ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags29i23 |
|---|---|
| Clone Library Name | barley_pub |
>IF1A_WHEAT (P47815) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 222 bits (566), Expect = 6e-58 Identities = 110/127 (86%), Positives = 111/127 (87%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV Sbjct: 17 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDT+RLN YIQFE Sbjct: 77 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLNEGVDVDGPEEGEGDSDYIQFE 136 Query: 516 DEDIDKI 536 DEDIDKI Sbjct: 137 DEDIDKI 143
>IF1A_ONOVI (P56331) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 144 Score = 204 bits (520), Expect = 1e-52 Identities = 102/128 (79%), Positives = 106/128 (82%), Gaps = 1/128 (0%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 EADDDKRELVFKEDGQEYAQV RMLGNGRCEA+C+DGTKRLCHIRGKMHKKVWIAAGDI+ Sbjct: 17 EADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN-XXXXXXXXXXXXXXXXYIQF 512 LVGLRDYQDDKADVILK M DEARLLKAYGELPD RLN YI+F Sbjct: 77 LVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLNEGIGAGGLDEEMDTANDYIEF 136 Query: 513 EDEDIDKI 536 EDEDIDKI Sbjct: 137 EDEDIDKI 144
>IF1AY_PANTR (Q6GVM3) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 162 bits (409), Expect = 1e-39 Identities = 81/127 (63%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEVQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1AY_HUMAN (O14602) Eukaryotic translation initiation factor 1A, Y-chromosomal| (eIF-1A Y isoform) (eIF-4C) Length = 143 Score = 162 bits (409), Expect = 1e-39 Identities = 81/127 (63%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1AX_PONPY (Q5RA42) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 161 bits (408), Expect = 1e-39 Identities = 81/127 (63%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1AX_MOUSE (Q8BMJ3) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 161 bits (408), Expect = 1e-39 Identities = 81/127 (63%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1AX_HUMAN (P47813) Eukaryotic translation initiation factor 1A, X-chromosomal| (eIF-1A X isoform) (eIF-4C) Length = 143 Score = 161 bits (408), Expect = 1e-39 Identities = 81/127 (63%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1A_RAT (Q6VV72) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) (Liver regeneration-related protein LRRG048) Length = 143 Score = 160 bits (404), Expect = 4e-39 Identities = 79/127 (62%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG +RLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 L+GLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1A_MOUSE (Q60872) Eukaryotic translation initiation factor 1A (eIF-1A)| (eIF-4C) Length = 143 Score = 160 bits (404), Expect = 4e-39 Identities = 79/127 (62%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG +RLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 L+GLRDYQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1AH_HUMAN (O75642) Putative eukaryotic translation initiation factor 1A| (eIF-1A) (eIF-4C) Length = 143 Score = 160 bits (404), Expect = 4e-39 Identities = 80/127 (62%), Positives = 92/127 (72%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+C DG KRLCHIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLRDYQD+KADVILKY DEAR L+AYGELP+ ++N I + Sbjct: 77 LVGLRDYQDNKADVILKYNADEARSLQAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1A_RABIT (P47814) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 