8	gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LT...	464	e-127
9	gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MIT...	464	e-127
10	gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, c...	464	e-127
11	gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist...	464	e-127
12	gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tou...	464	e-127
13	emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytoch...	464	e-127
14	gb|AY672999.1| Triticum aestivum cultivar Soleil phytochrome C (...	456	e-125
15	gb|AY244514.1| Triticum monococcum cultivar G1777 phytochrome C ...	452	e-124
16	ref|XM_469781.1| Oryza sativa (japonica cultivar-group), mRNA	424	e-115
17	dbj|AB018442.1| Oryza sativa (japonica cultivar-group) mRNA for ...	424	e-115
18	dbj|AK060467.1| Oryza sativa (japonica cultivar-group) cDNA clon...	416	e-113
19	gb|DQ201160.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	400	e-108
20	gb|U56731.1|SBU56731 Sorghum bicolor phytochrome C (PHYC) mRNA, ...	389	e-105
21	gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC...	272	1e-69
22	gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	264	3e-67
23	gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, c...	234	3e-58
24	gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p...	230	5e-57
25	gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome...	226	8e-56
26	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	226	8e-56
27	gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom...	226	8e-56
28	gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ...	226	8e-56
29	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	226	8e-56
30	gb|AY466452.1| Sorghum propinquum phytochrome C (PHYC) gene, com...	216	7e-53
31	gb|AY466468.1| Sorghum x drummondii voucher PI199869 phytochrome...	216	7e-53
32	gb|AY466467.1| Sorghum arundinaceum voucher PI302233 phytochrome...	216	7e-53
33	gb|AY466466.1| Sorghum arundinaceum voucher PI225905 phytochrome...	216	7e-53
34	gb|AY466465.1| Sorghum arundinaceum voucher IS14485 phytochrome ...	216	7e-53
35	gb|AY466464.1| Sorghum arundinaceum voucher PI302105 phytochrome...	216	7e-53
36	gb|AY466463.1| Sorghum arundinaceum voucher IS14567 phytochrome ...	216	7e-53
37	gb|AY466462.1| Sorghum arundinaceum voucher IS14503 phytochrome ...	216	7e-53
38	gb|AY466461.1| Sorghum arundinaceum voucher PI213900 phytochrome...	216	7e-53
39	gb|AY466460.1| Sorghum arundinaceum voucher IS14569 phytochrome ...	216	7e-53
40	gb|AY466459.1| Sorghum bicolor phytochrome C (PHYC) gene, comple...	216	7e-53
41	gb|AY466458.1| Sorghum bicolor phytochrome C (PHYC) gene, comple...	216	7e-53
42	gb|AY466457.1| Sorghum bicolor voucher NSL83707 phytochrome C (P...	216	7e-53
43	gb|AY466456.1| Sorghum bicolor voucher PI152593 phytochrome C (P...	216	7e-53
44	gb|AY466455.1| Sorghum bicolor voucher PI229835 phytochrome C (P...	216	7e-53
45	gb|AY466454.1| Sorghum bicolor voucher PI153800 phytochrome C (P...	216	7e-53
46	gb|AY466453.1| Sorghum bicolor voucher PI267380 phytochrome C (P...	216	7e-53
47	gb|AY234829.1| Zea mays cultivar B73 phytochrome C1 apoprotein (...	210	4e-51
48	gb|AY108852.1| Zea mays PCO066683 mRNA sequence	210	4e-51
49	gb|AY234830.1| Zea mays cultivar B73 phytochrome C2 apoprotein (...	178	2e-41
50	gb|AY190015.1| Stellaria longipes PHYA4 photoreceptor (PHYA4) mR...	46	0.15
51	gb|AY190013.1| Stellaria longipes PHYA2 photoreceptor (PHYA2) mR...	46	0.15
52	gb|AF544027.1| Stellaria longipes ecotype prairie phytochrome A1...	46	0.15
53	gb|AY394847.1| Arabidopsis thaliana ecotype Kas-1 phytochrome c ...	44	0.60
54	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
55	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
56	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
57	dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
58	dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
59	dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
60	dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
61	dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic D...	44	0.60
62	emb|Z32538.1|ATPHYCG A.thaliana phyC gene	44	0.60
63	gb|BT019007.1| Zea mays clone Contig497.F mRNA sequence	42	2.4
64	emb|AL354920.21| Human DNA sequence from clone RP11-522I20 on ch...	42	2.4
65	emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2	42	2.4
66	gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, comp...	42	2.4
67	ref|NM_127191.2| Arabidopsis thaliana THY-1 (THYMIDYLATE SYNTHAS...	40	9.4
68	ref|NM_122975.2| Arabidopsis thaliana PHYC (PHYTOCHROME DEFECTIV...	40	9.4
69	gb|AE000662.1|HUAE000662 Homo sapiens T-cell receptor alpha delt...	40	9.4
70	gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, com...	40	9.4
71	gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Can...	40	9.4
72	gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome...	40	9.4
73	gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosom...	40	9.4
74	gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome...	40	9.4
75	gb|AF022968.1| Caenorhabditis elegans cosmid C10F3, complete seq...	40	9.4
76	gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, compl...	40	9.4
77	gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, co...	40	9.4
78	gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, com...	40	9.4
79	gb|AY114032.1| Arabidopsis thaliana putative dihydrofolate reduc...	40	9.4
80	gb|AY063968.1| Arabidopsis thaliana putative dihydrofolate reduc...	40	9.4
81	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	40	9.4
82	emb|CR543861.1| Acinetobacter sp. ADP1 complete genome	40	9.4
83	gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosom...	40	9.4
84	gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, co...	40	9.4
85	gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 ma...	40	9.4
86	gb|AY065040.1| Arabidopsis thaliana AT5g35840/MIK22_15 mRNA sequ...	40	9.4
87	gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-...	40	9.4
88	emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in l...	40	9.4
89	emb|BX820156.1|CNS0A82Z Arabidopsis thaliana Full-length cDNA Co...	40	9.4
90	gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I...	40	9.4
91	gb|AC138570.1| Zea mays genomic clone ZM16H10, finished contig 3...	40	9.4
92	gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete...	40	9.4
93	gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c...	40	9.4
94	dbj|AB005236.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	9.4
95	emb|X17343.1|ATPHYC Arabidopsis thaliana phyC mRNA for phytochrome	40	9.4
96	gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, compl...	40	9.4
97	gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, comple...	40	9.4
98	gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, compl...	40	9.4
99	emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on ch...	40	9.4
100	emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chr...	40	9.4
101	emb|CR550305.7| Zebrafish DNA sequence from clone DKEY-205E15 in...	40	9.4
102	gb|AC133947.3| Mus musculus BAC clone RP24-189I2 from 9, complet...	40	9.4
103	ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ...	40	9.4
104	emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chr...	40	9.4
105	gb|L08593.1|ATHDRTHYX Arabidopsis thaliana dihydrofolate reducta...	40	9.4

---

>gb|DQ201161.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome C mRNA,
            partial cds
          Length = 1116

 Score = 1350 bits (681), Expect = 0.0
 Identities = 684/685 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 949

                                                                        
Query: 61   ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 889

                                                                        
Query: 121  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 829

                                                                        
Query: 181  ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828  ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 769

                                                                        
Query: 241  gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 709

                                                                        
Query: 301  accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708  accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 649

                                                                        
Query: 361  gatacccctgggccgtggcggaacatctcctgtatcagcgcctccgggacgcctggcgct 420
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648  gatacccctgggccgtgacggaacatctcctgtatcagcgcctccgggacgcctggcgct 589

                                                                        
Query: 421  gggtggacaactctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588  gggtggacaactctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttc 529

                                                                        
Query: 481  ttgggaatgacctggagtacaataggcccttcagctggccgagtaaattgaagtgtgcat 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  ttgggaatgacctggagtacaataggcccttcagctggccgagtaaattgaagtgtgcat 469

                                                                        
Query: 541  gccaagtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgat 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468  gccaagtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgat 409

                                                                        
Query: 601  gatacttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408  gatacttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatg 349

                                     
Query: 661  ccttgcattaggaccgtattcaaag 685
            |||||||||||||||||||||||||
Sbjct: 348  ccttgcattaggaccgtattcaaag 324

