ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaak39e02 |
|---|---|
| Clone Library Name | barley_pub |
>SGPL_ARATH (Q9C509) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 544 Score = 207 bits (527), Expect = 2e-53 Identities = 95/130 (73%), Positives = 116/130 (89%) Frame = -2 Query: 575 LESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNA 396 L++T +IME SK++++G+ +I LFVIGKPDMT+VAFGS A+DIFEVNDIMSSKGWHLNA Sbjct: 413 LQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNA 472 Query: 395 LQRPNSLHICVTLQHTAIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRGTV 216 LQRPNS+HIC+TLQH + ++FL+DL ++V TVKANPGPI+GG+APIYGAAGKMPDRG V Sbjct: 473 LQRPNSIHICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMV 532 Query: 215 KELLVEFMDS 186 ELLV FMDS Sbjct: 533 NELLVSFMDS 542
>SGPL1_HUMAN (O95470) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (hSPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 109 bits (273), Expect = 5e-24 Identities = 53/132 (40%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Frame = -2 Query: 575 LESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNA 396 +E+T QI++ ++ ++ +++I G+FV G P ++V+A GS DI+ ++++M++KGW+LN Sbjct: 417 VEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQ 476 Query: 395 LQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRG 222 LQ P S+H C+TL H + +FLKD+ +SV + NP + GM IYG A DR Sbjct: 477 LQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDRN 536 Query: 221 TVKELLVEFMDS 186 V EL F+DS Sbjct: 537 MVAELSSVFLDS 548
>SGPL1_RAT (Q8CHN6) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 108 bits (269), Expect = 1e-23 Identities = 51/132 (38%), Positives = 86/132 (65%), Gaps = 2/132 (1%) Frame = -2 Query: 575 LESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNA 396 +E+T QI++ ++ ++ +++I +F++G P ++V+A GS+ DI+ ++++MS+KGW+ N Sbjct: 417 VEATKQIIKTARFLKSELENIKNIFILGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFNY 476 Query: 395 LQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRG 222 LQ P S+H C+TL HT + +FLKD+ +SV + NP + GM IYG A DR Sbjct: 477 LQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQATIDRK 536 Query: 221 TVKELLVEFMDS 186 V E+ F+DS Sbjct: 537 MVAEISSVFLDS 548
>SGPL_DROME (Q9V7Y2) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 545 Score = 107 bits (266), Expect = 3e-23 Identities = 52/133 (39%), Positives = 86/133 (64%), Gaps = 3/133 (2%) Frame = -2 Query: 575 LESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNA 396 LE+T +I++ ++ I++G+ DI G+F+ GKP +V+A GS+ DIF ++D + GW+LNA Sbjct: 406 LEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIFRLSDSLCKLGWNLNA 465 Query: 395 LQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPG-PISGGMAPIYGAAGKMPDR 225 LQ P+ +H+CVT HT + ++F+ D+ + +PG P+ G MA +YG A +PDR Sbjct: 466 LQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEIMKDPGQPVVGKMA-LYGMAQSIPDR 524 Query: 224 GTVKELLVEFMDS 186 + E+ F+ S Sbjct: 525 SVIGEVTRLFLHS 537
>SGPL1_MOUSE (Q8R0X7) Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase)| (mSPL) (Sphingosine-1-phosphate aldolase) Length = 568 Score = 105 bits (263), Expect = 7e-23 Identities = 50/131 (38%), Positives = 84/131 (64%), Gaps = 2/131 (1%) Frame = -2 Query: 575 LESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNA 396 +E+T QI++ ++ ++ +++I +F+ G P ++V+A GS+ DI+ ++++MS+KGW+ N Sbjct: 417 VEATKQIIKTARFLKSELENIKNIFIFGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFNY 476 Query: 395 LQRPNSLHICVTLQHT--AIYEEFLKDLEDSVNTVKANPGPISGGMAPIYGAAGKMPDRG 222 LQ P S+H C+TL HT + +FLKD+ +SV + NP + GM IYG A DR Sbjct: 477 LQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQATIDRK 536 Query: 221 TVKELLVEFMD 189 V E+ F+D Sbjct: 537 LVAEISSVFLD 547