143 Score = 152 bits (383), Expect = 1e-36 Identities = 78/127 (61%), Positives = 90/127 (70%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E + +KRELVFKEDGQEYAQV +MLGNGR EA+ DG KRL HIRGK+ KKVWI DI+ Sbjct: 17 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDII 76 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLNXXXXXXXXXXXXXXXXYIQFE 515 LVGLR+YQD+KADVILKY DEAR LKAYGELP+ ++N I + Sbjct: 77 LVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDD 136 Query: 516 DEDIDKI 536 DEDID I Sbjct: 137 DEDIDDI 143
>IF1A_YEAST (P38912) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 153 Score = 139 bits (349), Expect = 9e-33 Identities = 62/99 (62%), Positives = 79/99 (79%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 ++D KREL++KE+GQEYAQ+T+MLGNGR EA C DG KR+ HIRGK+ KKVW+ GDI+ Sbjct: 18 DSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDII 77 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN 452 LV LRD+QDD+ DV+ KY DEAR LK GELP+ ++N Sbjct: 78 LVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKIN 116
>IF1A_SCHPO (P55877) Eukaryotic translation initiation factor 1A (EIF-1A)| (EIF-4C) Length = 138 Score = 137 bits (344), Expect = 4e-32 Identities = 64/99 (64%), Positives = 79/99 (79%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E +++KREL + E+GQ YAQVT+MLGNGR EA C DG KRL HIRGK+ KKVWI GDI+ Sbjct: 18 ENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDII 77 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTLRLN 452 L+ LR++QD+K DVILKY DEAR LK GELP+T ++N Sbjct: 78 LLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
>IF1A_SULSO (Q97W62) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 76.3 bits (186), Expect = 7e-14 Identities = 34/80 (42%), Positives = 52/80 (65%) Frame = +3 Query: 174 RELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRD 353 R++ E+GQ V +MLG +C+DG +RL I GK+ KK+W+ GD+VLVG+ D Sbjct: 13 RDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWD 72 Query: 354 YQDDKADVILKYMNDEARLL 413 +Q ++ D++ KY NDE + L Sbjct: 73 FQPNRCDILYKYGNDEIKRL 92
>IF1A1_HALSA (Q9HN64) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 95 Score = 75.1 bits (183), Expect = 2e-13 Identities = 37/87 (42%), Positives = 52/87 (59%) Frame = +3 Query: 171 KRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLR 350 ++ L ED + +A+VT MLG R + C DG +R I G+M K++WI DIVLV Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67 Query: 351 DYQDDKADVILKYMNDEARLLKAYGEL 431 D+QDDKADV +Y +A L+ G + Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>IF1A_METKA (Q8TXZ3) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 73.2 bits (178), Expect = 6e-13 Identities = 35/92 (38%), Positives = 56/92 (60%) Frame = +3 Query: 162 DDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLV 341 D+ +++ ++G+ + V +MLGN R + CVDG R+ I GKM K+VWI GD+VLV Sbjct: 7 DETLKKIRLPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLV 66 Query: 342 GLRDYQDDKADVILKYMNDEARLLKAYGELPD 437 ++Q ++ADV +Y + LK G+L + Sbjct: 67 KPWEFQPERADVTWRYTRVQVDWLKRKGKLDE 98
>IF1A_ARCFU (O29481) Translation initiation factor 1A (aIF-1A)| Length = 97 Score = 71.6 bits (174), Expect = 2e-12 Identities = 36/92 (39%), Positives = 53/92 (57%) Frame = +3 Query: 156 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIV 335 E D + L ++ G+ + VT MLG G + C DG +RL I GKM KK+WI GD+V Sbjct: 4 EDDVIRVRLPDRKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDVV 63 Query: 336 LVGLRDYQDDKADVILKYMNDEARLLKAYGEL 431 +V +Q D+AD++ +Y N + L+ G L Sbjct: 64 IVVPWSFQKDRADIVWRYTNPQVEWLERKGYL 95