---

>gb|AF406643.1|AF406643 Hordeum vulgare phytochrome C mRNA, partial cds
          Length = 2728

 Score = 1342 bits (677), Expect = 0.0
 Identities = 683/685 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 2598

                                                                        
Query: 61   ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 2538

                                                                        
Query: 121  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 2478

                                                                        
Query: 181  ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 2418

                                                                        
Query: 241  gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 2358

                                                                        
Query: 301  accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 2298

                                                                        
Query: 361  gatacccctgggccgtggcggaacatctcctgtatcagcgcctccgggacgcctggcgct 420
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 gatacccctgggccgtgacggaacatctcctgtatcagcgcctccgggacgcctggcgct 2238

                                                                        
Query: 421  gggtggacaactctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttc 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 gggtggacaactctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttc 2178

                                                                        
Query: 481  ttgggaatgacctggagtacaataggcccttcagctggccgagtaaattgaagtgtgcat 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 ttgggaatgacctggagtacaataggcccttcagctggccgagtaaattgaagtgtgcat 2118

                                                                        
Query: 541  gccaagtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgat 600
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2117 gccaagtagtctgctaggacttgctgaagccttaagtcatccccatataggtacattgat 2058

                                                                        
Query: 601  gatacttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 gatacttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatg 1998

                                     
Query: 661  ccttgcattaggaccgtattcaaag 685
            |||||||||||||||||||||||||
Sbjct: 1997 ccttgcattaggaccgtattcaaag 1973

---

>gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochrome C (PhyC) gene,
            complete cds
          Length = 4938

 Score =  854 bits (431), Expect = 0.0
 Identities = 434/435 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4676 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 4617

                                                                        
Query: 61   ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4616 ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 4557

                                                                        
Query: 121  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4556 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 4497

                                                                        
Query: 181  ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4496 ctcgtcgaaggcttcgaccacttgctcgtcgaaggcttcgacctcttgctgttgagctgt 4437

                                                                        
Query: 241  gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4436 gccaccgggaactccaccagaacgatgaacgaggagctctctgcttcccggaggtactgt 4377

                                                                        
Query: 301  accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4376 accgtgccgctcatcgtcttcacgagcttctggcttatgtgcaggccgaggccttctcgg 4317

                                                                        
Query: 361  gatacccctgggccgtggcggaacatctcctgtatcagcgcctccgggacgcctggcgct 420
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4316 gatacccctgggccgtgacggaacatctcctgtatcagcgcctccgggacgcctggcgct 4257

                           
Query: 421  gggtggacaactctg 435
            |||||||||||||||
Sbjct: 4256 gggtggacaactctg 4242



 Score =  502 bits (253), Expect = e-139
 Identities = 253/253 (100%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 3758

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 3698

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 3638

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 3578

                         
Query: 673  accgtattcaaag 685
            |||||||||||||
Sbjct: 3577 accgtattcaaag 3565

---

>gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome C
            (PhyC) gene, complete cds
          Length = 4914

 Score =  502 bits (253), Expect = e-139
 Identities = 253/253 (100%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 3758

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 3698

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 3638

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 3578

                         
Query: 673  accgtattcaaag 685
            |||||||||||||
Sbjct: 3577 accgtattcaaag 3565



 Score =  466 bits (235), Expect = e-128
 Identities = 235/235 (100%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4476 cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 4417

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4416 aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 4357

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4356 cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 4297

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 4242



 Score =  400 bits (202), Expect = e-108
 Identities = 205/206 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4652 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 4593

                                                                        
Query: 61   ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4592 ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 4533

                                                                        
Query: 121  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4532 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 4473

                                      
Query: 181  ctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||||||||| ||||||
Sbjct: 4472 ctcgtcgaaggcttcgacctcttgct 4447

---

>gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC)
            gene, complete cds
          Length = 4914

 Score =  494 bits (249), Expect = e-136
 Identities = 252/253 (99%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3817 ctgaattctagatgagcaatccgcatgccagaaccaatgtgttccttcttgggaatgacc 3758

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3757 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 3698

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3697 gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 3638

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3637 ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 3578

                         
Query: 673  accgtattcaaag 685
            |||||||||||||
Sbjct: 3577 accgtattcaaag 3565



 Score =  466 bits (235), Expect = e-128
 Identities = 235/235 (100%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4476 cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 4417

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4416 aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 4357

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4356 cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 4297

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 4242



 Score =  400 bits (202), Expect = e-108
 Identities = 205/206 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4652 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 4593

                                                                        
Query: 61   ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4592 ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 4533

                                                                        
Query: 121  cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4532 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 4473

                                      
Query: 181  ctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||||||||| ||||||
Sbjct: 4472 ctcgtcgaaggcttcgacctcttgct 4447

---

>gb|AY673002.1|AY673001S2 Triticum aestivum cultivar Chinese Spring phytochrome C (PhyC-5D)
            gene, complete cds
          Length = 6658

 Score =  480 bits (242), Expect = e-132
 Identities = 248/250 (99%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4579 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4520

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4519 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 4460

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4459 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4400

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4399 ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 4340

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4339 accgtattca 4330



 Score =  355 bits (179), Expect = 1e-94
 Identities = 221/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5166 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5107

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 5106 aacgatgaacgacgagctctccgcttctcggaggtactgcaccgtgccgctcatcgtctt 5047

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5046 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtgccg 4987

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 4986 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 4932



 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/122 (90%), Gaps = 6/122 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgc-gtattaaaattacactaaaaacctaaca---gctcagctagctaa 56
            ||||| |||||||| || |||||||||||||||||||||||||   ||| ||||||||||
Sbjct: 5385 actcgtagagttgccgtgttaaaattacactaaaaacctaacaacagctaagctagctaa 5326

                                                                        
Query: 57   --gctcctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatac 114
              |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||
Sbjct: 5325 aagctcctcctcaaccatcaaggtgggaacaacccatgttcccagctacacatatgatac 5266

              
Query: 115  at 116
            ||
Sbjct: 5265 at 5264



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5182 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5137

---

>gb|AY673000.1| Triticum aestivum cultivar Soleil phytochrome C (PhyC-5D) gene,
            complete cds
          Length = 5600

 Score =  480 bits (242), Expect = e-132
 Identities = 248/250 (99%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4908 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4849

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4848 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 4789

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4788 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4729

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 4669

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4668 accgtattca 4659



 Score =  355 bits (179), Expect = 1e-94
 Identities = 221/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5495 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5436

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 5435 aacgatgaacgacgagctctccgcttctcggaggtactgcaccgtgccgctcatcgtctt 5376

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5375 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtgccg 5316

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5315 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5261



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5511 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5466

---

>gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LTR retroelement and
            Tourist MITE, complete sequence; and phytochrome C
            (PhyC-5A) gene, complete cds
          Length = 9533

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8908 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 8849

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 8848 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 8789

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 8788 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 8729

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 8728 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 8669

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 8668 accgtattca 8659



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 9486 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 9427

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 9426 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 9367

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9366 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 9307

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 9306 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 9252



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 9502 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 9457

---

>gb|AY672997.1| Triticum aestivum cultivar Saitama 27 Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5515

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4839

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4838 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 4779

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4778 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4719

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4718 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 4659

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4658 accgtattca 4649



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5476 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5417

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5416 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 5357

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5356 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 5297

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5296 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5242



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5492 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5447

---

>gb|AY672996.1| Triticum aestivum cultivar Reward Tourist MITE, complete sequence;
            and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5516

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4839

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4838 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 4779

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4778 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4719

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4718 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 4659

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4658 accgtattca 4649



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5476 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5417

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5416 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 5357

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5356 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 5297

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5296 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5242



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5492 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5447

---

>gb|AY672995.1| Triticum aestivum cultivar Chinese Spring Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5582

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4839

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4838 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 4779

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4778 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4719

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4718 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 4659

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4658 accgtattca 4649



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5476 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5417

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5416 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 5357

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5356 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 5297

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5296 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5242



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5492 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5447

---

>gb|AY672994.1| Triticum aestivum subsp. spelta cultivar Grey Tourist MITE, complete
            sequence; and phytochrome C (PhyC-5A) gene, complete cds
          Length = 5570

