Clone Name | rbaal26g22 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK059335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A11, full insert sequence Length = 1555 Score = 478 bits (241), Expect = e-131 Identities = 433/497 (87%) Strand = Plus / Minus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| |||||||| Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacggaaccag 1287 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 1046 tcggaggacttgctgac 1030
>ref|XM_550243.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1555 Score = 470 bits (237), Expect = e-129 Identities = 432/497 (86%) Strand = Plus / Minus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| || ||||| Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1287 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 1046 tcggaggacttgctgac 1030
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 470 bits (237), Expect = e-129 Identities = 432/497 (86%) Strand = Plus / Plus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 3357703 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 3357762 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 3357763 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 3357822 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 3357823 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 3357882 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| || ||||| Sbjct: 3357883 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 3357942 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 3357943 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 3358002 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 3358003 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 3358062 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 3358063 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 3358122 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 3358123 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 3358182 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 3358183 tcggaggacttgctgac 3358199
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 470 bits (237), Expect = e-129 Identities = 432/497 (86%) Strand = Plus / Plus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 36073 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 36132 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 36133 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 36192 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 36193 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 36252 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| || ||||| Sbjct: 36253 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 36312 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 36313 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 36372 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 36373 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 36432 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 36433 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 36492 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 36493 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 36552 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 36553 tcggaggacttgctgac 36569
>dbj|AK121956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M13, full insert sequence Length = 3640 Score = 470 bits (237), Expect = e-129 Identities = 432/497 (86%) Strand = Plus / Plus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 1628 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1687 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 1688 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1747 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 1748 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1807 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| || ||||| Sbjct: 1808 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1867 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 1868 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1927 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 1928 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1987 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 1988 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 2047 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 2048 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 2107 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 2108 tcggaggacttgctgac 2124
>dbj|AK103011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116J22, full insert sequence Length = 1695 Score = 470 bits (237), Expect = e-129 Identities = 432/497 (86%) Strand = Plus / Minus Query: 155 aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467 Query: 215 tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274 |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407 Query: 275 cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334 ||||||||||||||||||| ||||| || ||||||||||| ||||| || || ||| Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347 Query: 335 ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394 || | ||||||| ||||||||| ||||||||| | ||||||||||||| || ||||| Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1287 Query: 395 gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454 |||| ||||||||||| || ||||||||||||||||||| | |||||||||||||||| Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227 Query: 455 atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514 | || || || ||||||||||||||||||| ||||||||| ||||||||||| || ||| Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167 Query: 515 ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574 |||||||||||||||| ||| ||||||||||| ||| || ||||| || ||||||| | Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107 Query: 575 tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634 |||||||| ||||||||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047 Query: 635 tcggatgacttgctgac 651 ||||| ||||||||||| Sbjct: 1046 tcggaggacttgctgac 1030
>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence Length = 141028 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Minus Query: 216 gtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccat 267 ||||||||||||| || |||| ||||||||| ||||| || ||||| ||||| Sbjct: 86820 gtttgtttggccaataagttaaccaaatccaacctcttatctcccactccat 86769 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 ataactttctgtatctcttaaatg 61 ||||||||||||||||||| |||| Sbjct: 48682 ataactttctgtatctcttcaatg 48659
>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence Length = 183666 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 gccaaatccagcctctgatttcc 259 ||||||||||||||||||||||| Sbjct: 54788 gccaaatccagcctctgatttcc 54766