>IF1A_PICTO (Q6L2G4) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 69.7 bits (169), Expect = 7e-12 Identities = 33/85 (38%), Positives = 49/85 (57%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 K+ G+ Y V +M G R +C DG R C I GKM K++WI GD+V+V ++QD+K Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEK 76 Query: 369 ADVILKYMNDEARLLKAYGELPDTL 443 D+I +Y +A L LP+ + Sbjct: 77 GDIIYRYTKTQAAYLSRNHMLPEII 101
>IF1A_SULTO (Q974Z9) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 68.9 bits (167), Expect = 1e-11 Identities = 33/81 (40%), Positives = 48/81 (59%) Frame = +3 Query: 174 RELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRD 353 +E+ +G+ V +MLG + IC+DG +RL I GKM KK+W+ GD+VL D Sbjct: 13 KEVPKPAEGEVICVVKKMLGAEHVQVICLDGKERLGRIPGKMKKKMWVKEGDVVLAAPWD 72 Query: 354 YQDDKADVILKYMNDEARLLK 416 +Q +K D+I KY E R L+ Sbjct: 73 FQPNKCDIIYKYSESEVRRLE 93
>IF1A_SULAC (Q4JA54) Translation initiation factor 1A (aIF-1A)| Length = 108 Score = 67.8 bits (164), Expect = 3e-11 Identities = 32/80 (40%), Positives = 46/80 (57%) Frame = +3 Query: 174 RELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRD 353 RE+V +G+ V ++ G + IC DG +RL I GK+ KKVWI GD+VL D Sbjct: 13 REVVKPIEGEVICVVKKLFGGEHVQVICTDGKERLGRIPGKLKKKVWIREGDVVLAAPWD 72 Query: 354 YQDDKADVILKYMNDEARLL 413 +Q +K D++ +Y E R L Sbjct: 73 FQPNKCDIVYRYTESEVRRL 92
>IF1A_PYRAE (Q8ZXV9) Translation initiation factor 1A (aIF-1A)| Length = 114 Score = 65.5 bits (158), Expect = 1e-10 Identities = 28/77 (36%), Positives = 47/77 (61%) Frame = +3 Query: 195 DGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKAD 374 +G+ +V MLG+GR + IC DG R+ + G++ +++W+ AGD V+V L D+ +K D Sbjct: 26 EGEILGKVIEMLGDGRFKVICADGQIRVARLPGRLRRRLWLKAGDYVIVALWDFDREKGD 85 Query: 375 VILKYMNDEARLLKAYG 425 ++ KY + LK G Sbjct: 86 IVHKYEKRDVEELKRRG 102
>IF1A1_METAC (Q8TSA3) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 61.6 bits (148), Expect = 2e-09 Identities = 32/81 (39%), Positives = 46/81 (56%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 +E+ + A V +LG R C+DG R+ I G M KK WI GD+V+V ++Q++K Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEK 88 Query: 369 ADVILKYMNDEARLLKAYGEL 431 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>IF1A2_METAC (Q8TR33) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 105 Score = 61.2 bits (147), Expect = 2e-09 Identities = 33/81 (40%), Positives = 46/81 (56%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 KE+ + A V +LG+ R C+DG R+ I G +KK+WI GD+V+V + QD K Sbjct: 24 KENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDVVIVTPWEIQDTK 83 Query: 369 ADVILKYMNDEARLLKAYGEL 431 ADVI KY + L+ G L Sbjct: 84 ADVIWKYTRPQIEWLERKGYL 104
>IF1A2_METMA (Q8PUJ8) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 106 Score = 60.5 bits (145), Expect = 4e-09 Identities = 33/81 (40%), Positives = 45/81 (55%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 KE+ + A V +LG+ R C+DG R+ I G +KK+WI GDIV+ + QD K Sbjct: 25 KENHEVLATVGSLLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDIVIATPWEIQDSK 84 Query: 369 ADVILKYMNDEARLLKAYGEL 431 ADVI KY + L+ G L Sbjct: 85 ADVIWKYTRPQIEWLERKGYL 105