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4952 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4893

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4892 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 4833

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 4832 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 4773

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4772 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 4713

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4712 accgtattca 4703



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5530 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5471

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5470 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 5411

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5410 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 5351

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5350 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5296



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5546 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5501

---

>emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytochrome C, exons 1-4
          Length = 7219

 Score =  464 bits (234), Expect = e-127
 Identities = 246/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5743 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 5684

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5683 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 5624

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 5623 gctaggacttgctgaagccttaagttatccccatataagtacattgatgatacttctaca 5564

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5563 ggccaatcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattagg 5504

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 5503 accgtattca 5494



 Score =  371 bits (187), Expect = 2e-99
 Identities = 223/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 6321 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 6262

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 6261 aacgatgaacgacgagctctccgcttctcggaggtactgtaccgtgccgctcatcgtctt 6202

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6201 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 6142

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 6141 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 6087



 Score =  141 bits (71), Expect = 3e-30
 Identities = 111/121 (91%), Gaps = 5/121 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    actcgaagagttgc-gtattaaaattacactaaaaacctaaca---gctcagctagctaa 56
            ||||| |||||||| || |||||||||||||||||||||||||   ||| ||||||||||
Sbjct: 6540 actcgtagagttgccgtgttaaaattacactaaaaacctaacaacagctaagctagctaa 6481

                                                                        
Query: 57   gctcctcctcaaccatcaac-atgggaacaatccatgttcccagctacacatatgataca 115
            |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||
Sbjct: 6480 gctcctcctcaaccatcaaagatgggaacaacccatgttcccagctacacatatgataca 6421

             
Query: 116  t 116
            |
Sbjct: 6420 t 6420



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 6337 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 6292

---

>gb|AY672999.1| Triticum aestivum cultivar Soleil phytochrome C (PhyC-5B) gene,
            complete cds
          Length = 5525

 Score =  456 bits (230), Expect = e-125
 Identities = 245/250 (98%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 4766

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4765 tggagtacaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtct 4706

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| 
Sbjct: 4705 gctaggacttgctgaagccttaagttatccccatataagtaaattgatgatacttctaca 4646

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4645 ggccaatcacgatcaagagaaatttgtttttctttgctcagagacatgccttgcattagg 4586

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 4585 accgtattca 4576



 Score =  355 bits (179), Expect = 1e-94
 Identities = 221/235 (94%)
 Strand = Plus / Minus

                                                                        
Query: 201  cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
            |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 5420 cttgctcgtcgaaggcctggacctcttgctattgagctgcgccaccgggaactctaccag 5361

                                                                        
Query: 261  aacgatgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtctt 320
            |||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 5360 aacgatgaacgacgagctctccgcttctcggaggtactgcaccgtgccgctcatcgtctt 5301

                                                                        
Query: 321  cacgagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcg 380
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5300 caccagcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtgccg 5241

                                                                   
Query: 381  gaacatctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctg 435
            |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 5240 gaacatctcctgtatcagtgcctccgggacgcctggtgctgggtggacaagtctg 5186



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 161  ggattcagaagttgctcttgctcgtcgaaggcttcgaccacttgct 206
            ||||||||||||| |||||||||||||||||| | |||| ||||||
Sbjct: 5436 ggattcagaagttactcttgctcgtcgaaggcctggacctcttgct 5391

---

>gb|AY244514.1| Triticum monococcum cultivar G1777 phytochrome C (PHYC) gene,
           partial cds
          Length = 746

 Score =  452 bits (228), Expect = e-124
 Identities = 240/244 (98%)
 Strand = Plus / Minus

                                                                       
Query: 439 tctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagt 498
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagt 687

                                                                       
Query: 499 acaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctagg 558
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 686 acaataggcccttcagctggccgagtaaattgaagcgtgcatgccaagtagtctgctagg 627

                                                                       
Query: 559 acttgctgaagccttaagttatccccatataggtacattgatgatacttctactggccaa 618
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 626 acttgctgaagccttaagttatccccatataagtacattgatgatacttctacaggccaa 567

                                                                       
Query: 619 tcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgta 678
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 566 tcacgatcaagagaaatttgtttttccttgctcacagacatgccttgcattaggaccgta 507

               
Query: 679 ttca 682
           ||||
Sbjct: 506 ttca 503

---

>ref|XM_469781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3681

 Score =  424 bits (214), Expect = e-115
 Identities = 400/462 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
            |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 3388 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 3329

                                                                        
Query: 281  ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
            ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3328 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 3269

                                                                        
Query: 341  gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
              ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 3268 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 3209

                                                                        
Query: 401  cctccgggacgcctggcgctgggtggacaactctgaattctagatgagcaatctgcatgc 460
            |||| || ||||| || ||||| |||||||  ||||| |||||||||||||||||||| |
Sbjct: 3208 cctctggaacgcccggagctggatggacaagcctgaactctagatgagcaatctgcattc 3149

                                                                        
Query: 461  cagaaccaatgtgttccttcttgggaatgacctggagtacaataggcccttcagctggcc 520
            |||| ||||| | |||| || |||| ||||| ||||| ||||||||||||||||||||| 
Sbjct: 3148 cagatccaatattttccatcctggggatgacttggagcacaataggcccttcagctggct 3089

                                                                        
Query: 521  gagtaaattgaagtgtgcatgccaagtagtctgctaggacttgctgaagccttaagttat 580
            | |||||||||||  ||||||||| | |||||||||||||||| ||||||||||| || |
Sbjct: 3088 gtgtaaattgaagcatgcatgccaggaagtctgctaggacttgttgaagccttaaattgt 3029

                                                                        
Query: 581  ccccatataggtacattgatgatacttctactggccaatcacgatcaagagaaatttgtt 640
            ||||  | |||| |||  ||||||||||| | ||||||||||| ||||  ||||||||||
Sbjct: 3028 ccccgcagaggtgcatacatgatacttctgcaggccaatcacggtcaatggaaatttgtt 2969

                                                      
Query: 641  tttccttgctcagagacatgccttgcattaggaccgtattca 682
            | ||||||||| | | |||| ||||||||||||| |||||||
Sbjct: 2968 tctccttgctctggggcatggcttgcattaggactgtattca 2927

---

>dbj|AB018442.1| Oryza sativa (japonica cultivar-group) mRNA for phytochrome C,
            complete cds
          Length = 3980

 Score =  424 bits (214), Expect = e-115
 Identities = 400/462 (86%)
 Strand = Plus / Minus

                                                                        
Query: 221  acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
            |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 3687 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 3628

                                                                        
Query: 281  ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
            ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3627 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 3568

                                                                        
Query: 341  gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
              ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 3567 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 3508

                                                                        
Query: 401  cctccgggacgcctggcgctgggtggacaactctgaattctagatgagcaatctgcatgc 460
            |||| || ||||| || ||||| |||||||  ||||| |||||||||||||||||||| |
Sbjct: 3507 cctctggaacgcccggagctggatggacaagcctgaactctagatgagcaatctgcattc 3448

                                                                        
Query: 461  cagaaccaatgtgttccttcttgggaatgacctggagtacaataggcccttcagctggcc 520
            |||| ||||| | |||| || |||| ||||| ||||| ||||||||||||||||||||| 
Sbjct: 3447 cagatccaatattttccatcctggggatgacttggagcacaataggcccttcagctggct 3388

                                                                        
Query: 521  gagtaaattgaagtgtgcatgccaagtagtctgctaggacttgctgaagccttaagttat 580
            | |||||||||||  ||||||||| | |||||||||||||||| ||||||||||| || |
Sbjct: 3387 gtgtaaattgaagcatgcatgccaggaagtctgctaggacttgttgaagccttaaattgt 3328

                                                                        
Query: 581  ccccatataggtacattgatgatacttctactggccaatcacgatcaagagaaatttgtt 640
            ||||  | |||| |||  ||||||||||| | ||||||||||| ||||  ||||||||||
Sbjct: 3327 ccccgcagaggtgcatacatgatacttctgcaggccaatcacggtcaatggaaatttgtt 3268

                                                      
Query: 641  tttccttgctcagagacatgccttgcattaggaccgtattca 682
            | ||||||||| | | |||| ||||||||||||| |||||||
Sbjct: 3267 tctccttgctctggggcatggcttgcattaggactgtattca 3226

