>URE23_HELPY (P14916) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 238

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
 Frame = +2

Query: 194 LLRWAAGPVMISREKKLGLLPIQEHVISGGARLEASGAGRRRLCHLLEEG------DDVL 355
           +L +A       +EK + L  ++   +     +E + AG++    L++EG      DDV+
Sbjct: 12  MLHYAGELAKKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVM 71

Query: 356 RRVEQV---TGVGALPTDGTGEVVVAVEVQHRGPFAP 457
             V  +    G+ A+  DGT  V V   ++  G   P
Sbjct: 72  DGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVP 108

>URE23_HELPJ (Q9ZMZ4) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 238

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
 Frame = +2

Query: 194 LLRWAAGPVMISREKKLGLLPIQEHVISGGARLEASGAGRRRLCHLLEEG------DDVL 355
           +L +A       +EK + L  ++   +     +E + AG++    L++EG      DDV+
Sbjct: 12  MLHYAGELARKRKEKGIKLNYVEAVALISAHIMEEARAGKKTAAELMQEGRTLLKPDDVM 71

Query: 356 RRVEQV---TGVGALPTDGTGEVVVAVEVQHRGPFAP 457
             V  +    G+ A+  DGT  V V   ++  G   P
Sbjct: 72  DGVASMIHEVGIEAMFPDGTKLVTVHTPIEANGKLVP 108

>ATS4_HUMAN (O75173) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 4) (ADAM-TS
           4) (ADAM-TS4) (Aggrecanase 1) (ADMP-1)
          Length = 837

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +2

Query: 251 LPIQEHVIS----GGARLEASGAGRRRLCHLLEEGDDVLRRVEQVTGV 382
           LP +E ++      G+ L  SGA  R LC L   G+ +L  +EQ +GV
Sbjct: 55  LPREEEIVFPEKLNGSVLPGSGAPARLLCRLQAFGETLLLELEQDSGV 102

>DPO3B_RICCN (Q92I37) DNA polymerase III beta subunit (EC 2.7.7.7)|
          Length = 379

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -2

Query: 436 LDLNGDNYFSCAVGRKRSNARYLLNSSEDVVSFLKEMAESTTPRAAGLQPGAAADYM 266
           L L+ +     AVG  R NA+ ++NSS+D  SF +  ++ +   A G  P    D +
Sbjct: 287 LSLSRETLEISAVGEARGNAKEVINSSQDKESFYEYNSDESL--AIGFNPQYLEDVL 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,356,134
Number of Sequences: 219361
Number of extensions: 1347985
Number of successful extensions: 3750
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3750
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)