ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal26g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 478 e-131
2ref|XM_550243.1| Oryza sativa (japonica cultivar-group), mRNA 470 e-129
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 470 e-129
4dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 470 e-129
5dbj|AK121956.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129
6dbj|AK103011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 470 e-129
7gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete s... 48 0.037
8gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, comple... 46 0.14
9gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complet... 44 0.57
10emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chr... 44 0.57
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
12dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
13dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
14gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, co... 40 8.9
15gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome... 40 8.9
16gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromo... 40 8.9
17gb|AY297391.1| Naphrys pulex cytochrome oxidase subunit I (COI) ... 40 8.9
18emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chr... 40 8.9
19gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome... 40 8.9
20gb|AC122465.4| Mus musculus BAC clone RP24-304I22 from chromosom... 40 8.9
21gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosom... 40 8.9
22gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, compl... 40 8.9
23gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosom... 40 8.9
24emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20... 40 8.9
25gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; ... 40 8.9
26gb|AC008749.6| Homo sapiens chromosome 19 clone CTD-2611O12, com... 40 8.9
27gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 40 8.9
28dbj|AB225840.1| Aspergillus oryzae cDNA, contig sequence: AoEST2695 40 8.9
29dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 8.9
30ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz),... 40 8.9
31gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, comple... 40 8.9
32gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome ... 40 8.9
33gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome... 40 8.9
34gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, ... 40 8.9
35gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 8.9
36emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr... 40 8.9
37emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chro... 40 8.9

>dbj|AK059335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A11, full
            insert sequence
          Length = 1555

 Score =  478 bits (241), Expect = e-131
 Identities = 433/497 (87%)
 Strand = Plus / Minus

                                                                        
Query: 155  aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
            |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467

                                                                        
Query: 215  tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
            |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407

                                                                        
Query: 275  cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
            |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347

                                                                        
Query: 335  ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
            || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| |||||||| 
Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacggaaccag 1287

                                                                        
Query: 395  gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
            ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227

                                                                        
Query: 455  atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
            |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167

                                                                        
Query: 515  ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
            |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107

                                                                        
Query: 575  tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
            |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047

                             
Query: 635  tcggatgacttgctgac 651
            ||||| |||||||||||
Sbjct: 1046 tcggaggacttgctgac 1030



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>ref|XM_550243.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1555

 Score =  470 bits (237), Expect = e-129
 Identities = 432/497 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
            |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467

                                                                        
Query: 215  tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
            |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407

                                                                        
Query: 275  cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
            |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347

                                                                        
Query: 335  ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
            || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| || ||||| 
Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1287

                                                                        
Query: 395  gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
            ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227

                                                                        
Query: 455  atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
            |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167

                                                                        
Query: 515  ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
            |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107

                                                                        
Query: 575  tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
            |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047

                             
Query: 635  tcggatgacttgctgac 651
            ||||| |||||||||||
Sbjct: 1046 tcggaggacttgctgac 1030



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  470 bits (237), Expect = e-129
 Identities = 432/497 (86%)
 Strand = Plus / Plus

                                                                           
Query: 155     aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
               |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 3357703 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 3357762

                                                                           
Query: 215     tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
               |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 3357763 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 3357822

                                                                           
Query: 275     cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
               |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 3357823 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 3357882

                                                                           
Query: 335     ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
               || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| || ||||| 
Sbjct: 3357883 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 3357942

                                                                           
Query: 395     gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
               ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 3357943 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 3358002

                                                                           
Query: 455     atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
               |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 3358003 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 3358062

                                                                           
Query: 515     ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
               |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 3358063 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 3358122

                                                                           
Query: 575     tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
               |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 3358123 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 3358182

                                
Query: 635     tcggatgacttgctgac 651
               ||||| |||||||||||
Sbjct: 3358183 tcggaggacttgctgac 3358199



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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0701D05
          Length = 172161

 Score =  470 bits (237), Expect = e-129
 Identities = 432/497 (86%)
 Strand = Plus / Plus