---

>dbj|AK060467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-D07, full
           insert sequence
          Length = 1050

 Score =  416 bits (210), Expect = e-113
 Identities = 399/462 (86%)
 Strand = Plus / Minus

                                                                       
Query: 221 acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
           |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 734 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 675

                                                                       
Query: 281 ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
           ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 674 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcatgagcttctggcttatgt 615

                                                                       
Query: 341 gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
             ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 614 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 555

                                                                       
Query: 401 cctccgggacgcctggcgctgggtggacaactctgaattctagatgagcaatctgcatgc 460
           |||| || ||||| || ||||| |||||||  ||||| |||||||||||||||||||| |
Sbjct: 554 cctctggaacgcccggagctggatggacaagcctgaactctagatgagcaatctgcattc 495

                                                                       
Query: 461 cagaaccaatgtgttccttcttgggaatgacctggagtacaataggcccttcagctggcc 520
           |||| ||||| | |||| || |||| ||||| ||||| ||||||||||||||||||||| 
Sbjct: 494 cagatccaatattttccatcctggggatgacttggagcacaataggcccttcagctggct 435

                                                                       
Query: 521 gagtaaattgaagtgtgcatgccaagtagtctgctaggacttgctgaagccttaagttat 580
           | |||||||||||  ||||||||| | |||||||||||||||| ||||||||||| || |
Sbjct: 434 gtgtaaattgaagcatgcatgccaggaagtctgctaggacttgttgaagccttaaattgt 375

                                                                       
Query: 581 ccccatataggtacattgatgatacttctactggccaatcacgatcaagagaaatttgtt 640
           ||||  | |||| |||  ||||||||||| | ||||||||||| ||||  ||||||||||
Sbjct: 374 ccccgcagaggtgcatacatgatacttctgcaggccaatcacggtcaatggaaatttgtt 315

                                                     
Query: 641 tttccttgctcagagacatgccttgcattaggaccgtattca 682
           | ||||||||| | | |||| ||||||||||||| |||||||
Sbjct: 314 tctccttgctctggggcatggcttgcattaggactgtattca 273

---

>gb|DQ201160.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C mRNA,
           partial cds
          Length = 370

 Score =  400 bits (202), Expect = e-108
 Identities = 205/206 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actcgaagagttgcgtattaaaattacactaaaaacctaacagctcagctagctaagctc 221

                                                                       
Query: 61  ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ctcctcaaccatcaacatgggaacaatccatgttcccagctacacatatgatacatacat 161

                                                                       
Query: 121 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cagctaagctcttctagcaacccaaccaatgaccctggttggattcagaagttgctcttg 101

                                     
Query: 181 ctcgtcgaaggcttcgaccacttgct 206
           ||||||||||||||||||| ||||||
Sbjct: 100 ctcgtcgaaggcttcgacctcttgct 75



 Score =  206 bits (104), Expect = 7e-50
 Identities = 104/104 (100%)
 Strand = Plus / Minus

                                                                       
Query: 201 cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cttgctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccag 45

                                                       
Query: 261 aacgatgaacgaggagctctctgcttcccggaggtactgtaccg 304
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  aacgatgaacgaggagctctctgcttcccggaggtactgtaccg 1

---

>gb|U56731.1|SBU56731 Sorghum bicolor phytochrome C (PHYC) mRNA, complete cds
          Length = 3755

 Score =  389 bits (196), Expect = e-105
 Identities = 406/476 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 3700 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 3641

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 3640 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 3581

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 3580 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 3521

                                                                        
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaactctgaattctaga 444
            |||||||||||||| ||||| ||||||||||| ||||| |||||||  ||||| || | |
Sbjct: 3520 atctcctgtatcagggcctcggggacgcctggagctggatggacaatcctgaactccaaa 3461

                                                                        
Query: 445  tgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaata 504
            |||||||||||||||||||| ||||||| |||||||||||||||||||||||| || |||
Sbjct: 3460 tgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgata 3401

                                                                        
Query: 505  ggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttgc 564
            || |||||||||||  | || |||||||| | ||||||||  |||||||||||||| |||
Sbjct: 3400 ggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctgc 3341

                                                                        
Query: 565  tgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacga 624
            ||||||||||| || ||||| || ||||||||   ||||| ||| || ||||||||||| 
Sbjct: 3340 tgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacgt 3281

                                                                    
Query: 625  tcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
            |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3280 tcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3225

---

>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  272 bits (137), Expect = 1e-69
 Identities = 140/141 (99%)
 Strand = Plus / Minus

                                                                         
Query: 545   agtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgatgata 604
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73869 agtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgatgata 73810

                                                                         
Query: 605   cttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgcctt 664
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 73809 cttctactggccaatcacaatcaagagaaatttgtttttccttgctcagagacatgcctt 73750

                                  
Query: 665   gcattaggaccgtattcaaag 685
             |||||||||||||||||||||
Sbjct: 73749 gcattaggaccgtattcaaag 73729



 Score =  230 bits (116), Expect = 5e-57
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                         
Query: 433   ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91008 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 90949

                                                                     
Query: 493   tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagta 548
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90948 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagta 90893

---

>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC
           1a) pseudogene, complete sequence
          Length = 1112

 Score =  264 bits (133), Expect = 3e-67
 Identities = 139/141 (98%)
 Strand = Plus / Minus

                                                                       
Query: 545 agtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgatgata 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 820 agtagtctgctaggacttgctgaagccttaagttatccccatataggtacattgatgatg 761

                                                                       
Query: 605 cttctactggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgcctt 664
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cttctactggccaatcacaatcaagagaaatttgtttttccttgctcagagacatgcctt 701

                                
Query: 665 gcattaggaccgtattcaaag 685
           |||||||||||||||||||||
Sbjct: 700 gcattaggaccgtattcaaag 680

---

>gb|AF141942.1|AF141942 Oryza sativa phytochrome C (phyC) gene, complete cds
          Length = 6755

 Score =  234 bits (118), Expect = 3e-58
 Identities = 187/210 (89%)
 Strand = Plus / Minus

                                                                        
Query: 221  acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
            |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 5483 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 5424

                                                                        
Query: 281  ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 ctgcttcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 5364

                                                                        
Query: 341  gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
              ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 5363 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 5304

                                          
Query: 401  cctccgggacgcctggcgctgggtggacaa 430
            |||| || ||||| || ||||| |||||||
Sbjct: 5303 cctctggaacgcccggagctggatggacaa 5274



 Score =  218 bits (110), Expect = 2e-53
 Identities = 215/250 (86%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 4711 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 4652

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||| ||||||||||||||||||||| | ||||||||||| |||||||||| | |||||
Sbjct: 4651 tggagcacaataggcccttcagctggctgtgtaaattgaagcgtgcatgccaggaagtct 4592

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 4591 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 4532

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 4531 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 4472

                      
Query: 673  accgtattca 682
            || |||||||
Sbjct: 4471 actgtattca 4462

---

>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC
           1b) pseudogene, complete sequence
          Length = 1147

 Score =  230 bits (116), Expect = 5e-57
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                       
Query: 433 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 495

                                                                   
Query: 493 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagta 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagta 439

---

>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score =  226 bits (114), Expect = 8e-56
 Identities = 186/210 (88%)
 Strand = Plus / Plus

                                                                         
Query: 221   acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
             |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 86782 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 86841

                                                                         
Query: 281   ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
             ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 86842 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 86901

                                                                         
Query: 341   gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
               ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 86902 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 86961

                                           
Query: 401   cctccgggacgcctggcgctgggtggacaa 430
             |||| || ||||| || ||||| |||||||
Sbjct: 86962 cctctggaacgcccggagctggatggacaa 86991



 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433   ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
             ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 87552 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 87611

                                                                         
Query: 493   tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
             ||||| ||||||||||||||||||||| | |||||||||||  ||||||||| | |||||
Sbjct: 87612 tggagcacaataggcccttcagctggctgtgtaaattgaagcatgcatgccaggaagtct 87671

                                                                         
Query: 553   gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
             ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 87672 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 87731

                                                                         
Query: 613   ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
             ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 87732 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 87791

