Clone Name | bags22p03 |
---|---|
Clone Library Name | barley_pub |
>emb|AM085509.1| Hordeum vulgare mRNA for autophagy protein 9 (atg9 gene) Length = 3302 Score = 1241 bits (626), Expect = 0.0 Identities = 626/626 (100%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 899 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 959 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 1019 Query: 190 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 1079 Query: 250 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 1139 Query: 310 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 1199 Query: 370 tacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcct 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 tacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcct 1259 Query: 430 ggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcca 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 ggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcca 1319 Query: 490 aaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaattc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 aaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaattc 1379 Query: 550 tgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgtt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1380 tgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgtt 1439 Query: 610 ggcattgcaatgctgattctgtcgcc 635 |||||||||||||||||||||||||| Sbjct: 1440 ggcattgcaatgctgattctgtcgcc 1465
>emb|AM085514.1| Triticum aestivum mRNA for autophagy protein 9 (atg9 gene) Length = 3141 Score = 672 bits (339), Expect = 0.0 Identities = 554/627 (88%) Strand = Plus / Plus Query: 9 cttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagc 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 555 cttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggcagc 614 Query: 69 catcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgat 128 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 615 catcaagcataatccattagtaccctttacatttcctaaaatggtcactgttggatcact 674 Query: 129 ggttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaag 188 | |||| ||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 675 gattatcttggtaacatatggacttaccaacttcctcaagttctttgtacaactcagaag 734 Query: 189 tacactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatcca 248 |||| ||||| ||||||||||||| ||| ||||||||| | |||||||| ||||| || Sbjct: 735 tacattgaatattcgtgacttctactgtaacagtcttaaggtcacagatctggagattca 794 Query: 249 gacgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaact 308 ||| ||||||||||||| | || | |||||||||||||| || || ||||| || |||| Sbjct: 795 gactatatcatggcccaaagtagttgagaaggttgtcctcctccagaagtcacaacaact 854 Query: 309 ctgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaa 368 || ||||||| ||| || || ||||||||||||||||||||| ||||| ||||| | || Sbjct: 855 ttgcgttgttaaggacctttcagagcatgatattatcatgagattaatgcggaaacagaa 914 Query: 369 ttacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcc 428 |||||| || |||||||| |||||||||||||| ||||||| || |||||| || Sbjct: 915 ttacttaattgggatggttaataaaggcattattgcatttccggttgcctgttggctgcc 974 Query: 429 tggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcc 488 ||| | || |||||||||| || | | |||| ||||| ||||| |||||| || ||| Sbjct: 975 tggagtaggaccaactgtcagttcgcgtttacatgacaggagaaatcatgtgayacytcc 1034 Query: 489 aaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaatt 548 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1035 aaaagccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagtaaatt 1094 Query: 549 ctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgt 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1095 ctgcgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgt 1154 Query: 609 tggcattgcaatgctgattctgtcgcc 635 ||||||||||||| |||| |||||||| Sbjct: 1155 tggcattgcaatgttgatcctgtcgcc 1181