                                                                         
Query: 155   aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
             |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 36073 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 36132

                                                                         
Query: 215   tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
             |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 36133 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 36192

                                                                         
Query: 275   cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
             |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 36193 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 36252

                                                                         
Query: 335   ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
             || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| || ||||| 
Sbjct: 36253 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 36312

                                                                         
Query: 395   gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
             ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 36313 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 36372

                                                                         
Query: 455   atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
             |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 36373 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 36432

                                                                         
Query: 515   ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
             |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 36433 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 36492

                                                                         
Query: 575   tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
             |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 36493 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 36552

                              
Query: 635   tcggatgacttgctgac 651
             ||||| |||||||||||
Sbjct: 36553 tcggaggacttgctgac 36569



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>dbj|AK121956.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M13, full
            insert sequence
          Length = 3640

 Score =  470 bits (237), Expect = e-129
 Identities = 432/497 (86%)
 Strand = Plus / Plus

                                                                        
Query: 155  aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
            |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 1628 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1687

                                                                        
Query: 215  tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
            |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 1688 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1747

                                                                        
Query: 275  cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
            |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 1748 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1807

                                                                        
Query: 335  ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
            || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| || ||||| 
Sbjct: 1808 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1867

                                                                        
Query: 395  gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
            ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 1868 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1927

                                                                        
Query: 455  atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
            |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 1928 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1987

                                                                        
Query: 515  ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
            |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 1988 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 2047

                                                                        
Query: 575  tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
            |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 2048 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 2107

                             
Query: 635  tcggatgacttgctgac 651
            ||||| |||||||||||
Sbjct: 2108 tcggaggacttgctgac 2124



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>dbj|AK103011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116J22, full
            insert sequence
          Length = 1695

 Score =  470 bits (237), Expect = e-129
 Identities = 432/497 (86%)
 Strand = Plus / Minus

                                                                        
Query: 155  aggggaagttgcagacattctctgaattcaagccaccttgtttcactgtgagaggtcctt 214
            |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | 
Sbjct: 1526 aggggaagttgcagacattctctgaattcaagcctccttgtttcactgtgaaaggtcttc 1467

                                                                        
Query: 215  tgtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccatagtcttt 274
            |||||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| 
Sbjct: 1466 tgtttgttaggccagtaggtcagccaaatccagcctctaatctcccagtccatggtcttc 1407

                                                                        
Query: 275  cctaatgctgcaccacagactttccagtttacactgtctccatactcatcgcgggcaaaa 334
            |||||||||||||||||||  |||||    || ||||||||||| ||||| || || |||
Sbjct: 1406 cctaatgctgcaccacagatcttccaccagacgctgtctccatattcatcacgtgcgaaa 1347

                                                                        
Query: 335  ataatgccaccctgcttcgtgaacgggcgatacgcattcgagtacctgtcgcggaaccaa 394
            || |  ||||||| ||||||||| ||||||||| |  ||||||||||||| || ||||| 
Sbjct: 1346 atgacaccacccttcttcgtgaatgggcgatacacggtcgagtacctgtcacgaaaccag 1287

                                                                        
Query: 395  gccctcggctgaagcagcgaaagcttggaaggctttgaagcacaaacctcccttccgttc 454
            ||||  ||||||||||| || ||||||||||||||||||| | |||||||||||||||| 
Sbjct: 1286 gcccgtggctgaagcagggagagcttggaaggctttgaagaataaacctcccttccgttt 1227

                                                                        
Query: 455  atgccgtcgtgcagaaaccagttcaaggttgcagtgtttccgtgcacagactgctcgaat 514
            |  || || || ||||||||||||||||||| ||||||||| ||||||||||| || |||
Sbjct: 1226 acaccatcatggagaaaccagttcaaggttgtagtgtttccatgcacagactgttcaaat 1167

                                                                        
Query: 515  ttccagggtttcatggccagcgtgaggctttcagcgactgaggccttgagaccaaatgag 574
            |||||||||||||||| ||| |||||||||||   ||| || ||||| || ||||||| |
Sbjct: 1166 ttccagggtttcatggtcagtgtgaggctttcgctgaccgatgcctttagtccaaatgtg 1107