>IF1A_THEVO (Q979F7) Translation initiation factor 1A (aIF-1A)| Length = 123 Score = 60.1 bits (144), Expect = 5e-09 Identities = 29/85 (34%), Positives = 47/85 (55%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 K+ G+ + V +M G R +C DG R I G+M K++WI D+V+V ++Q +K Sbjct: 35 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 94 Query: 369 ADVILKYMNDEARLLKAYGELPDTL 443 ADV+ +Y +A L LP+ + Sbjct: 95 ADVVYRYTKTQASYLSRNHMLPEVI 119
>IF1A_THEAC (Q03590) Translation initiation factor 1A (aIF-1A)| Length = 119 Score = 60.1 bits (144), Expect = 5e-09 Identities = 29/85 (34%), Positives = 47/85 (55%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 K+ G+ + V +M G R +C DG R I G+M K++WI D+V+V ++Q +K Sbjct: 31 KKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEK 90 Query: 369 ADVILKYMNDEARLLKAYGELPDTL 443 ADV+ +Y +A L LP+ + Sbjct: 91 ADVVYRYTKTQASYLSRNHMLPEVI 115
>IF1A1_METMA (Q8PVF1) Translation initiation factor 1A-1 (aIF-1A-1)| Length = 111 Score = 60.1 bits (144), Expect = 5e-09 Identities = 31/81 (38%), Positives = 45/81 (55%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 +E+ + A V +LG R C+DG R+ I G M KK WI GD+V+ ++Q++K Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEK 88 Query: 369 ADVILKYMNDEARLLKAYGEL 431 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>IF1A_AERPE (P57676) Translation initiation factor 1A (aIF-1A)| Length = 111 Score = 59.7 bits (143), Expect = 7e-09 Identities = 30/85 (35%), Positives = 46/85 (54%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 +++G V R++G G E +C DG + I GKM ++VW+ GD+VL D K Sbjct: 19 EDEGTMLCIVQRVVGAGFLEVLCTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKK 78 Query: 369 ADVILKYMNDEARLLKAYGELPDTL 443 +V+ +Y+ DE R L LP+ L Sbjct: 79 GEVVYRYLRDEVRKLIDMNLLPEEL 103
>IF1A_METTH (O27085) Translation initiation factor 1A (aIF-1A)| Length = 99 Score = 59.3 bits (142), Expect = 9e-09 Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Frame = +3 Query: 216 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DDKADVILKYM 392 V +++G+G+ + C DG RL I GKM K++WI GD+VLV ++Q ++KAD++ +Y Sbjct: 25 VEQIMGHGKLKVRCADGHIRLGRIPGKMKKRIWIREGDVVLVKPWEFQSEEKADIVWRYT 84 Query: 393 NDEARLLKAYGEL 431 E+ L+ G L Sbjct: 85 RTESNWLERKGYL 97
>IF1A3_METAC (Q8TR31) Translation initiation factor 1A-3 (aIF-1A-3)| Length = 110 Score = 58.9 bits (141), Expect = 1e-08 Identities = 30/81 (37%), Positives = 44/81 (54%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK 368 K+ + A V +LG+ R C+DG R+ I G +KK+W+ GD+V+ + QD K Sbjct: 29 KDRNEVLATVASLLGSKRVTLQCMDGVVRMGRIPGSKNKKMWVREGDVVIANPWEIQDSK 88 Query: 369 ADVILKYMNDEARLLKAYGEL 431 ADVI KY + L+ G L Sbjct: 89 ADVIWKYTKPQVDWLERKGYL 109
>IF1A_METJA (Q57887) Translation initiation factor 1A (aIF-1A)| Length = 102 Score = 57.0 bits (136), Expect = 5e-08 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DD 365 KE+ + + +MLG R C+DG RL I G++ ++W+ GD+V+V + Q D Sbjct: 17 KEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQ 76 Query: 366 KADVILKYMNDEARLLKAYGELPDTL 443 K D+I +Y + LK G L + L Sbjct: 77 KCDIIWRYTKTQVEWLKRKGYLDELL 102
>IF1A2_HALSA (Q9HP87) Translation initiation factor 1A-2 (aIF-1A-2)| Length = 94 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/90 (33%), Positives = 47/90 (52%) Frame = +3 Query: 162 DDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLV 341 + +R L D + +A V R G C DG +R+ I G+M + WI GD+VL Sbjct: 4 ESGRRNLRMPNDDEVFAVVKRHDGGNHVTLQCEDGKERMGRIPGRMKYRTWINEGDVVLA 63 Query: 342 GLRDYQDDKADVILKYMNDEARLLKAYGEL 431 D+QD+KA+V +Y + +A L+ G + Sbjct: 64 EPWDWQDEKANVEWRYSDQDADQLREEGHI 93