>dbj|AK100304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D06, full insert sequence Length = 3196 Score = 591 bits (298), Expect = e-165 Identities = 535/614 (87%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 627 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 686 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 687 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 746 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 747 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 806 Query: 190 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 249 ||| ||||| ||||||||||||| ||| ||||| || ||||||||||| |||||||| Sbjct: 807 acattgaatattcgtgacttctactgtaacagtctgaaaattacagatcttgagatccaa 866 Query: 250 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 309 || || |||||||||| |||||| |||||||||||||||||||| || ||| | ||||| Sbjct: 867 accatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactt 926 Query: 310 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 369 |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 tgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaat 986 Query: 370 tacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcct 429 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 987 tacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacct 1046 Query: 430 ggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcca 489 || ||||| |||||||||||||| ||| | || |||| ||||||||| || |||| || Sbjct: 1047 ggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccg 1106 Query: 490 aaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaattc 549 || |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 1107 aaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgatagtaaattc 1166 Query: 550 tgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgtt 609 |||||||| |||||||||||| |||||||||||| || || || |||||||||||||| Sbjct: 1167 tgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtg 1226 Query: 610 ggcattgcaatgct 623 |||||| ||||||| Sbjct: 1227 ggcatttcaatgct 1240
>dbj|AK071419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093B20, full insert sequence Length = 2025 Score = 591 bits (298), Expect = e-165 Identities = 535/614 (87%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 515 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 574 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 575 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 634 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 635 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 694 Query: 190 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 249 ||| ||||| ||||||||||||| ||| ||||| || ||||||||||| |||||||| Sbjct: 695 acattgaatattcgtgacttctactgtaacagtctgaaaattacagatcttgagatccaa 754 Query: 250 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 309 || || |||||||||| |||||| |||||||||||||||||||| || ||| | ||||| Sbjct: 755 accatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactt 814 Query: 310 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 369 |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaat 874 Query: 370 tacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcct 429 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 875 tacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacct 934 Query: 430 ggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcca 489 || ||||| |||||||||||||| ||| | || |||| ||||||||| || |||| || Sbjct: 935 ggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccg 994 Query: 490 aaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaattc 549 || |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 995 aaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgatagtaaattc 1054 Query: 550 tgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgtt 609 |||||||| |||||||||||| |||||||||||| || || || |||||||||||||| Sbjct: 1055 tgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtg 1114 Query: 610 ggcattgcaatgct 623 |||||| ||||||| Sbjct: 1115 ggcatttcaatgct 1128
>dbj|AK070612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060I16, full insert sequence Length = 2552 Score = 583 bits (294), Expect = e-163 Identities = 534/614 (86%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 627 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 686 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 687 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 746 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 747 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 806 Query: 190 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 249 ||| ||||| ||||||||||||| ||| ||||| || ||||||||||| |||||||| Sbjct: 807 acattgaatattcgtgacttctactgtaacagtctgaaaattacagatcttgagatccaa 866 Query: 250 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 309 || || |||||||||| |||||| |||||||||||||||||||| || ||| | ||||| Sbjct: 867 accatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactt 926 Query: 310 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 369 |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 tgtgttgtaagggacgtctcggagcatgatattatcatgagaataatgaggaaagaaaat 