>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score =  165 bits (417), Expect = 8e-41
 Identities = 77/86 (89%), Positives = 83/86 (96%)
 Frame = +3

Query: 261 QKEAETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 440
           +KEAE HLPELKT DG+SIP+EDIGTSQVW+MRYRFWPNNKSRMYLLENTGDFVRSNELQ
Sbjct: 556 KKEAEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQ 615

Query: 441 EGDFIVLYSDVKSGKYLIRGVKVRAA 518
           EGDFIV+YSD+KSGKYLIRGVKVR A
Sbjct: 616 EGDFIVIYSDIKSGKYLIRGVKVRRA 641

>VIV1_MAIZE (P26307) Regulatory protein viviparous-1|
          Length = 691

 Score =  161 bits (408), Expect = 9e-40
 Identities = 76/84 (90%), Positives = 82/84 (97%)
 Frame = +3

Query: 261 QKEAETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 440
           +KEAE HLPELKT DGISIP+EDIGTS+VW+MRYRFWPNNKSRMYLLENTG+FVRSNELQ
Sbjct: 536 KKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGEFVRSNELQ 595

Query: 441 EGDFIVLYSDVKSGKYLIRGVKVR 512
           EGDFIV+YSDVKSGKYLIRGVKVR
Sbjct: 596 EGDFIVIYSDVKSGKYLIRGVKVR 619

>ABI3_ARATH (Q01593) Abscisic acid-insensitive protein 3|
          Length = 720

 Score =  150 bits (380), Expect = 2e-36
 Identities = 70/84 (83%), Positives = 79/84 (94%)
 Frame = +3

Query: 261 QKEAETHLPELKTGDGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLLENTGDFVRSNELQ 440
           +KEAETHLPEL+  DGIS+ +EDIGTS+VW+MRYRFWPNNKSRMYLLENTGDFV++N LQ
Sbjct: 591 KKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQ 650

Query: 441 EGDFIVLYSDVKSGKYLIRGVKVR 512
           EGDFIV+YSDVK GKYLIRGVKVR
Sbjct: 651 EGDFIVIYSDVKCGKYLIRGVKVR 674

>TBB_CANAL (P10875) Tubulin beta chain (Beta tubulin)|
          Length = 449

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = +3

Query: 399 LENTGDFVRSNELQEGDFIVLYSDVKSGKYLIRGVKV 509
           L+N G +V +NELQ+    V +++  SGKY+ R V V
Sbjct: 30  LDNNGTYVGNNELQKSKLDVYFNEATSGKYVPRAVLV 66

>RAV1_ARATH (Q9ZWM9) DNA-binding protein RAV1|
          Length = 344

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
 Frame = +3

Query: 270 AETHLPELKTG---DGISIPIEDIGTSQVWSMRYRFWPNNKSRMYLL-ENTGDFVRSNEL 437
           AE H P   +     G+ +  ED+   +VW  RY +W  N S+ Y+L +    FV+   L
Sbjct: 210 AEKHFPLPSSNVSVKGVLLNFEDVN-GKVWRFRYSYW--NSSQSYVLTKGWSRFVKEKNL 266

Query: 438 QEGDFIVLYSDVKSGKYLIRGVKVRA 515
           + GD +         + L  G K R+
Sbjct: 267 RAGDVVSFSRSNGQDQQLYIGWKSRS 292

>TCF8_MOUSE (Q64318) Transcription factor 8 (Zinc finger homeobox protein 1a)|
           (MEB1) (Delta EF1)
          Length = 1117

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
 Frame = -2

Query: 426 SERSHQCSLEDTFCSCCWAKTGTACSTPEMCR----CPQWGSRCRPPS*APAGESPLPSE 259
           +++S + + +D+ C  C    G   + PE+      CP      +PP  APA E P  S 
Sbjct: 498 TDKSFEGARDDSTCLLCEDCPGDLNALPELKHYDPECP-----AQPPPPAPATEKPESSA 552

Query: 258 TIHGRRDTF*SQP 220
           +  G  D   SQP
Sbjct: 553 SSAGNGDLSPSQP 565