                                                                        
Query: 575  tttgggggatcgaatgaaccctcaatgcccttctcgagaccgaactcatgggtggggttg 634
            |||||||| ||||||||||| |||||||||||||| || || |||||||| |||||||||
Sbjct: 1106 tttggggggtcgaatgaaccttcaatgcccttctcaaggccaaactcatgcgtggggttg 1047

                             
Query: 635  tcggatgacttgctgac 651
            ||||| |||||||||||
Sbjct: 1046 tcggaggacttgctgac 1030



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>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence
          Length = 141028

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 216   gtttgtttggccagtaggttagccaaatccagcctctgatttcccagtccat 267
             ||||||||||||| || |||| ||||||||| ||||| || ||||| |||||
Sbjct: 86820 gtttgtttggccaataagttaaccaaatccaacctcttatctcccactccat 86769



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    ataactttctgtatctcttaaatg 61
             ||||||||||||||||||| ||||
Sbjct: 48682 ataactttctgtatctcttcaatg 48659



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>gb|AC009487.3| Homo sapiens BAC clone RP11-334E15 from 2, complete sequence
          Length = 183666

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 237   gccaaatccagcctctgatttcc 259
             |||||||||||||||||||||||
Sbjct: 54788 gccaaatccagcctctgatttcc 54766



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>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence
          Length = 210372

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 173    tctctgaattcaagccaccttg 194
              ||||||||||||||||||||||
Sbjct: 136144 tctctgaattcaagccaccttg 136165



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>emb|AL512323.8| Human DNA sequence from clone RP13-445B20 on chromosome 6, complete
             sequence
          Length = 205043

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 44    ttctgtatctcttaaatgtata 65
             ||||||||||||||||||||||
Sbjct: 20477 ttctgtatctcttaaatgtata 20456



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     ttctgtatctcttaaatgtat 23
             |||||||||||||||||||||
Sbjct: 20477 ttctgtatctcttaaatgtat 20457



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      gataactttatttatttatac 101
               |||||||||||||||||||||
Sbjct: 6085874 gataactttatttatttatac 6085894



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>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1006_A02
          Length = 175153

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    gataactttatttatttatac 101
             |||||||||||||||||||||
Sbjct: 51356 gataactttatttatttatac 51376



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>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1003_F05
          Length = 147472

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     gataactttatttatttatac 101
              |||||||||||||||||||||
Sbjct: 106713 gataactttatttatttatac 106733



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>gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, complete sequence
          Length = 186140

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    aatccagcctctgatttccc 260
              ||||||||||||||||||||
Sbjct: 101406 aatccagcctctgatttccc 101425



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>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence
          Length = 216095

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 511    gaatttccagggtttcatgg 530
              ||||||||||||||||||||
Sbjct: 212436 gaatttccagggtttcatgg 212455



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>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete
              sequence
          Length = 209755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     atttatacactgctatacag 113
              ||||||||||||||||||||
Sbjct: 105707 atttatacactgctatacag 105688



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>gb|AY297391.1| Naphrys pulex cytochrome oxidase subunit I (COI) gene, partial cds;
           mitochondrial
          Length = 1047

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 210 tcctttgtttgtttggccagtagg 233
           |||||||||||||||| |||||||
Sbjct: 282 tcctttgtttgtttggtcagtagg 305



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>emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chromosome 13, complete
             sequence
          Length = 204148

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 168   gacattctctgaattcaagccacc 191
             ||||||||||||| ||||||||||
Sbjct: 28616 gacattctctgaagtcaagccacc 28593



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>gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome 18, complete sequence
          Length = 222376

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aatacgataactttatttatttat 99
             ||||| ||||||||||||||||||
Sbjct: 37278 aatacaataactttatttatttat 37255



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>gb|AC122465.4| Mus musculus BAC clone RP24-304I22 from chromosome 13, complete
            sequence
          Length = 142340