986 Query: 370 tacttgatagggatggtgaataaaggcattatctcatttccaattcgtccttggcttcct 429 |||||||| |||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 987 tacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacct 1046 Query: 430 ggtgctggtccaactgtcaaatctcatgtacacgacagaagaaaccatgtggtacttcca 489 || ||||| |||||||||||||| ||| | || |||| ||||||||| || |||| || Sbjct: 1047 ggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccg 1106 Query: 490 aaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagcaaattc 549 || |||||||||||||| |||||||||||||||||||| ||||||||||| || |||||| Sbjct: 1107 aaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgatagtaaattc 1166 Query: 550 tgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgtt 609 |||||||| |||||||||||| |||||||||||| || || || |||||||||||||| Sbjct: 1167 tgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtg 1226 Query: 610 ggcattgcaatgct 623 |||||| ||||||| Sbjct: 1227 ggcatttcaatgct 1240
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 359 bits (181), Expect = 7e-96 Identities = 286/321 (89%) Strand = Plus / Minus Query: 219 tagtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaa 278 |||||| || ||||||||||| |||||||| || || |||||||||| |||||| ||||| Sbjct: 7796621 tagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaa 7796562 Query: 279 ggttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatga 338 ||||||||||||||| || ||| | ||||| |||||||| ||||| || ||||||||||| Sbjct: 7796561 ggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatga 7796502 Query: 339 tattatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcat 398 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 7796501 tattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcat 7796442 Query: 399 tatctcatttccaattcgtccttggcttcctggtgctggtccaactgtcaaatctcatgt 458 ||||||||||||||||||||||||| | ||||| ||||| |||||||||||||| ||| | Sbjct: 7796441 tatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccattt 7796382 Query: 459 acacgacagaagaaaccatgtggtacttccaaaggccctagaatggaccttaaattggtg 518 || |||| ||||||||| || |||| || || |||||||||||||| ||||||||||| Sbjct: 7796381 gcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtg 7796322 Query: 519 catcttccagagtatgtttga 539 ||||||||| ||||||||||| Sbjct: 7796321 catcttccaaagtatgtttga 7796301 Score = 161 bits (81), Expect = 3e-36 Identities = 174/205 (84%) Strand = Plus / Minus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 7796914 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 7796855 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 7796854 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 7796795 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 7796794 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 7796735 Query: 190 acactgaatgcacgtgacttctact 214 ||| ||||| ||||||||||||| Sbjct: 7796734 acattgaatattcgtgacttctact 7796710 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 |||||||||||||| |||||||||||| |||||||||||| || || || ||||||||| Sbjct: 7795635 aaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgta 7795576 Query: 604 tttgttggcattgcaatgct 623 ||||| |||||| ||||||| Sbjct: 7795575 tttgtgggcatttcaatgct 7795556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 359 bits (181), Expect = 7e-96 Identities = 286/321 (89%) Strand = Plus / Minus Query: 219 tagtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaa 278 |||||| || ||||||||||| |||||||| || || |||||||||| |||||| ||||| Sbjct: 7794456 tagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaa 7794397 Query: 279 ggttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatga 338 ||||||||||||||| || ||| | ||||| |||||||| ||||| || ||||||||||| Sbjct: 7794396 ggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatga 7794337 Query: 339 tattatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcat 398 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 7794336 tattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcat 7794277 Query: 399 tatctcatttccaattcgtccttggcttcctggtgctggtccaactgtcaaatctcatgt 458 ||||||||||||||||||||||||| | ||||| ||||| |||||||||||||| ||| | Sbjct: 7794276 tatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccattt 7794217 Query: 459 acacgacagaagaaaccatgtggtacttccaaaggccctagaatggaccttaaattggtg 518 || |||| ||||||||| || |||| || || |||||||||||||| ||||||||||| Sbjct: 7794216 gcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtg 7794157 Query: 519 catcttccagagtatgtttga 539 ||||||||| ||||||||||| Sbjct: 7794156 