>IF1A_PYRAB (Q9V138) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 53.1 bits (126), Expect = 7e-07 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Frame = +3 Query: 165 DDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVG 344 D+ + E Q + V + LG G + C DG R C I GK+ ++VWI GD+V+V Sbjct: 13 DEVIRVPLPEGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVQ 72 Query: 345 LRDYQDDK-ADVILKYMNDEARLLKAYGEL 431 Q DK D++ +Y + L G++ Sbjct: 73 PWPVQSDKRGDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRHO (O59280) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 52.8 bits (125), Expect = 9e-07 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = +3 Query: 192 EDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK- 368 E Q + V + LG G + C DG R C I GK+ ++VWI GD+V+V Q DK Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVQPWPVQSDKR 81 Query: 369 ADVILKYMNDEARLLKAYGEL 431 D++ +Y + L G++ Sbjct: 82 GDIVYRYTQTQVDWLLRKGKI 102
>IF1A_PYRFU (Q8U0K5) Translation initiation factor 1A (aIF-1A)| Length = 115 Score = 52.8 bits (125), Expect = 9e-07 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%) Frame = +3 Query: 192 EDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDK- 368 E Q + V + LG G + C DG R C I G++ ++VWI GD+V+V Q DK Sbjct: 22 EGNQLFGVVEQALGAGWMDVRCEDGKVRRCRIPGRLRRRVWIKVGDLVIVEPWPVQSDKR 81 Query: 369 ADVILKYMNDEARLLKAYGEL 431 D++ +Y + L G++ Sbjct: 82 GDIVYRYTQTQVEWLLRKGKI 102
>IF1A_PYRKO (Q5JH78) Translation initiation factor 1A (aIF-1A)| Length = 117 Score = 51.2 bits (121), Expect = 3e-06 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 189 KEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DD 365 + GQ + + + LG G + C DG R C I GK+ +++W+ GD+V+V Q D+ Sbjct: 24 RSKGQLFGVIEQALGAGWMDVRCEDGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPVQSDE 83 Query: 366 KADVILKYMNDEARLLKAYGEL 431 + D++ +Y + L G++ Sbjct: 84 RGDIVYRYTRTQVDWLLRKGKI 105
>IF1A_METMP (Q6LZM1) Translation initiation factor 1A (aIF-1A)| Length = 104 Score = 50.4 bits (119), Expect = 4e-06 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = +3 Query: 216 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQ-DDKADVILKYM 392 + +MLG R C+DG R+ I GK+ +K+W+ D+V+V + Q D+K DVI +Y Sbjct: 28 IEQMLGASRVRVRCMDGKLRMGRIPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYT 87 Query: 393 NDEARLLKAYGEL 431 + L G L Sbjct: 88 KGQVDWLNRKGYL 100
>IF1C_PSEAK (Q3ZJ80) Translation initiation factor IF-1, chloroplast| Length = 109 Score = 33.5 bits (75), Expect = 0.55 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Frame = +3 Query: 216 VTRMLGNGRCEAICVDGTKRLCHIRGKMHKK-VWIAAGDIVLVGLRDYQDDKADVILKYM 392 +T+ L NG +G K + HI GK+ + + I GD V+V L Y + +I + Sbjct: 34 ITQCLSNGMFRVKLENGFKVIAHISGKIRRNFIRILLGDSVIVELSPYDLTRGRIIYR-- 91 Query: 393 NDEARLLKAYGELPDTLRLN 452 LK +TLR N Sbjct: 92 ------LKPTNSSTETLRFN 105
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +2 Query: 539 SFFFSSPR---LASPLYFLFYSVLIACARP 619 SFFF+ PR LASPL FLF+S I A P Sbjct: 406 SFFFAIPRVIFLASPLAFLFFSQNIIAASP 435
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = +3 Query: 3 RHRSPSRSKTEGFVQLRRREPSKANPPQSRPTPAMP 110 R RSPS T RRR PS A PP+ R TP P Sbjct: 560 RRRSPSPPPTR-----RRRSPSPAPPPRRRRTPTPP 590
>ASD4_NEUCR (Q9HEV5) GATA type zinc finger protein Asd4 (Ascus development| protein 4) Length = 426 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 Query: 2 PPPLPISI*NRGFRPAPSPRAEQSQPTPEPTHPSHA 109 P P P+S PAP+P A+ P P P P A Sbjct: 362 PEPAPVSEPTEASAPAPAPEADSVVPEPTPAAPESA 397
