Clone Name | bags32j15 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_183451.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1771 Score = 484 bits (244), Expect = e-133 Identities = 413/468 (88%), Gaps = 1/468 (0%) Strand = Plus / Plus Query: 59 tcggcatccaaagggaactggcagctgagactatctacaaggagagatgcattgctgtag 118 ||||||||||||||||| |||||||||| || || |||| |||||||||||| |||||| Sbjct: 662 tcggcatccaaagggaaatggcagctgaaaccatatacagggagagatgcatagctgtaa 721 Query: 119 acgatggagatagttgggccaagtacatgtcgatttctggttctgtggaggatgaacatg 178 || |||||||||||||||||||||||||||| | |||||||| | ||||| || || Sbjct: 722 acaatggagatagttgggccaagtacatgtctgtctctggttccgcagaggacgagcaca 781 Query: 179 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 238 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 782 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 841 Query: 239 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 298 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 842 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 901 Query: 299 gagaagtttttgtggtgcaagcacatggcactgatgcgatggttgatgaggataactgcg 358 ||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| | Sbjct: 902 gagaagtttatgtggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtg 961 Query: 359 tgttcttcctcccgcacctccctagaggagaagtctgtgatgtgcccatctttctattca 418 |||||||||| || |||| ||||||||||||| | || || ||| || ||||| |||| Sbjct: 962 tgttcttcctaccacaccgccctagaggagaaatttgcgagccgccgatttttcttttca 1021 Query: 419 tgaagggaacagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccg 478 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| | Sbjct: 1022 tgaagggaacagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactg 1081 Query: 479 tcctccagcatgttactccagacaaggcagcttgttgtactttgagga 526 |||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 1082 tcctccagaatgttactccagacaaggcagc-tgttgtactttgagga 1128 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 1167 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 1226 Query: 618 tgcccaaga 626 ||||||||| Sbjct: 1227 tgcccaaga 1235
>dbj|AK100002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E13, full insert sequence Length = 1771 Score = 484 bits (244), Expect = e-133 Identities = 413/468 (88%), Gaps = 1/468 (0%) Strand = Plus / Plus Query: 59 tcggcatccaaagggaactggcagctgagactatctacaaggagagatgcattgctgtag 118 ||||||||||||||||| |||||||||| || || |||| |||||||||||| |||||| Sbjct: 662 tcggcatccaaagggaaatggcagctgaaaccatatacagggagagatgcatagctgtaa 721 Query: 119 acgatggagatagttgggccaagtacatgtcgatttctggttctgtggaggatgaacatg 178 || |||||||||||||||||||||||||||| | |||||||| | ||||| || || Sbjct: 722 acaatggagatagttgggccaagtacatgtctgtctctggttccgcagaggacgagcaca 781 Query: 179 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 238 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 782 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 841 Query: 239 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 298 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 842 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 901 Query: 299 gagaagtttttgtggtgcaagcacatggcactgatgcgatggttgatgaggataactgcg 358 ||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| | Sbjct: 902 gagaagtttatgtggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtg 961 Query: 359 tgttcttcctcccgcacctccctagaggagaagtctgtgatgtgcccatctttctattca 418 |||||||||| || |||| ||||||||||||| | || || ||| || ||||| |||| Sbjct: 962 tgttcttcctaccacaccgccctagaggagaaatttgcgagccgccgatttttcttttca 1021 Query: 419 tgaagggaacagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccg 478 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| | Sbjct: 1022 tgaagggaacagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactg 1081 Query: 479 tcctccagcatgttactccagacaaggcagcttgttgtactttgagga 526 |||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 1082 tcctccagaatgttactccagacaaggcagc-tgttgtactttgagga 1128 Score = 42.1 bits (21), Expect = 2.2 Identities = 57/69 (82%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 1167 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 1226 Query: 618 tgcccaaga 626 |||| |||| Sbjct: 1227 tgccaaaga 1235
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Plus Query: 70 agggaactggcagctgagactatctacaaggagagatgcattgctgtagacgatggagat 129 |||||| |||||||||| || || |||| |||||||||||| |||||| || |||||||| Sbjct: 142189 agggaaatggcagctgaaaccatatacagggagagatgcatagctgtaaacaatggagat 142248 Query: 130 agttgggccaagtacatgtcgatttctggttctgtggaggatgaacatgacataatcacc 189 |||||||||||||||||||| | |||||||| | ||||| || || |||||||||| Sbjct: 142249 agttgggccaagtacatgtctgtctctggttccgcagaggacgagcacaacataatcact 142308 Query: 190 ctgcagtacacagaggagggcttactgaccatcgatgagaacagggatgggcgtgcggct 249 ||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| || Sbjct: 142309 ctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatggccatgctgca 142368 Query: 250 gcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaagagagaagttttt 309 || ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| | Sbjct: 142369 gcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaagagagaagtttat 142428 Query: 310 gtggt 314 ||||| Sbjct: 142429 gtggt 142433 Score = 133 bits (67), Expect = 8e-28 Identities = 92/99 (92%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 428 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 487 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 142814 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 142873 Query: 488 atgttactccagacaaggcagcttgttgtactttgagga 526 |||||||||||||||||||||| |||||||||||||||| Sbjct: 142874 atgttactccagacaaggcagc-tgttgtactttgagga 142911 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 312 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 371 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 142562 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 142621 Query: 372 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 430 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 142622 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 142680 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 142950 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 143009 Query: 618 tgcccaaga 626 ||||||||| Sbjct: 143010 tgcccaaga 143018