catcttccaaagtatgtttga 7794136 Score = 161 bits (81), Expect = 3e-36 Identities = 174/205 (84%) Strand = Plus / Minus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 7794749 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 7794690 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 7794689 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 7794630 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 7794629 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 7794570 Query: 190 acactgaatgcacgtgacttctact 214 ||| ||||| ||||||||||||| Sbjct: 7794569 acattgaatattcgtgacttctact 7794545 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 |||||||||||||| |||||||||||| |||||||||||| || || || ||||||||| Sbjct: 7793470 aaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgta 7793411 Query: 604 tttgttggcattgcaatgct 623 ||||| |||||| ||||||| Sbjct: 7793410 tttgtgggcatttcaatgct 7793391
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 359 bits (181), Expect = 7e-96 Identities = 286/321 (89%) Strand = Plus / Plus Query: 219 tagtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaa 278 |||||| || ||||||||||| |||||||| || || |||||||||| |||||| ||||| Sbjct: 57511 tagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaa 57570 Query: 279 ggttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatga 338 ||||||||||||||| || ||| | ||||| |||||||| ||||| || ||||||||||| Sbjct: 57571 ggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatga 57630 Query: 339 tattatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcat 398 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 57631 tattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcat 57690 Query: 399 tatctcatttccaattcgtccttggcttcctggtgctggtccaactgtcaaatctcatgt 458 ||||||||||||||||||||||||| | ||||| ||||| |||||||||||||| ||| | Sbjct: 57691 tatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccattt 57750 Query: 459 acacgacagaagaaaccatgtggtacttccaaaggccctagaatggaccttaaattggtg 518 || |||| ||||||||| || |||| || || |||||||||||||| ||||||||||| Sbjct: 57751 gcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtg 57810 Query: 519 catcttccagagtatgtttga 539 ||||||||| ||||||||||| Sbjct: 57811 catcttccaaagtatgtttga 57831 Score = 161 bits (81), Expect = 3e-36 Identities = 174/205 (84%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||||||||| |||||||| || || || ||||||||||||||||| ||| ||| | Sbjct: 57218 ttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtc 57277 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 | |||||||||||||| || || || ||||||||||||||| ||||| ||||||| ||| Sbjct: 57278 gttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatg 57337 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 ||||||||| ||| || || |||||||||||||||||||| || || ||||| | |||| Sbjct: 57338 gttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagt 57397 Query: 190 acactgaatgcacgtgacttctact 214 ||| ||||| ||||||||||||| Sbjct: 57398 acattgaatattcgtgacttctact 57422 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 |||||||||||||| |||||||||||| |||||||||||| || || || ||||||||| Sbjct: 58497 aaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgta 58556 Query: 604 tttgttggcattgcaatgct 623 ||||| |||||| ||||||| Sbjct: 58557 tttgtgggcatttcaatgct 58576
>emb|AM085512.1| Sorghum bicolor mRNA for autophagy protein 9 (atg9 gene) Length = 3097 Score = 272 bits (137), Expect = 1e-69 Identities = 335/401 (83%) Strand = Plus / Plus Query: 10 ttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagcc 69 |||||||| |||||||||||||| || ||||| || |||||||||||||||||| | | | Sbjct: 544 ttgaaatgcggtgtggaggcactagaatctggggagaaaccatgtgatctgatgaaggtc 603 Query: 70 atcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgatg 129 || |||||| | ||||| || ||||| ||| | || |||||| | ||||||||||| ||| Sbjct: 604 attaagcatgacccattagtccccttcacactgccaaaaatgataactgttggatcaatg 663 Query: 130 gttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaagt 189 || ||| || | | ||||| |||| ||||||||||||||||||||||||||| | |||| Sbjct: 664 gtcataatgacagcttatgggcttaccaacttcctcaagttctttgtacaactcagaagt 723 Query: 190 acactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatccag 249 ||| ||||| ||||||||||||| ||| ||||||||| | |||||||| ||||| ||| Sbjct: 724 acattgaatattcgtgacttctactgtaacagtcttaaggtcacagatctggagattcag 783 Query: 250 acgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaactc 309 || ||||||||||||| | || | |||||||||||||| || || ||||| || |||| Sbjct: 784 actatatcatggcccaaagtagttgagaaggttgtcctcctccagaagtcacaacaactt 