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 168  gacattctctgaattcaagccacc 191
            ||||||||||||| ||||||||||
Sbjct: 5889 gacattctctgaagtcaagccacc 5912



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>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete
             sequence
          Length = 176782

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 511   gaatttccagggtttcatgg 530
             ||||||||||||||||||||
Sbjct: 97004 gaatttccagggtttcatgg 96985



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>gb|AC110380.4| Mus musculus BAC clone RP24-194P24 from 14, complete sequence
          Length = 177581

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    actttatttatttatacact 104
             ||||||||||||||||||||
Sbjct: 54266 actttatttatttatacact 54285



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>gb|AC151902.3| Mus musculus BAC clone RP23-240L13 from chromosome 14, complete sequence
          Length = 170417

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     actttatttatttatacact 104
              ||||||||||||||||||||
Sbjct: 149823 actttatttatttatacact 149842



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>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1
              Contains the 3' part of the CACNA1I gene for
              voltage-dependent calcium channel, alpha 1I subunit, ESTs,
              STSs, GSSs and a putative CpG island, complete sequence
          Length = 213721

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 146    aactttgtgaggggaagttgcagacatt 173
              |||||||||| || ||||||||||||||
Sbjct: 121593 aactttgtgaaggtaagttgcagacatt 121566



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>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aatacgataactttatttat 95
             ||||||||||||||||||||
Sbjct: 26382 aatacgataactttatttat 26363



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>gb|AC008749.6| Homo sapiens chromosome 19 clone CTD-2611O12, complete sequence
          Length = 142439

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gggaagttgcagacattctc 176
             ||||||||||||||||||||
Sbjct: 80115 gggaagttgcagacattctc 80134



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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aatacgataactttatttat 95
             ||||||||||||||||||||
Sbjct: 69113 aatacgataactttatttat 69132



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>dbj|AB225840.1| Aspergillus oryzae cDNA, contig sequence: AoEST2695
          Length = 1117

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 601 gcccttctcgagaccgaact 620
           ||||||||||||||||||||
Sbjct: 272 gcccttctcgagaccgaact 253



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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 601     gcccttctcgagaccgaact 620
               ||||||||||||||||||||
Sbjct: 1683861 gcccttctcgagaccgaact 1683880



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>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA
          Length = 3469

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   aatacgataactttatttat 95
            ||||||||||||||||||||
Sbjct: 3467 aatacgataactttatttat 3448



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>gb|AC096675.2| Homo sapiens chromosome 1 clone RP11-80N9, complete sequence
          Length = 170467

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   agacattctctgaattcaagccac 190
             ||||||||||||| ||||||||||
Sbjct: 97772 agacattctctgacttcaagccac 97749



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>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    ggctgaagcagcgaaagctt 420
              ||||||||||||||||||||
Sbjct: 152978 ggctgaagcagcgaaagctt 152997



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>gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome 12, complete sequence
          Length = 208058

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 511   gaatttccagggtttcatgg 530
             ||||||||||||||||||||
Sbjct: 29684 gaatttccagggtttcatgg 29703



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>gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, complete cds
          Length = 3471

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   aatacgataactttatttat 95
            ||||||||||||||||||||
Sbjct: 3468 aatacgataactttatttat 3449



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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     aatacgataactttatttat 95
              ||||||||||||||||||||
Sbjct: 254608 aatacgataactttatttat 254589



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>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
              sequence
          Length = 251037

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    ggctgaagcagcgaaagctt 420
              ||||||||||||||||||||
Sbjct: 239532 ggctgaagcagcgaaagctt 239513



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>emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chromosome 4, complete
            sequence
          Length = 246011

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  agaggtcctttgtttgtttg 224
            ||||||||||||||||||||
Sbjct: 7740 agaggtcctttgtttgtttg 7721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,869,719
Number of Sequences: 3902068
Number of extensions: 8869719
Number of successful extensions: 165940
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 165760
Number of HSP's gapped (non-prelim): 174
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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