>SGPL_YEAST (Q05567) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (ySPL) (Sphingosine-1-phosphate aldolase) (Bestowed of sphingosine tolerance 1) Length = 589 Score = 85.5 bits (210), Expect = 1e-16 Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 2/131 (1%) Frame = -2 Query: 572 ESTGQIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNAL 393 E G M+ K IQ+ I D++ ++G P +V++F S ++I E++D +S KGWH NAL Sbjct: 449 EIVGAAMKFKKYIQENIPDLN---IMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNAL 505 Query: 392 QRPNSLHICVTLQHTAIYEEFLKDLEDSVNTVK--ANPGPISGGMAPIYGAAGKMPDRGT 219 Q+P +LH+ T + +E L +V +K +N P G + +YG AG + G Sbjct: 506 QKPVALHMAFTRLSAHVVDEICDILRTTVQELKSESNSKPSPDGTSALYGVAGSVKTAGV 565 Query: 218 VKELLVEFMDS 186 +L+V F+D+ Sbjct: 566 ADKLIVGFLDA 576
>SGPL_CAEEL (Q9Y194) Sphingosine-1-phosphate lyase (EC 4.1.2.27) (SP-lyase)| (SPL) (Sphingosine-1-phosphate aldolase) Length = 552 Score = 75.9 bits (185), Expect = 8e-14 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%) Frame = -2 Query: 560 QIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNALQRPN 381 QI++ ++ + + I+ I + GK D+++VAF + V+I+EV+D M GW+LN LQ P Sbjct: 416 QIVKHTRMLAEKIEKIKWIKPYGKSDVSLVAFSGNGVNIYEVSDKMMKLGWNLNTLQNPA 475 Query: 380 SLHICVTLQ--HTAIYEEFLKDLEDSVNTVKA-NPGPISGGMAPIYGAAGKMPDRGTVKE 210 ++HIC+T+ + + F DLE + A GMA +YG A ++P + V E Sbjct: 476 AIHICLTINQANEEVVNAFAVDLEKICEELAAKGEQKADSGMAAMYGMAAQVP-KSVVDE 534 Query: 209 LLVEFMDSS 183 ++ ++D++ Sbjct: 535 VIALYIDAT 543
>MFNA_METTH (O27188) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 363 Score = 35.4 bits (80), Expect = 0.12 Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 4/86 (4%) Frame = -2 Query: 560 QIMEVSKKIQKGIDDISGLFVIGKPDMTVVAFGSDAVDIFEVNDIMSSKGWHLNALQRPN 381 ++M V+++++ G+ ++ V+ +P++ +VAF A+ E+ D + GW ++ P Sbjct: 275 RVMGVTRRLRDGLVELDYQLVV-EPELNIVAFNHPAMGPHELADRLEELGWAVSVSSCPP 333 Query: 380 SLHICVTLQHTAIYEE----FLKDLE 315 ++ + V + H I EE L+DLE Sbjct: 334 AIRV-VLMPH--IMEEHIELLLRDLE 356
>Y087_DEIRA (Q9RY63) UPF0168 protein DR0087| Length = 157 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +3 Query: 246 RAVDRSHPPADRPWIRFHGVYRILEILEEFLVNCRVLKCHAD 371 RA+ P D +IRF VYR + LE F+ R LK H D Sbjct: 108 RAMTFLRPLDDVAYIRFASVYRDFDSLERFIEEIRGLKGHED 149
>SMG1_CAEBR (Q61CW2) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)| (Suppressor with morphogenetic effect on genitalia protein 1) Length = 2319 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 6/58 (10%) Frame = +3 Query: 189 VHELYK*LLDRASVWHLPSRAVDRSHPPADRP------WIRFHGVYRILEILEEFLVN 344 + L K +++R S P + PPA P W+R H + +++E+LE+ +++ Sbjct: 776 IKRLAKEVINRKSSDKKPKSTTEDVPPPATPPLKFSIQWLRVHLLLKLIEVLEKIMIS 833
>IFRD2_HUMAN (Q12894) Interferon-related developmental regulator 2 (SKMC15| protein) Length = 442 Score = 29.3 bits (64), Expect = 8.4 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 413 LLMTLCHSPQICRPRPTQRPRQSCLVSQSQINLR 514 LL+T+C S QI Q PR L+S +NLR Sbjct: 244 LLLTICPSTQISHILDRQLPRLPQLLSSESVNLR 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,767,611 Number of Sequences: 219361 Number of extensions: 1803388 Number of successful extensions: 4808 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4802 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