843 Query: 310 tgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaat 369 || ||||||| ||| || || ||||||||||||||||||||| ||||| ||||| | ||| Sbjct: 844 tgcgttgttaaggacctttcagagcatgatattatcatgagattaatgcggaaacagaat 903 Query: 370 tacttgatagggatggtgaataaaggcattatctcatttcc 410 ||||| || |||||||| |||||||||||||| ||||||| Sbjct: 904 tacttaattgggatggttaataaaggcattattgcatttcc 944 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagc 543 ||||||||| | ||||| ||| | |||||||||||||| || || || |||||||| || Sbjct: 1018 cttccaaagacgctagagtgggcattaaattggtgcatatttcatagcatgtttgatagt 1077 Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 ||||| ||||| | ||||| |||||| || ||||| ||| |||| ||| ||||||||| Sbjct: 1078 aaattttgtgtcaggaaagactttctaacaggcccatctgttttgacaaagcgacttgta 1137 Query: 604 tttgttggcattgcaatgct 623 ||| | |||||||||||||| Sbjct: 1138 tttatgggcattgcaatgct 1157
>emb|AM085516.1| Zea mays mRNA for autophagy protein 9 (atg9 gene) Length = 2738 Score = 258 bits (130), Expect = 2e-65 Identities = 334/402 (83%) Strand = Plus / Plus Query: 9 cttgaaatgtggtgtggaggcacttgagtctggagaaaaaccatgtgatctgatggaagc 68 ||||||||| ||||||||||||||||||||||| || |||||||||||||| ||| | || Sbjct: 431 cttgaaatgcggtgtggaggcacttgagtctggggagaaaccatgtgatcttatgaaggc 490 Query: 69 catcaagcataatccattggtaccctttacatttcctaaaatggtcactgttggatcgat 128 ||| |||||| ||||||| || ||||| ||||| || |||||| | ||||||||||| || Sbjct: 491 cattaagcatgatccattagttcccttcacattgcccaaaatgataactgttggatcaat 550 Query: 129 ggttatattggtaacatatggacttatcaacttcctcaagttctttgtacaactgaaaag 188 ||| ||| || | | |||||||||| |||||| ||||||||||||||||| | | ||| Sbjct: 551 ggtcataatgacagcttatggacttaccaactttctcaagttctttgtacagttaagaag 610 Query: 189 tacactgaatgcacgtgacttctactataatagtcttaagattacagatctcgagatcca 248 |||||| |||| ||| | ||||||||| | || |||||| | ||||| ||||| || Sbjct: 611 tacactcaatgttcgtcagttctactatgacagacttaagggcaatgatcttgagattca 670 Query: 249 gacgatatcatggcccagaataatcgagaaggttgtcctgctacaaaagtctaaaaaact 308 || ||||||||||||| |||||| |||||||||||||| || || ||||| || |||| Sbjct: 671 aactatatcatggcccaaaataattgagaaggttgtcctcctccagaagtcacaacaact 730 Query: 309 ctgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaagaaaa 368 || ||||||| ||| || || ||||||||||||||||||||| ||||| ||||| | || Sbjct: 731 ttgcgttgttaaggacctttcagagcatgatattatcatgagattaatgcggaaacagaa 790 Query: 369 ttacttgatagggatggtgaataaaggcattatctcatttcc 410 |||||| || |||||||| |||||||||||||| ||||||| Sbjct: 791 ttacttaattgggatggttaataaaggcattattgcatttcc 832 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagc 543 ||||||||| | ||||| ||| | |||||||||||||| || || || |||||||| || Sbjct: 906 cttccaaagacgctagagtgggcattaaattggtgcatatttcatagcatgtttgatagt 965 Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 ||||| ||||| | ||||| |||||| || ||||| ||| |||| ||| ||||||||| Sbjct: 966 aaattttgtgtcaggaaagactttctaacaggcccatctgttttgacaaagcgacttgta 1025 Query: 604 tttgttggcattgcaatgct 623 ||| | |||||||||||||| Sbjct: 1026 tttatgggcattgcaatgct 1045
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 141 bits (71), Expect = 3e-30 Identities = 161/191 (84%) Strand = Plus / Minus Query: 220 agtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaag 279 ||||||||| | |||||||| ||||| ||||| ||||||||||||| | || | |||||| Sbjct: 98801 agtcttaaggtcacagatctggagattcagactatatcatggcccaaagtagttgagaag 98742 Query: 280 gttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatgat 339 |||||||| || || ||||| || |||| || ||||||| ||| || || ||||||||| Sbjct: 98741 gttgtcctcctccagaagtcacaacaactttgcgttgttaaggacctttcagagcatgat 98682 Query: 340 attatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcatt 399 |||||||||||| ||||| ||||| | |||||||| || |||||||| |||||||||||| Sbjct: 98681 attatcatgagattaatgcggaaacagaattacttaattgggatggttaataaaggcatt 98622 Query: 400 atctcatttcc 410 || ||||||| Sbjct: 98621 attgcatttcc 98611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 88/106 (83%) Strand = Plus / Minus Query: 113 tcactgttggatcgatggttatattggtaacatatggacttatcaacttcctcaagttct 172 ||||| ||||||| |||||||||||| ||||||||| |||| || || ||||||||| Sbjct: 98989 tcactattggatcaatggttatattgacgacatatggaattattaatttaatcaagttct 98930 Query: 173 ttgtacaactgaaaagtacactgaatgcacgtgacttctactataa 218 ||||| || ||| ||| | ||| |||| ||||||||||||||||| Sbjct: 98929 ttgtaaaattgagaagcatactcaatgttcgtgacttctactataa 98884 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Minus Query: 559 aaagattttctagcaagcccagctgcattgaaaaaacgacttgtatttgttggcattgca 618 ||||| |||||| || ||||| ||| |||| ||| |||||||||||| | ||||||||| Sbjct: 97766 aaagactttctaacaggcccatctgttttgacaaagcgacttgtatttatgggcattgca 97707 Query: 619 atgct 623 ||||| Sbjct: 97706 atgct 97702 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttga 539 ||||||||| | ||||| ||| | |||||||||||||| || || || |||||||| Sbjct: 98537 cttccaaagacgctagagtgggcattaaattggtgcatatttcatagcatgtttga 98482