                       
Query: 673   accgtattca 682
             || |||||||
Sbjct: 87792 actgtattca 87801

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  226 bits (114), Expect = 8e-56
 Identities = 186/210 (88%)
 Strand = Plus / Minus

                                                                            
Query: 221      acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
                |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 30717001 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 30716942

                                                                            
Query: 281      ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
                ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 30716941 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 30716882

                                                                            
Query: 341      gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
                  ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 30716881 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 30716822

                                              
Query: 401      cctccgggacgcctggcgctgggtggacaa 430
                |||| || ||||| || ||||| |||||||
Sbjct: 30716821 cctctggaacgcccggagctggatggacaa 30716792



 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Minus

                                                                            
Query: 433      ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
                ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 30716231 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 30716172

                                                                            
Query: 493      tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
                ||||| ||||||||||||||||||||| | |||||||||||  ||||||||| | |||||
Sbjct: 30716171 tggagcacaataggcccttcagctggctgtgtaaattgaagcatgcatgccaggaagtct 30716112

                                                                            
Query: 553      gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
                ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 30716111 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 30716052

                                                                            
Query: 613      ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
                ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 30716051 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 30715992

                          
Query: 673      accgtattca 682
                || |||||||
Sbjct: 30715991 actgtattca 30715982

---

>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score =  226 bits (114), Expect = 8e-56
 Identities = 186/210 (88%)
 Strand = Plus / Plus

                                                                         
Query: 221   acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
             |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 45389 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 45448

                                                                         
Query: 281   ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
             ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 45449 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 45508

                                                                         
Query: 341   gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
               ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 45509 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 45568

                                           
Query: 401   cctccgggacgcctggcgctgggtggacaa 430
             |||| || ||||| || ||||| |||||||
Sbjct: 45569 cctctggaacgcccggagctggatggacaa 45598



 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433   ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
             ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 46159 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 46218

                                                                         
Query: 493   tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
             ||||| ||||||||||||||||||||| | |||||||||||  ||||||||| | |||||
Sbjct: 46219 tggagcacaataggcccttcagctggctgtgtaaattgaagcatgcatgccaggaagtct 46278

                                                                         
Query: 553   gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
             ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 46279 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 46338

                                                                         
Query: 613   ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
             ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 46339 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 46398

                       
Query: 673   accgtattca 682
             || |||||||
Sbjct: 46399 actgtattca 46408

---

>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score =  226 bits (114), Expect = 8e-56
 Identities = 186/210 (88%)
 Strand = Plus / Minus

                                                                         
Query: 221   acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
             |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 25702 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 25643

                                                                         
Query: 281   ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
             ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 25642 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 25583

                                                                         
Query: 341   gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
               ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 25582 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 25523

                                           
Query: 401   cctccgggacgcctggcgctgggtggacaa 430
             |||| || ||||| || ||||| |||||||
Sbjct: 25522 cctctggaacgcccggagctggatggacaa 25493



 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Minus

                                                                         
Query: 433   ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
             ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 24932 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 24873

                                                                         
Query: 493   tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
             ||||| ||||||||||||||||||||| | |||||||||||  ||||||||| | |||||
Sbjct: 24872 tggagcacaataggcccttcagctggctgtgtaaattgaagcatgcatgccaggaagtct 24813

                                                                         
Query: 553   gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
             ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 24812 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 24753

                                                                         
Query: 613   ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
             ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 24752 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 24693

                       
Query: 673   accgtattca 682
             || |||||||
Sbjct: 24692 actgtattca 24683

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  226 bits (114), Expect = 8e-56
 Identities = 186/210 (88%)
 Strand = Plus / Minus

                                                                            
Query: 221      acctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaacgaggagctct 280
                |||||||| || ||||||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 30808425 acctcttggtgctgagctgggcgaccgggaactctaccaggacgatgaacgacgagctct 30808366

                                                                            
Query: 281      ctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagcttctggcttatgt 340
                ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 30808365 ctgattcccggaggtactgaaccgtgccgctcatcgtcttcacgagcttctggcttatgt 30808306

                                                                            
Query: 341      gcaggccgaggccttctcgggatacccctgggccgtggcggaacatctcctgtatcagcg 400
                  ||||| ||||| ||||| ||| | ||||||| ||||||||||||||| |||||||| |
Sbjct: 30808305 aaaggccaaggccctctcgagatgcacctgggctgtggcggaacatctcttgtatcagag 30808246

                                              
Query: 401      cctccgggacgcctggcgctgggtggacaa 430
                |||| || ||||| || ||||| |||||||
Sbjct: 30808245 cctctggaacgcccggagctggatggacaa 30808216



 Score =  210 bits (106), Expect = 4e-51
 Identities = 214/250 (85%)
 Strand = Plus / Minus

                                                                            
Query: 433      ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
                ||||| |||||||||||||||||||| ||||| ||||| | |||| || |||| ||||| 
Sbjct: 30807655 ctgaactctagatgagcaatctgcattccagatccaatattttccatcctggggatgact 30807596

                                                                            
Query: 493      tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
                ||||| ||||||||||||||||||||| | |||||||||||  ||||||||| | |||||
Sbjct: 30807595 tggagcacaataggcccttcagctggctgtgtaaattgaagcatgcatgccaggaagtct 30807536

                                                                            
Query: 553      gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
                ||||||||||| ||||||||||| || |||||  | |||| |||  ||||||||||| | 
Sbjct: 30807535 gctaggacttgttgaagccttaaattgtccccgcagaggtgcatacatgatacttctgca 30807476

                                                                            
Query: 613      ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
                ||||||||||| ||||  ||||||||||| ||||||||| | | |||| |||||||||||
Sbjct: 30807475 ggccaatcacggtcaatggaaatttgtttctccttgctctggggcatggcttgcattagg 30807416

                          
Query: 673      accgtattca 682
                || |||||||
Sbjct: 30807415 actgtattca 30807406

---

>gb|AY466452.1| Sorghum propinquum phytochrome C (PHYC) gene, complete cds
          Length = 4424

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  ||||| |||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtccgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| ||||||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccactggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  170 bits (86), Expect = 4e-39
 Identities = 191/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| || | ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4414 ctcgtcgaaggcttggatcgcttgctgctgagctgggcgactgggaactctatcaggatg 4355

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| |  |||||||||||||||||||||||||| ||||| 
Sbjct: 4354 atgaacgatgaggtatcggcttctcttaggtactgtaccgtgccgctcatcgttttcacc 4295

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| | |||  ||| ||||||
Sbjct: 4294 agcttctggcatatgtacaggccgaggccctccctggacacctccgggttgtgccggaac 4235

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4234 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4189

---

>gb|AY466468.1| Sorghum x drummondii voucher PI199869 phytochrome C (PHYC) gene,
            complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466467.1| Sorghum arundinaceum voucher PI302233 phytochrome C (PHYC) gene,
            complete cds
          Length = 4424

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3766 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3707

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3706 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3647

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3646 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3587

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3586 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3530



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4414 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4355

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4354 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4295

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4294 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4235

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4234 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4189

---

>gb|AY466466.1| Sorghum arundinaceum voucher PI225905 phytochrome C (PHYC) gene,
            complete cds
          Length = 4427

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3769 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3710

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3709 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3650

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3649 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3590

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3589 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3533



 Score =  178 bits (90), Expect = 2e-41
 Identities = 192/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||  ||||||| || || |||||||| | ||| | |
Sbjct: 4417 ctcgtcgaaggcttggaccgcttgctactgagctgggcgactgggaactctatcaggatg 4358

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4357 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4298

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4297 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4238

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4237 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4192

---

>gb|AY466465.1| Sorghum arundinaceum voucher IS14485 phytochrome C (PHYC) gene,
            complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  178 bits (90), Expect = 2e-41
 Identities = 192/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||| ||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgacgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466464.1| Sorghum arundinaceum voucher PI302105 phytochrome C (PHYC) gene,
            complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  178 bits (90), Expect = 2e-41
 Identities = 192/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||| ||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgacgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466463.1| Sorghum arundinaceum voucher IS14567 phytochrome C (PHYC) gene,
            complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  178 bits (90), Expect = 2e-41
 Identities = 192/226 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||| ||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgacgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466462.1| Sorghum arundinaceum voucher IS14503 phytochrome C (PHYC) gene,
            complete cds
          Length = 4427