>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence Length = 210372 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 tctctgaattcaagccaccttg 194 |||||||||||||||||||||| Sbjct: 136144 tctctgaattcaagccaccttg 136165
>emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chromosome 6, complete sequence Length = 205043 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 44 ttctgtatctcttaaatgtata 65 |||||||||||||||||||||| Sbjct: 20477 ttctgtatctcttaaatgtata 20456 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ttctgtatctcttaaatgtat 23 ||||||||||||||||||||| Sbjct: 20477 ttctgtatctcttaaatgtat 20457
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gataactttatttatttatac 101 ||||||||||||||||||||| Sbjct: 6085874 gataactttatttatttatac 6085894
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gataactttatttatttatac 101 ||||||||||||||||||||| Sbjct: 51356 gataactttatttatttatac 51376
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 gataactttatttatttatac 101 ||||||||||||||||||||| Sbjct: 106713 gataactttatttatttatac 106733
>gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, complete sequence Length = 186140 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 aatccagcctctgatttccc 260 |||||||||||||||||||| Sbjct: 101406 aatccagcctctgatttccc 101425
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gaatttccagggtttcatgg 530 |||||||||||||||||||| Sbjct: 212436 gaatttccagggtttcatgg 212455
>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete sequence Length = 209755 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 atttatacactgctatacag 113 |||||||||||||||||||| Sbjct: 105707 atttatacactgctatacag 105688
>gb|AY297391.1| Naphrys pulex cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1047 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 tcctttgtttgtttggccagtagg 233 |||||||||||||||| ||||||| Sbjct: 282 tcctttgtttgtttggtcagtagg 305
>emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chromosome 13, complete sequence Length = 204148 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 gacattctctgaattcaagccacc 191 ||||||||||||| |||||||||| Sbjct: 28616 gacattctctgaagtcaagccacc 28593
>gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome 18, complete sequence Length = 222376 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 aatacgataactttatttatttat 99 ||||| |||||||||||||||||| Sbjct: 37278 aatacaataactttatttatttat 37255
>gb|AC122465.4| Mus musculus BAC clone RP24-304I22 from chromosome 13, complete sequence Length = 142340 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 gacattctctgaattcaagccacc 191 ||||||||||||| |||||||||| Sbjct: 5889 gacattctctgaagtcaagccacc 5912
>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete sequence Length = 176782 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 gaatttccagggtttcatgg 530 |||||||||||||||||||| Sbjct: 97004 gaatttccagggtttcatgg 96985
>gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, complete sequence Length = 177581 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 actttatttatttatacact 104 |||||||||||||||||||| Sbjct: 54266 actttatttatttatacact 54285
>gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosome 14, complete sequence Length = 170417 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 actttatttatttatacact 104 |||||||||||||||||||| Sbjct: 149823 actttatttatttatacact 149842
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1 Contains the 3' part of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 213721 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 aactttgtgaggggaagttgcagacatt 173 |||||||||| || |||||||||||||| Sbjct: 121593 aactttgtgaaggtaagttgcagacatt 121566
>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1 genes, complete cds; and c12.2 gene, partial cds Length = 45142 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aatacgataactttatttat 95 |||||||||||||||||||| Sbjct: 26382 aatacgataactttatttat 26363
>gb|AC008749.6| Homo sapiens chromosome 19 clone CTD-2611O12, complete sequence Length = 142439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 gggaagttgcagacattctc 176 |||||||||||||||||||| Sbjct: 80115 gggaagttgcagacattctc 80134
>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184334 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aatacgataactttatttat 95 |||||||||||||||||||| Sbjct: 69113 aatacgataactttatttat 69132
>dbj|AB225840.1| Aspergillus oryzae cDNA, contig sequence: AoEST2695 Length = 1117 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 gcccttctcgagaccgaact 620 |||||||||||||||||||| Sbjct: 272 gcccttctcgagaccgaact 253
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 gcccttctcgagaccgaact 620 |||||||||||||||||||| Sbjct: 1683861 gcccttctcgagaccgaact 1683880
>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA Length = 3469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aatacgataactttatttat 95 |||||||||||||||||||| Sbjct: 3467 aatacgataactttatttat 3448
>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence Length = 170467 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 agacattctctgaattcaagccac 190 ||||||||||||| |||||||||| Sbjct: 97772 agacattctctgacttcaagccac 97749
>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence Length = 198927 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ggctgaagcagcgaaagctt 420 |||||||||||||||||||| Sbjct: 152978 ggctgaagcagcgaaagctt 152997
>gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome 12, complete sequence Length = 208058 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gaatttccagggtttcatgg 530 |||||||||||||||||||| Sbjct: 29684 gaatttccagggtttcatgg 29703
>gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, complete cds Length = 3471 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aatacgataactttatttat 95 |||||||||||||||||||| Sbjct: 3468 aatacgataactttatttat 3449
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aatacgataactttatttat 95 |||||||||||||||||||| Sbjct: 254608 aatacgataactttatttat 254589
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ggctgaagcagcgaaagctt 420 |||||||||||||||||||| Sbjct: 239532 ggctgaagcagcgaaagctt 239513
>emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chromosome 4, complete sequence Length = 246011 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 agaggtcctttgtttgtttg 224 |||||||||||||||||||| Sbjct: 7740 agaggtcctttgtttgtttg 7721 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,869,719 Number of Sequences: 3902068 Number of extensions: 8869719 Number of successful extensions: 165940 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 165760 Number of HSP's gapped (non-prelim): 174 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)