>dbj|AK106441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D10, full insert sequence Length = 3119 Score = 133 bits (67), Expect = 8e-28 Identities = 229/283 (80%) Strand = Plus / Plus Query: 166 aagttctttgtacaactgaaaagtacactgaatgcacgtgacttctactataatagtctt 225 ||||| |||||| |||||| ||| ||||| || | ||||||||||||| ||| ||||| Sbjct: 768 aagttttttgtaaaactgagaagcacactcaaggtccgtgacttctactgtaacagtctc 827 Query: 226 aagattacagatctcgagatccagacgatatcatggcccagaataatcgagaaggttgtc 285 ||| ||||||||||||| || ||||| ||||||||||| ||| || | |||||||| || Sbjct: 828 aaggttacagatctcgaaattcagactatatcatggcctagagtagttgagaaggtcgta 887 Query: 286 ctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatgatattatc 345 || || || ||||| || ||| ||||| |||| ||||| ||||||||||||| ||| Sbjct: 888 cttctgcagaagtcacaacgactttgtgtcgttaaagatctcacggagcatgatataatc 947 Query: 346 atgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcattatctca 405 ||| |||||||| | ||| |||| ||| |||| |||||||| |||||||| || ||| || Sbjct: 948 atgcgaataatgcgtaaacaaaactacctgattgggatggttaataaaggtatcatcgca 1007 Query: 406 tttccaattcgtccttggcttcctggtgctggtccaactgtca 448 || ||||| | ||||||||||||| | ||| |||||||||| Sbjct: 1008 ttgccaatcccctcttggcttcctggagttggcccaactgtca 1050 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagc 543 |||||||||||||| || ||||| || ||||||||||||||||| | |||||||| || Sbjct: 1086 cttccaaaggccctggagtggacattgaattggtgcatcttccaaaccatgtttgatagg 1145 Query: 544 aaattctgtgttcgaaaaga 563 ||||| |||||| ||||||| Sbjct: 1146 aaattttgtgttagaaaaga 1165
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 105 bits (53), Expect = 2e-19 Identities = 185/229 (80%) Strand = Plus / Plus Query: 220 agtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaag 279 ||||| ||| ||||||||||||| || ||||| ||||||||||| ||| || | |||||| Sbjct: 128958 agtctcaaggttacagatctcgaaattcagactatatcatggcctagagtagttgagaag 129017 Query: 280 gttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatgat 339 || || || || || ||||| || ||| ||||| |||| ||||| ||||||||||| Sbjct: 129018 gtcgtacttctgcagaagtcacaacgactttgtgtcgttaaagatctcacggagcatgat 129077 Query: 340 attatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcatt 399 || |||||| |||||||| | ||| |||| ||| |||| |||||||| |||||||| || Sbjct: 129078 ataatcatgcgaataatgcgtaaacaaaactacctgattgggatggttaataaaggtatc 129137 Query: 400 atctcatttccaattcgtccttggcttcctggtgctggtccaactgtca 448 ||| |||| ||||| | ||||||||||||| | ||| |||||||||| Sbjct: 129138 atcgcattgccaatcccctcttggcttcctggagttggcccaactgtca 129186 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttcca 527 |||||||||||||| || ||||| || ||||||||||||||||| Sbjct: 129222 cttccaaaggccctggagtggacattgaattggtgcatcttcca 129265
>gb|AC157775.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0064O05, complete sequence Length = 28847 Score = 105 bits (53), Expect = 2e-19 Identities = 185/229 (80%) Strand = Plus / Minus Query: 220 agtcttaagattacagatctcgagatccagacgatatcatggcccagaataatcgagaag 279 ||||| ||| ||||||||||||| || ||||| ||||||||||| ||| || | |||||| Sbjct: 5291 agtctcaaggttacagatctcgaaattcagactatatcatggcctagagtagttgagaag 5232 Query: 280 gttgtcctgctacaaaagtctaaaaaactctgtgttgttagggatctgtcggagcatgat 339 || || || || || ||||| || ||| ||||| |||| ||||| ||||||||||| Sbjct: 5231 gtcgtacttctgcagaagtcacaacgactttgtgtcgttaaagatctcacggagcatgat 5172 Query: 340 attatcatgagaataatgaggaaagaaaattacttgatagggatggtgaataaaggcatt 399 || |||||| |||||||| | ||| |||| ||| |||| |||||||| |||||||| || Sbjct: 5171 ataatcatgcgaataatgcgtaaacaaaactacctgattgggatggttaataaaggtatc 5112 Query: 400 atctcatttccaattcgtccttggcttcctggtgctggtccaactgtca 448 ||| |||| ||||| | ||||||||||||| | ||| |||||||||| Sbjct: 5111 atcgcattgccaatcccctcttggcttcctggagttggcccaactgtca 5063 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttcca 527 |||||||||||||| || ||||| || ||||||||||||||||| Sbjct: 5027 cttccaaaggccctggagtggacattgaattggtgcatcttcca 4984