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3769 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3710

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3709 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3650

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3649 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3590

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3589 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3533



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4417 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4358

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4357 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4298

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4297 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4238

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4237 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4192

---

>gb|AY466461.1| Sorghum arundinaceum voucher PI213900 phytochrome C (PHYC) gene,
            complete cds
          Length = 4427

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3769 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3710

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3709 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3650

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3649 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3590

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3589 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3533



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4417 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4358

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4357 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4298

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4297 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4238

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4237 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4192

---

>gb|AY466460.1| Sorghum arundinaceum voucher IS14569 phytochrome C (PHYC) gene,
            complete cds
          Length = 4427

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3769 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3710

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3709 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3650

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3649 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3590

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3589 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3533



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4417 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4358

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4357 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4298

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4297 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4238

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4237 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4192

---

>gb|AY466459.1| Sorghum bicolor phytochrome C (PHYC) gene, complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466458.1| Sorghum bicolor phytochrome C (PHYC) gene, complete cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466457.1| Sorghum bicolor voucher NSL83707 phytochrome C (PHYC) gene, complete
            cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466456.1| Sorghum bicolor voucher PI152593 phytochrome C (PHYC) gene, complete
            cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466455.1| Sorghum bicolor voucher PI229835 phytochrome C (PHYC) gene, complete
            cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466454.1| Sorghum bicolor voucher PI153800 phytochrome C (PHYC) gene, complete
            cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY466453.1| Sorghum bicolor voucher PI267380 phytochrome C (PHYC) gene, complete
            cds
          Length = 4422

 Score =  216 bits (109), Expect = 7e-53
 Identities = 205/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| || ||
Sbjct: 3764 atgagcaatctgcatgccagacccaatgttttccttcttgggaatgacctggagcacgat 3705

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||||||  | || |||||||| | ||||||||  |||||||||||||| ||
Sbjct: 3704 aggtccttcagctggttgtgtgaattgaagggcgcatgccagatagtctgctaggacctg 3645

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || ||||| || ||||||||   ||||| ||| || |||||||||||
Sbjct: 3644 ctgaagccttaaattgtccccgtaaaggtacatgcgtgatatttccaccggccaatcacg 3585

                                                                     
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtatt 680
             |||| ||||||| | |||||||||| || ||  |||||||||||||||||||||||
Sbjct: 3584 ttcaatagaaattcgcttttccttgcccaaaggaatgccttgcattaggaccgtatt 3528



 Score =  186 bits (94), Expect = 6e-44
 Identities = 193/226 (85%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || || |||||||| | ||| | |
Sbjct: 4412 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgactgggaactctatcaggatg 4353

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 4352 atgaacgatgaggtatcggcttctcgtaggtactgtaccgtgccactcatcgttttcacc 4293

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||| ||||| |||||||||||| || | ||| ||| |||||  ||| ||||||
Sbjct: 4292 agcttctggcatatgtacaggccgaggccctccctggacacctctgggttgtgccggaac 4233

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| ||||||||||| ||||| |||||||
Sbjct: 4232 atctcctgtatcagggcctcggggacgcctggagctggatggacaa 4187

---

>gb|AY234829.1| Zea mays cultivar B73 phytochrome C1 apoprotein (phyC1) gene,
            complete cds
          Length = 6176

 Score =  210 bits (106), Expect = 4e-51
 Identities = 196/226 (86%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
            |||||||||||||| |||| ||||||| ||||||| || ||||||||||||| ||| | |
Sbjct: 5637 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgaccgggaactccatcaggatg 5578

                                                                        
Query: 265  atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
            |||||||| ||| | || ||||| || |||||||||||||||||||||||||| ||||| 
Sbjct: 5577 atgaacgacgaggtgtcggcttctcgaaggtactgtaccgtgccgctcatcgttttcacc 5518

                                                                        
Query: 325  agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
            |||||||||||||||| |||||||||||| || | ||| |||||||||  |||  |||||
Sbjct: 5517 agcttctggcttatgtacaggccgaggccctccctggacacccctgggttgtgctggaac 5458

                                                          
Query: 385  atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            |||||||||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 5457 atctcctgtatcagggcctctggaacgcctggagctggatggacaa 5412



 Score =  165 bits (83), Expect = 2e-37
 Identities = 200/239 (83%)
 Strand = Plus / Minus

                                                                        
Query: 444  atgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacctggagtacaat 503
            ||||||||||||||||||||| ||||||| ||||||||| |  ||||||||||| || ||
Sbjct: 4940 atgagcaatctgcatgccagatccaatgttttccttcttagacatgacctggagcacgat 4881

                                                                        
Query: 504  aggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtctgctaggacttg 563
            ||| |||||||| |   | || |||||||| | |||||| |  |||||||||||||  ||
Sbjct: 4880 aggtccttcagcagtttgtgtgaattgaagggcgcatgctagatagtctgctaggatctg 4821

                                                                        
Query: 564  ctgaagccttaagttatccccatataggtacattgatgatacttctactggccaatcacg 623
            |||||||||||| || |||||||| ||||||||  |||||||||| || ||||||| |||
Sbjct: 4820 ctgaagccttaaattgtccccataaaggtacatgcatgatacttccacaggccaattacg 4761

                                                                       
Query: 624  atcaagagaaatttgtttttccttgctcagagacatgccttgcattaggaccgtattca 682
             ||||  ||||| ||||||||||||| || ||  ||||||||||| || ||||||||||
Sbjct: 4760 ttcaattgaaatctgtttttccttgcccaaaggaatgccttgcatcagaaccgtattca 4702

---

>gb|AY108852.1| Zea mays PCO066683 mRNA sequence
          Length = 501

 Score =  210 bits (106), Expect = 4e-51
 Identities = 196/226 (86%)
 Strand = Plus / Plus

                                                                       
Query: 205 ctcgtcgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacg 264
           |||||||||||||| |||| ||||||| ||||||| || ||||||||||||| ||| | |
Sbjct: 271 ctcgtcgaaggcttggaccgcttgctgctgagctgggcgaccgggaactccatcaggatg 330

                                                                       
Query: 265 atgaacgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacg 324
           |||||||| ||| | || ||||| || |||||||||||||||||||||||||| ||||| 
Sbjct: 331 atgaacgacgaggtgtcggcttctcgaaggtactgtaccgtgccgctcatcgttttcacc 390

                                                                       
Query: 325 agcttctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaac 384
           |||||||||||||||| |||||||||||| || | ||| |||||||||  |||  |||||
Sbjct: 391 agcttctggcttatgtacaggccgaggccctccctggacacccctgggttgtgctggaac 450

                                                         
Query: 385 atctcctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
           |||||||||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 451 atctcctgtatcagggcctctggaacgcctggagctggatggacaa 496

---

>gb|AY234830.1| Zea mays cultivar B73 phytochrome C2 apoprotein (phyC2) gene,
            complete cds
          Length = 5930

 Score =  178 bits (90), Expect = 2e-41
 Identities = 210/250 (84%)
 Strand = Plus / Minus

                                                                        
Query: 433  ctgaattctagatgagcaatctgcatgccagaaccaatgtgttccttcttgggaatgacc 492
            |||||||| | ||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 4007 ctgaattccaaatgagcaatctgcatgccagacccaatgttttccttcttgggaatgacc 3948

                                                                        
Query: 493  tggagtacaataggcccttcagctggccgagtaaattgaagtgtgcatgccaagtagtct 552
            ||||| || ||| | |||||||||||  | || |||||||| | ||| ||||  || |||
Sbjct: 3947 tggagcacgatatgtccttcagctggttgtgtgaattgaagggcgcaagccagataatct 3888

                                                                        
Query: 553  gctaggacttgctgaagccttaagttatccccatataggtacattgatgatacttctact 612
            |||||||| |||||||||||||  || ||||| || | ||||||   ||| ||||| || 
Sbjct: 3887 gctaggacctgctgaagccttatattgtccccgtaaatgtacatgtgtgacacttccaca 3828