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.0 bits (71), Expect = 1.6 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = +3 Query: 3 RHRSPSRSKTEGFVQLRRREPSKANPPQSRPTPAMP 110 R RSPS T RRR PS A PP+ R TP P Sbjct: 546 RRRSPSPPPTR-----RRRSPSPAPPPRRRRTPTPP 576
>PRIM_BPT7 (P03692) DNA primase/helicase (EC 2.7.7.-)| Length = 566 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 234 NGRCEAICVDG-TKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARL 410 NGR A+ G +K C G WIA D V+ + DY+D +++ + + D+ + Sbjct: 75 NGRYSALTARGISKETCQKAG-----YWIAKVDGVMYQVADYRDQNGNIVSQKVRDKDKN 129 Query: 411 LKAYG 425 K G Sbjct: 130 FKTTG 134
>IF1_MYCH2 (Q601J2) Translation initiation factor IF-1| Length = 75 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +3 Query: 213 QVTRMLGNGRCEAICVDGTKRLCHIRGKMH-KKVWIAAGDIVLVGLRDYQDDKADVILKY 389 +VT + E +G K CHI GKM + I GD+V V + Y K ++ ++ Sbjct: 15 KVTHVFNAQEYEVTLENGIKLNCHIAGKMKIHHIKIIIGDMVKVEISPYDLSKGRIVYRF 74
>SLAPO_BREBE (P09333) Outer cell wall protein precursor (OWP)| Length = 1004 Score = 30.8 bits (68), Expect = 3.6 Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 6/112 (5%) Frame = +3 Query: 60 EPSKANPPQSRP---TPAMPXXXXXXXXXXXXXXXEADDDKRELVFKEDGQE---YAQVT 221 EP KA S P P + AD D + +V K+DG+E YA T Sbjct: 818 EPQKAIDGVSAPDKEAPVVTGVEAGKTYNTAVTPDSADKDIKTVVLKKDGKELAGYALKT 877 Query: 222 RMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADV 377 + NG E + D ++ KV I A D ++ DDK V Sbjct: 878 PISENGSYELVVTDNAGNTTTVK----FKVDIPAEDKKAPEIKTVTDDKVAV 925
>SETBP_MOUSE (Q9Z180) SET-binding protein (SEB)| Length = 1535 Score = 30.8 bits (68), Expect = 3.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 2 PPPLPISI*NRGFRPAPSPRAEQSQPTPEP 91 PPPLP + + P P A+ +QPTP+P Sbjct: 1482 PPPLPKTARGGKRKHRPQPPAQPAQPTPQP 1511
>RP3A_RAT (P47709) Rabphilin-3A (Exophilin-1)| Length = 684 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +2 Query: 2 PPPLPISI*NRGFRPAPSPRAEQSQPTPEPTHPSHA 109 P P+PI + +PA P A Q QPTPE HP+ A Sbjct: 164 PQPMPIKK-TKPQQPAGEP-ATQEQPTPESRHPARA 197
>RP3A_MOUSE (P47708) Rabphilin-3A (Exophilin-1)| Length = 681 Score = 30.8 bits (68), Expect = 3.6 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +2 Query: 2 PPPLPISI*NRGFRPAPSPRAEQSQPTPEPTHPSHA 109 P P+PI + +PA P A Q QPTPE HP+ A Sbjct: 164 PQPMPIKK-TKPQQPAGEP-ATQEQPTPESRHPARA 197
>TYSY_SHEON (Q8EH94) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +3 Query: 267 TKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYG 425 T + CH+R +H+ +W GD + LR D+K + ++ ++ L YG Sbjct: 46 TTKKCHMRSIIHELLWFLKGDTNIAYLR---DNKVSIWDEWADENGDLGPVYG 95
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = +2 Query: 539 SFFFSSPR---LASPLYFLFYSVLIACARP 619 SFFF+ PR LASPL FLF+ I A P Sbjct: 406 SFFFAIPRVIFLASPLAFLFFGQNIIAASP 435
>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 4) (Class-IV chitin synthase 4) Length = 1195 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%) Frame = +2 Query: 44 PAPSPRAEQSQ--PTPEPTHPS 103 P+P+P E+ PTPEP HPS Sbjct: 23 PSPNPNVERDPLAPTPEPAHPS 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,993,438 Number of Sequences: 219361 Number of extensions: 981105 Number of successful extensions: 4679 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4624 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