>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan|
           core protein precursor (HSPG) (Perlecan) (PLC)
          Length = 4391

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +3

Query: 240 LFFHGWFQKEAETHLPELKTGDGISIPIEDIGTSQVWSMRYRF-WPNNKSRMYLLENTGD 416
           L  HG  +  A TH   L+  DG+S+P EDI T     MR+   + ++   M     +GD
Sbjct: 13  LLLHG--RLLAVTH--GLRAYDGLSLP-EDIETVTASQMRWTHSYLSDDEDMLADSISGD 67

Query: 417 FVRSNELQEGDFIVLY 464
            + S +L  GDF ++Y
Sbjct: 68  DLGSGDLGSGDFQMVY 83

>TOG4B_AGEAP (P37045) Omega-agatoxin-4B precursor (Omega-agatoxin IVB)|
           (Omega-Aga-IVB) (Omega-agatoxin tsukuba) (Omega-Aga-TK)
          Length = 83

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = -2

Query: 420 RSHQCSLEDTFCSCCWAKTGTACSTPEMCRCPQWGSRC 307
           R   C  ED +  C W   GT C     CRC   G+ C
Sbjct: 35  REDNCIAED-YGKCTWG--GTKCCRGRPCRCSMIGTNC 69

>SIP3_YEAST (P38717) Protein SIP3|
          Length = 1229

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 24/92 (26%), Positives = 34/92 (36%)
 Frame = +3

Query: 159 DFSDFASVSIHGSSCLSADRSVATKKCLFFHGWFQKEAETHLPELKTGDGISIPIEDIGT 338
           D SD+   SIH S  LS D  V  K      GW   + +   P                T
Sbjct: 284 DTSDYNIRSIHSSKLLSKDTQVPPKS-PEKSGWLYMKTQVGKP----------------T 326

Query: 339 SQVWSMRYRFWPNNKSRMYLLENTGDFVRSNE 434
            ++W  R+ F  N    M+LL  +  +V   +
Sbjct: 327 REIWVRRWCFLKNAVFGMFLLSPSKTYVEETD 358

>PKHG4_HUMAN (Q58EX7) Puratrophin-1 (Pleckstrin homology domain-containing|
           family G member 4) (Purkinje cell atrophy-associated
           protein 1)
          Length = 1191

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -2

Query: 519 VRLLPSRPVSDICLTLHRSRAR*NHPPA--AHSSERSHQCSLEDTFCSCCWAKTGTACST 346
           ++L P    + +C++  +  A   HPP   A+S +R+   SL +  C C  A T  AC  
Sbjct: 647 LKLPPVGSTASLCVS--QVPAAPAHPPLRKAYSFDRNLGQSLSEPACHCHHAATIAACRR 704

Query: 345 PE 340
           PE
Sbjct: 705 PE 706

>IF2_CLOTE (Q895J8) Translation initiation factor IF-2|
          Length = 685

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = +3

Query: 306 GISIPIEDIGTSQVWSMRYRFW--PNNKSRMYLLENTGDFVRSNELQEGDFIV--LYSDV 473
           G SIP E +G S+V S   RF+   + K+   + E   +  RS  L      +  LYS +
Sbjct: 417 GPSIPAEILGLSEVPSAGDRFYVVKDEKTAREMAEKRKEKTRSEYLATSKVSLEDLYSQI 476

Query: 474 KSGKYLIRGVKVRA 515
           K GK     + V+A
Sbjct: 477 KEGKIKELNIIVKA 490

>YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in chromosome I|
          Length = 564

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -2

Query: 483 CLTLHRSRAR*NHPPAAHSSERSH---QCSLEDTFCSCCWAKTGTACSTP 343
           C+T   SR R NH       ERS+   +C+  D  C  CW   GT+   P
Sbjct: 301 CMTEQLSRHR-NHKKIFEHIERSYPSVKCANGDDRCVVCWELLGTSRRLP 349


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,848,113
Number of Sequences: 219361
Number of extensions: 1603016
Number of successful extensions: 5104
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5101
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)