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Plus Query: 70 agggaactggcagctgagactatctacaaggagagatgcattgctgtagacgatggagat 129 |||||| |||||||||| || || |||| |||||||||||| |||||| || |||||||| Sbjct: 139991 agggaaatggcagctgaaaccatatacagggagagatgcatagctgtaaacaatggagat 140050 Query: 130 agttgggccaagtacatgtcgatttctggttctgtggaggatgaacatgacataatcacc 189 |||||||||||||||||||| | |||||||| | ||||| || || |||||||||| Sbjct: 140051 agttgggccaagtacatgtctgtctctggttccgcagaggacgagcacaacataatcact 140110 Query: 190 ctgcagtacacagaggagggcttactgaccatcgatgagaacagggatgggcgtgcggct 249 ||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| || Sbjct: 140111 ctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatggccatgctgca 140170 Query: 250 gcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaagagagaagttttt 309 || ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| | Sbjct: 140171 gcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaagagagaagtttat 140230 Query: 310 gtggt 314 ||||| Sbjct: 140231 gtggt 140235 Score = 133 bits (67), Expect = 8e-28 Identities = 92/99 (92%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 428 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 487 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 140616 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 140675 Query: 488 atgttactccagacaaggcagcttgttgtactttgagga 526 |||||||||||||||||||||| |||||||||||||||| Sbjct: 140676 atgttactccagacaaggcagc-tgttgtactttgagga 140713 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 312 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 371 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 140364 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 140423 Query: 372 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 430 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 140424 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 140482 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 140752 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 140811 Query: 618 tgcccaaga 626 ||||||||| Sbjct: 140812 tgcccaaga 140820
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Plus Query: 70 agggaactggcagctgagactatctacaaggagagatgcattgctgtagacgatggagat 129 |||||| |||||||||| || || |||| |||||||||||| |||||| || |||||||| Sbjct: 90735 agggaaatggcagctgaaaccatatacagggagagatgcatagctgtaaacaatggagat 90794 Query: 130 agttgggccaagtacatgtcgatttctggttctgtggaggatgaacatgacataatcacc 189 |||||||||||||||||||| | |||||||| | ||||| || || |||||||||| Sbjct: 90795 agttgggccaagtacatgtctgtctctggttccgcagaggacgagcacaacataatcact 90854 Query: 190 ctgcagtacacagaggagggcttactgaccatcgatgagaacagggatgggcgtgcggct 249 ||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| || Sbjct: 90855 ctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatggccatgctgca 90914 Query: 250 gcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaagagagaagttttt 309 || ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| | Sbjct: 90915 gcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaagagagaagtttat 90974 Query: 310 gtggt 314 ||||| Sbjct: 90975 gtggt 90979 Score = 133 bits (67), Expect = 8e-28 Identities = 92/99 (92%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 428 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 487 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 91360 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 91419 Query: 488 atgttactccagacaaggcagcttgttgtactttgagga 526 |||||||||||||||||||||| |||||||||||||||| Sbjct: 91420 atgttactccagacaaggcagc-tgttgtactttgagga 91457 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 312 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 371 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 91108 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 91167 Query: 372 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 430 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 91168 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 91226 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 91496 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 91555 Query: 618 tgcccaaga 626 ||||||||| Sbjct: 91556 tgcccaaga 91564
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 248 bits (125), Expect = 2e-62 Identities = 215/245 (87%) Strand = Plus / Plus Query: 70 agggaactggcagctgagactatctacaaggagagatgcattgctgtagacgatggagat 129 |||||| |||||||||| || || |||| |||||||||||| |||||| || |||||||| Sbjct: 127119 agggaaatggcagctgaaaccatatacagggagagatgcatagctgtaaacaatggagat 127178 Query: 130 agttgggccaagtacatgtcgatttctggttctgtggaggatgaacatgacataatcacc 189 |||||||||||||||||||| | |||||||| | ||||| || || |||||||||| Sbjct: 127179 agttgggccaagtacatgtctgtctctggttccgcagaggacgagcacaacataatcact 127238 Query: 190 ctgcagtacacagaggagggcttactgaccatcgatgagaacagggatgggcgtgcggct 249 ||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||| || Sbjct: 127239 ctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatggccatgctgca 127298 Query: 250 gcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaagagagaagttttt 309 || ||||||||||||||||| ||||||||||| || |||||||||||||||||||||| | Sbjct: 127299 gcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaagagagaagtttat 127358 Query: 310 gtggt 314 ||||| Sbjct: 127359 gtggt 127363 Score = 133 bits (67), Expect = 8e-28 Identities = 92/99 (92%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 428 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 487 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 127744 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 127803 Query: 488 atgttactccagacaaggcagcttgttgtactttgagga 526 |||||||||||||||||||||| |||||||||||||||| Sbjct: 127804 atgttactccagacaaggcagc-tgttgtactttgagga 127841 Score = 93.7 bits (47), Expect = 7e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 312 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 371 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 127492 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 127551 Query: 372 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 430 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 127552 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 127610 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Plus Query: 558 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 617 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 127880 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 127939 Query: 618 tgcccaaga 626 ||||||||| Sbjct: 127940 tgcccaaga 127948