>emb|AM085513.1| Saccharum officinarum mRNA for autophagy protein 9 (atg9 gene) Length = 3126 Score = 95.6 bits (48), Expect = 2e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 484 cttccaaaggccctagaatggaccttaaattggtgcatcttccagagtatgtttgacagc 543 ||||||||| | ||||| ||| | ||||||||||||||||| || || |||||||| || Sbjct: 1059 cttccaaagacgctagagtgggcattaaattggtgcatctttcatagcatgtttgatagt 1118 Query: 544 aaattctgtgttcgaaaagattttctagcaagcccagctgcattgaaaaaacgacttgta 603 ||||||||||| | ||||| |||||| || ||||| ||| |||| ||| ||||||||| Sbjct: 1119 aaattctgtgtcaggaaagactttctaacaggcccatctgttttgacaaagcgacttgta 1178 Query: 604 tttgttggcattgcaatgct 623 ||| | |||||||||||||| Sbjct: 1179 tttatgggcattgcaatgct 1198 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 304 aaactctgtgttgttagggatctgtcggagcatgatattatcatgagaataatgaggaaa 363 ||||| || ||||||| | |||| || ||||||||||||||||||||| ||||| ||||| Sbjct: 879 aaactttgcgttgttaagtatctttcagagcatgatattatcatgagattaatgcggaaa 938 Query: 364 gaaaattacttgatagggatggtgaataaaggcattatctcatttcc 410 | || ||||| || ||||||| |||||||||||||| ||||||| Sbjct: 939 cagaactacttaattgggatggctaataaaggcattattgcatttcc 985
>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3 Contains part of the gene for HBxAg transactivated protein 2 (XTP2), complete sequence Length = 99886 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 343 atcatgagaataatgaggaaagaa 366 |||||||||||||||||||||||| Sbjct: 10346 atcatgagaataatgaggaaagaa 10369
>ref|NM_126939.1| Arabidopsis thaliana unknown protein AT2G13600 mRNA, complete cds Length = 2094 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cttgagtctggagaaaaacca 51 ||||||||||||||||||||| Sbjct: 1453 cttgagtctggagaaaaacca 1473
>emb|AL591027.12| Human DNA sequence from clone RP11-474J16 on chromosome 6 Contains a CpG island, complete sequence Length = 111635 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 334 catgatattatcatgagaataatgaggaaagaa 366 ||||||||||| ||||||| || |||||||||| Sbjct: 47838 catgatattattatgagaagaaagaggaaagaa 47806
>emb|AL121859.1|SPCP31B10 S.pombe chromosome III p1 p31B10 Length = 21649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 aaaagtctaaaaaactctgtgttgt 317 |||||||||||||||||||| |||| Sbjct: 1315 aaaagtctaaaaaactctgtattgt 1339
>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence Length = 193583 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 atgaggaaagaaaattacttg 375 ||||||||||||||||||||| Sbjct: 20739 atgaggaaagaaaattacttg 20719
>gb|AC007063.6| Arabidopsis thaliana chromosome 2 clone T10F5 map PR1, complete sequence Length = 102585 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 cttgagtctggagaaaaacca 51 ||||||||||||||||||||| Sbjct: 63372 cttgagtctggagaaaaacca 63392
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctgtgttgttagggatctgt 328 ||||||||||||||||||||| Sbjct: 8662226 tctgtgttgttagggatctgt 8662246
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctgtgttgttagggatctgt 328 ||||||||||||||||||||| Sbjct: 4765 tctgtgttgttagggatctgt 4785
>gb|AC024887.22| Homo sapiens 3 BAC RP11-307B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99040 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 573 aagcccagctgcattgaaaaa 593 ||||||||||||||||||||| Sbjct: 69730 aagcccagctgcattgaaaaa 69750
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 cttggcttcctggtgctggtc 439 ||||||||||||||||||||| Sbjct: 2527061 cttggcttcctggtgctggtc 2527081
>emb|AL669945.16| Mouse DNA sequence from clone RP23-260K2 on chromosome X, complete sequence Length = 210523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 atgagaataatgaggaaagaa 366 ||||||||||||||||||||| Sbjct: 92308 atgagaataatgaggaaagaa 92288
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 tctgtgttgttagggatctgt 328 ||||||||||||||||||||| Sbjct: 122669 tctgtgttgttagggatctgt 122689
>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence Length = 167334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 atgaggaaagaaaattacttg 375 ||||||||||||||||||||| Sbjct: 80006 atgaggaaagaaaattacttg 79986
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 catgatattatcatgagaat 353 |||||||||||||||||||| Sbjct: 769691 catgatattatcatgagaat 769672
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 tgaataaaggcattatctca 405 |||||||||||||||||||| Sbjct: 1273142 tgaataaaggcattatctca 1273161
>gb|AC113321.19| Mus musculus chromosome 3, clone RP23-445D13, complete sequence Length = 182156 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggagaaaaaccatgtgatc 58 |||||||||||||||||||| Sbjct: 54150 tggagaaaaaccatgtgatc 54169
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cgatatcatggcccagaata 270 |||||||||||||||||||| Sbjct: 991190 cgatatcatggcccagaata 991171