                                                                        
Query: 613  ggccaatcacgatcaagagaaatttgtttttccttgctcagagacatgccttgcattagg 672
            ||||||||||| |||| ||||||  |||||||||||| || ||  ||||||||||| |||
Sbjct: 3827 ggccaatcacgttcaatagaaatacgtttttccttgcccaaaggaatgccttgcatcagg 3768

                      
Query: 673  accgtattca 682
            ||||||||||
Sbjct: 3767 accgtattca 3758



 Score =  168 bits (85), Expect = 2e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                        
Query: 210  cgaaggcttcgacctcttgctgttgagctgtgccaccgggaactccaccagaacgatgaa 269
            ||||||||| |||| ||||||| ||||||| || ||||||||||| | ||| | ||||||
Sbjct: 4836 cgaaggcttggaccgcttgctgctgagctgggcgaccgggaactctatcaggatgatgaa 4777

                                                                        
Query: 270  cgaggagctctctgcttcccggaggtactgtaccgtgccgctcatcgtcttcacgagctt 329
            ||| ||| | || ||||| || |||||||| | ||||||||||||||| ||||| |||||
Sbjct: 4776 cgaagaggtgtcggcttctcgtaggtactgcaacgtgccgctcatcgttttcaccagctt 4717

                                                                        
Query: 330  ctggcttatgtgcaggccgaggccttctcgggatacccctgggccgtggcggaacatctc 389
            ||||||||||| ||||||||| || || | ||| |||||||||  |||  ||||||||||
Sbjct: 4716 ctggcttatgtacaggccgagaccctccctggacacccctgggttgtgctggaacatctc 4657

                                                     
Query: 390  ctgtatcagcgcctccgggacgcctggcgctgggtggacaa 430
            ||||||||| ||||| || |||||||| ||||| |||||||
Sbjct: 4656 ctgtatcagggcctctggaacgcctggagctggatggacaa 4616

---

>gb|AY190015.1| Stellaria longipes PHYA4 photoreceptor (PHYA4) mRNA, complete cds
          Length = 3600

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 548  agtctgctaggacttgctgaagccttaagttatccccatatag 590
            |||| ||||||| ||| |||||||||| | |||||||||||||
Sbjct: 3190 agtcggctaggatttgttgaagccttaggctatccccatatag 3148

---

>gb|AY190013.1| Stellaria longipes PHYA2 photoreceptor (PHYA2) mRNA, complete cds
          Length = 3632

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 548  agtctgctaggacttgctgaagccttaagttatccccatatag 590
            |||| ||||||| ||| |||||||||| | |||||||||||||
Sbjct: 3159 agtcggctaggatttgttgaagccttaggctatccccatatag 3117

---

>gb|AF544027.1| Stellaria longipes ecotype prairie phytochrome A1 (PHYA1) mRNA,
            complete cds
          Length = 3723

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 548  agtctgctaggacttgctgaagccttaagttatccccatatag 590
            |||| ||||||| ||| |||||||||| | |||||||||||||
Sbjct: 3238 agtcggctaggatttgttgaagccttaggctatccccatatag 3196

---

>gb|AY394847.1| Arabidopsis thaliana ecotype Kas-1 phytochrome c (phyC) gene,
            complete cds
          Length = 3785

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 556  aggacttgctgaagccttaagttatccccatataggtacattgatgatacttct 609
            |||| |||||||||||||||||| || ||||| ||   ||||||||| ||||||
Sbjct: 3284 aggatttgctgaagccttaagttgtctccatacagtctcattgatgaaacttct 3231

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 618      atcacgatcaagagaaatttgt 639
                ||||||||||||||||||||||
Sbjct: 11514379 atcacgatcaagagaaatttgt 11514358

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 618      atcacgatcaagagaaatttgt 639
                ||||||||||||||||||||||
Sbjct: 14455105 atcacgatcaagagaaatttgt 14455084

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 618     atcacgatcaagagaaatttgt 639
               ||||||||||||||||||||||
Sbjct: 8112353 atcacgatcaagagaaatttgt 8112374

---

>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0673E01
          Length = 125909

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 618   atcacgatcaagagaaatttgt 639
             ||||||||||||||||||||||
Sbjct: 75436 atcacgatcaagagaaatttgt 75415

---

>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1034_C08
          Length = 154441

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 618   atcacgatcaagagaaatttgt 639
             ||||||||||||||||||||||
Sbjct: 68513 atcacgatcaagagaaatttgt 68492

---

>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0624H09
          Length = 158719

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 618  atcacgatcaagagaaatttgt 639
            ||||||||||||||||||||||
Sbjct: 4716 atcacgatcaagagaaatttgt 4737

---

>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0592E11
          Length = 153734

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 618    atcacgatcaagagaaatttgt 639
              ||||||||||||||||||||||
Sbjct: 136122 atcacgatcaagagaaatttgt 136143

---

>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1114E07
          Length = 135511

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 618    atcacgatcaagagaaatttgt 639
              ||||||||||||||||||||||
Sbjct: 128368 atcacgatcaagagaaatttgt 128347

---

>emb|Z32538.1|ATPHYCG A.thaliana phyC gene
          Length = 3853

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 556  aggacttgctgaagccttaagttatccccatataggtacattgatgatacttct 609
            |||| |||||||||||||||||| || ||||| ||   ||||||||| ||||||
Sbjct: 3344 aggatttgctgaagccttaagttgtctccatacagtctcattgatgaaacttct 3291

---

>gb|BT019007.1| Zea mays clone Contig497.F mRNA sequence
          Length = 807

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 507 cccttcagctggccgagtaaa 527
           |||||||||||||||||||||
Sbjct: 122 cccttcagctggccgagtaaa 102

---

>emb|AL354920.21| Human DNA sequence from clone RP11-522I20 on chromosome 9 Contains a
             novel gene, the UBQLN1 gene for ubiquilin 1 (DA41, DSK2,
             XDRP1, PLIC-1), the 3' UTR of the gene for protein kinase
             anchoring protein GKAP42 (FKSG21) and two CpG islands,
             complete sequence
          Length = 168804

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 623   gatcaagagaaatttgttttt 643
             |||||||||||||||||||||
Sbjct: 21091 gatcaagagaaatttgttttt 21111

---

>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2
          Length = 384550

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    tattaaaattacactaaaaac 36
             |||||||||||||||||||||
Sbjct: 52363 tattaaaattacactaaaaac 52383

---

>gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, complete sequence
          Length = 120871

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 638   gtttttccttgctcagagaca 658
             |||||||||||||||||||||
Sbjct: 81766 gtttttccttgctcagagaca 81786

---

>ref|NM_127191.2| Arabidopsis thaliana THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate
            reductase/ thymidylate synthase AT2G16370 (THY-1) mRNA,
            complete cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gattcagaagttgctcttgc 181
            ||||||||||||||||||||
Sbjct: 1541 gattcagaagttgctcttgc 1522

---

>ref|NM_122975.2| Arabidopsis thaliana PHYC (PHYTOCHROME DEFECTIVE C) AT5G35840 (PHYC)
            mRNA, complete cds
          Length = 3704

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 556  aggacttgctgaagccttaagttatccccata 587
            |||| |||||||||||||||||| || |||||
Sbjct: 3231 aggatttgctgaagccttaagttgtctccata 3200

---

>gb|AE000662.1|HUAE000662 Homo sapiens T-cell receptor alpha delta locus from bases 1000498 to
             1071650 (section 5 of 5) of the Complete Nucleotide
             Sequence
          Length = 71153

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaaaacctaacagctcagct 50
             ||||||||||||||||||||
Sbjct: 24915 aaaaacctaacagctcagct 24896

---

>gb|AC115063.8| Mus musculus chromosome 1, clone RP24-400H18, complete sequence
          Length = 192133

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 627   aagagaaatttgtttttcct 646
             ||||||||||||||||||||
Sbjct: 18948 aagagaaatttgtttttcct 18929

---

>gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184853

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agctacacatatgatacata 117
             ||||||||||||||||||||
Sbjct: 97894 agctacacatatgatacata 97913

---

>gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome 9, complete sequence
          Length = 144131

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aagctcttctagcaacccaa 145
              ||||||||||||||||||||
Sbjct: 140454 aagctcttctagcaacccaa 140473

---

>gb|AC135963.3| Mus musculus BAC clone RP23-346N11 from chromosome 7, complete sequence
          Length = 202404

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     cagctagctaagctcctcct 65
              ||||||||||||||||||||
Sbjct: 172251 cagctagctaagctcctcct 172232

---

>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ccatgttcccagctacacat 107
             ||||||||||||||||||||
Sbjct: 64964 ccatgttcccagctacacat 64945

---

>gb|AF022968.1| Caenorhabditis elegans cosmid C10F3, complete sequence
          Length = 40172

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 625  tcaagagaaatttgtttttc 644
            ||||||||||||||||||||
Sbjct: 6395 tcaagagaaatttgtttttc 6414

---

>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence
          Length = 175079

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 639   tttttccttgctcagagaca 658
             ||||||||||||||||||||
Sbjct: 63706 tttttccttgctcagagaca 63687

---

>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence
          Length = 156293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 39    aacagctcagctagctaagctcctcctc 66
             ||||||||||| ||||||||||||||||
Sbjct: 85737 aacagctcagc-agctaagctcctcctc 85711

---

>gb|AC158765.4| Mus musculus chromosome 1, clone RP24-218I23, complete sequence
          Length = 130451

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 627   aagagaaatttgtttttcct 646
             ||||||||||||||||||||
Sbjct: 37924 aagagaaatttgtttttcct 37905

---

>gb|AY114032.1| Arabidopsis thaliana putative dihydrofolate reductase-thymidylate
            synthase (At2g16370) mRNA, complete cds
          Length = 1591

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gattcagaagttgctcttgc 181
            ||||||||||||||||||||
Sbjct: 1432 gattcagaagttgctcttgc 1413

---

>gb|AY063968.1| Arabidopsis thaliana putative dihydrofolate reductase-thymidylate
            synthase (At2g16370) mRNA, complete cds
          Length = 1821

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gattcagaagttgctcttgc 181
            ||||||||||||||||||||
Sbjct: 1541 gattcagaagttgctcttgc 1522

---

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 208     gtcgaaggcttcgacctctt 227
               ||||||||||||||||||||
Sbjct: 1864373 gtcgaaggcttcgacctctt 1864354

---

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 448    gcaatctgcatgccagaacc 467
              ||||||||||||||||||||
Sbjct: 158970 gcaatctgcatgccagaacc 158989

---

>gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosome 13, complete
             sequence
          Length = 197018

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 633   aatttgtttttccttgctca 652
             ||||||||||||||||||||
Sbjct: 79123 aatttgtttttccttgctca 79142

---

>gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, complete sequence
          Length = 144448

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    attaaaattacactaaaaac 36
             ||||||||||||||||||||
Sbjct: 23043 attaaaattacactaaaaac 23062

---

>gb|AC007047.7| Arabidopsis thaliana chromosome 2 clone F16F14 map mi398, complete
             sequence
          Length = 114418

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   gattcagaagttgctcttgc 181
             ||||||||||||||||||||
Sbjct: 63532 gattcagaagttgctcttgc 63513

---

>gb|AY065040.1| Arabidopsis thaliana AT5g35840/MIK22_15 mRNA sequence
          Length = 3324

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 556  aggacttgctgaagccttaagttatccccata 587
            |||| |||||||||||||||||| || |||||
Sbjct: 3231 aggatttgctgaagccttaagttgtctccata 3200

---

>gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-delta gene, exons 1-2; T-cell
             receptor alpha (Tcr-alpha) gene, J1-J61 segments; and
             Tcr-C-alpha gene, exons 1-4
          Length = 97630

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaaaacctaacagctcagct 50
             ||||||||||||||||||||
Sbjct: 59024 aaaaacctaacagctcagct 59005

---

>emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in linkage group 11,
             complete sequence
          Length = 153078

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 434   tgaattctagatgagcaatctgcatgccagaa 465
             |||||||||||||| ||||||  |||||||||
Sbjct: 15451 tgaattctagatgatcaatctaaatgccagaa 15482

---

>emb|BX820156.1|CNS0A82Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS82ZF08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2060

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gattcagaagttgctcttgc 181
            ||||||||||||||||||||
Sbjct: 1789 gattcagaagttgctcttgc 1770

---

>gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I21, complete sequence
          Length = 123050

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 639   tttttccttgctcagagaca 658
             ||||||||||||||||||||
Sbjct: 41314 tttttccttgctcagagaca 41295

---

>gb|AC138570.1| Zea mays genomic clone ZM16H10, finished contig 37375, complete
            sequence
          Length = 20702

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 342  caggccgaggccttctcggg 361
            ||||||||||||||||||||
Sbjct: 1641 caggccgaggccttctcggg 1660

---

>gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete sequence
          Length = 189507

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    aacctaacagctcagctagctaag 57
             ||||||||| ||||||||||||||
Sbjct: 70795 aacctaacacctcagctagctaag 70772

---

>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence
          Length = 189238

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 39    aacagctcagctagctaagctcctcctc 66
             ||||||||||| ||||||||||||||||
Sbjct: 45530 aacagctcagc-agctaagctcctcctc 45556

---

>dbj|AB005236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK22
          Length = 82035

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 556   aggacttgctgaagccttaagttatccccata 587
             |||| |||||||||||||||||| || |||||
Sbjct: 58958 aggatttgctgaagccttaagttgtctccata 58927

---

>emb|X17343.1|ATPHYC Arabidopsis thaliana phyC mRNA for phytochrome
          Length = 3699

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 556  aggacttgctgaagccttaagttatccccata 587
            |||| |||||||||||||||||| || |||||
Sbjct: 3226 aggatttgctgaagccttaagttgtctccata 3195

---

>gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, complete sequence
          Length = 214934

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 624   atcaagagaaatttgttttt 643
             ||||||||||||||||||||
Sbjct: 24295 atcaagagaaatttgttttt 24276

---

>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 633   aatttgtttttccttgctca 652
             ||||||||||||||||||||
Sbjct: 23894 aatttgtttttccttgctca 23875

---

>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence
          Length = 202273

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    tggattcagaagttgctcttgctc 183
              ||||||||||||||| ||||||||
Sbjct: 185220 tggattcagaagttggtcttgctc 185197

---

>emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on chromosome 9, complete
              sequence
          Length = 208050

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    aagctcttctagcaacccaa 145
              ||||||||||||||||||||
Sbjct: 194366 aagctcttctagcaacccaa 194385

---

>emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete
              sequence
          Length = 221319

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 624    atcaagagaaatttgttttt 643
              ||||||||||||||||||||
Sbjct: 113598 atcaagagaaatttgttttt 113617

---

>emb|CR550305.7| Zebrafish DNA sequence from clone DKEY-205E15 in linkage group 11,
             complete sequence
          Length = 159061

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 434   tgaattctagatgagcaatctgcatgccagaa 465
             |||||||||||||| ||||||  |||||||||
Sbjct: 66121 tgaattctagatgatcaatctaaatgccagaa 66152

---

>gb|AC133947.3| Mus musculus BAC clone RP24-189I2 from 9, complete sequence
          Length = 168997

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aagctcttctagcaacccaa 145
             ||||||||||||||||||||
Sbjct: 21710 aagctcttctagcaacccaa 21729

---

>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      aaaaacctaacagctcagct 50
               ||||||||||||||||||||
Sbjct: 1025410 aaaaacctaacagctcagct 1025391

---

>emb|AL603836.13| Mouse DNA sequence from clone RP23-56A14 on chromosome 7, complete
             sequence
          Length = 215366

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    cagctagctaagctcctcct 65
             ||||||||||||||||||||
Sbjct: 96666 cagctagctaagctcctcct 96647

---

>gb|L08593.1|ATHDRTHYX Arabidopsis thaliana dihydrofolate reductase-thymidylate synthase
            (THY-1) mRNA, exons 1 through 9 and complete cds
          Length = 2418

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 161  ggattcagaagttgctcttg 180
            ||||||||||||||||||||
Sbjct: 2200 ggattcagaagttgctcttg 2181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,362,633
Number of Sequences: 3902068
Number of extensions: 5362633
Number of successful extensions: 97173
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 96742
Number of HSP's gapped (non-prelim): 423
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---