>ref|XM_632843.1| Dictyostelium discoideum hypothetical protein (DDB0186811), partial mRNA Length = 1113 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tatcaacttcctcaagttct 172 |||||||||||||||||||| Sbjct: 338 tatcaacttcctcaagttct 357
>gb|AE006146.1| Pasteurella multocida subsp. multocida str. Pm70 section 113 of 204 of the complete genome Length = 10734 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acttatcaacttcctcaagt 169 |||||||||||||||||||| Sbjct: 5190 acttatcaacttcctcaagt 5171
>gb|AC116599.3| Mus musculus BAC clone RP24-549N12 from 3, complete sequence Length = 182547 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tggagaaaaaccatgtgatc 58 |||||||||||||||||||| Sbjct: 43189 tggagaaaaaccatgtgatc 43208
>ref|XM_961161.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1315w) partial mRNA Length = 5139 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ctggagaaaaaccatgtgat 57 |||||||||||||||||||| Sbjct: 4241 ctggagaaaaaccatgtgat 4260
>gb|AE004227.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 135 of 251 of the complete chromosome Length = 10177 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gttctttgtacaactgaaaa 187 |||||||||||||||||||| Sbjct: 720 gttctttgtacaactgaaaa 739
>emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on chromosome 13, complete sequence Length = 132436 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaagaaaattacttgatag 379 |||||||||||||||||||| Sbjct: 14394 gaaagaaaattacttgatag 14413
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ctggagaaaaaccatgtgat 57 |||||||||||||||||||| Sbjct: 47955 ctggagaaaaaccatgtgat 47974
>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 3/6 Length = 317511 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 catgatattatcatgagaat 353 |||||||||||||||||||| Sbjct: 68296 catgatattatcatgagaat 68277
>gb|AC107992.3| Homo sapiens chromosome 15, clone RP11-150L8, complete sequence Length = 149015 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaagaaaattacttgatag 379 |||||||||||||||||||| Sbjct: 113905 gaaagaaaattacttgatag 113924
>gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, complete sequence Length = 160151 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cccagctgcattgaaaaaac 595 |||||||||||||||||||| Sbjct: 157396 cccagctgcattgaaaaaac 157415
>gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, complete sequence Length = 142462 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 aataatgaggaaagaaaattactt 374 ||||||||||||||||||| |||| Sbjct: 10841 aataatgaggaaagaaaataactt 10818
>gb|AC022740.4|AC022740 Homo sapiens chromosome 15, clone RP11-617D22, complete sequence Length = 162482 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 gaaagaaaattacttgatag 379 |||||||||||||||||||| Sbjct: 152160 gaaagaaaattacttgatag 152179
>gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OABb-263A1, complete sequence Length = 150582 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 agggatggtgaataaaggca 397 |||||||||||||||||||| Sbjct: 142969 agggatggtgaataaaggca 142988
>gb|AC154452.2| Mus musculus BAC clone RP24-172H10 from 14, complete sequence Length = 135782 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 tgatggaagccatcaagcat 78 |||||||||||||||||||| Sbjct: 103578 tgatggaagccatcaagcat 103559
>emb|AL840625.9| Mouse DNA sequence from clone RP23-343F17 on chromosome 4, complete sequence Length = 164277 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ataatgaggaaagaaaatta 371 |||||||||||||||||||| Sbjct: 128513 ataatgaggaaagaaaatta 128532
>gb|AC127370.3| Mus musculus BAC clone RP23-26H6 from 9, complete sequence Length = 224053 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ccctagaatggaccttaaat 513 |||||||||||||||||||| Sbjct: 98932 ccctagaatggaccttaaat 98913
>emb|AL845263.10| Mouse DNA sequence from clone RP23-337L20 on chromosome 2, complete sequence Length = 209967 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 ctggtgctggtccaactgtcaaat 451 |||||||||||||| ||||||||| Sbjct: 145673 ctggtgctggtccatctgtcaaat 145696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,121,097 Number of Sequences: 3902068 Number of extensions: 6121097 Number of successful extensions: 117436 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117156 Number of HSP's gapped (non-prelim): 276 length of query: 635 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 612 effective length of database: 17,143,297,704 effective search space: 10491698194848 effective search space used: 10491698194848 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)