>ref|NM_121313.3| Arabidopsis thaliana unknown protein AT5G13100 mRNA, complete cds Length = 1495 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 895 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 954 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 955 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 1014 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 1015 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1074 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1075 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1134 Query: 463 ccattgat 470 || ||||| Sbjct: 1135 cccttgat 1142
>gb|BT020363.1| Arabidopsis thaliana At5g13100 gene, complete cds Length = 1065 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 766 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 825 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 826 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 885 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 886 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 945 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 946 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1005 Query: 463 ccattgat 470 || ||||| Sbjct: 1006 cccttgat 1013
>gb|AY058168.1| Arabidopsis thaliana AT5g13100/T19L5_60 mRNA, complete cds Length = 1479 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 879 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 938 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 939 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 998 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 999 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1058 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1059 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1118 Query: 463 ccattgat 470 || ||||| Sbjct: 1119 cccttgat 1126
>emb|BX830714.1|CNS0A1NX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 869 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 928 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 929 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 988 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 989 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1048 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1049 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1108 Query: 463 ccattgat 470 || ||||| Sbjct: 1109 cccttgat 1116
>emb|BX829394.1|CNS0A04Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1421 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 862 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 921 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 922 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 981 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 982 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1041 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1042 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1101 Query: 463 ccattgat 470 || ||||| Sbjct: 1102 cccttgat 1109
>emb|BX829632.1|CNS09ZZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1360 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 825 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 884 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 885 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 944 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 945 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1004 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1005 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1064 Query: 463 ccattgat 470 || ||||| Sbjct: 1065 cccttgat 1072
>emb|BX830955.1|CNS09ZJC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1423 Score = 79.8 bits (40), Expect = 1e-11 Identities = 196/248 (79%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 862 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 921 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 922 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 981 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 982 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1041 Query: 403 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 462 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1042 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1101 Query: 463 ccattgat 470 || ||||| Sbjct: 1102 cccttgat 1109
>emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 815 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatcgcaatcgagtgtcta 874 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| |||||| | |||| |||||| Sbjct: 875 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggctcagatgggatggta 934 Query: 343 gatgaggataactgcgtgttctt 365 || || || ||||| |||||||| Sbjct: 935 gaggaagagaactgtgtgttctt 957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 407 tctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgagccat 466 |||||||||||||||| || || | |||||||||| ||| || |||||||||||||| | Sbjct: 1000 tctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgagccct 1059 Query: 467 tgat 470 |||| Sbjct: 1060 tgat 1063
>emb|BX832255.1|CNS09ZVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 73.8 bits (37), Expect = 6e-10 Identities = 197/249 (79%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 852 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 911 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 912 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 971 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 972 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1031 Query: 403 cccatctttctattcatgaagggaacagcatggt-gtggtgctggtgcggaccattacga 461 || |||||||||||||||| ||||| | |||| |||||| ||| || ||||||||||| Sbjct: 1032 ccagtctttctattcatgaaaggaactggttggtcgtggtggtggagcagaccattacga 1091 Query: 462 gccattgat 470 ||| ||||| Sbjct: 1092 gcccttgat 1100
>emb|BX832168.1|CNS09ZMD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 73.8 bits (37), Expect = 6e-10 Identities = 197/249 (79%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 816 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 875 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 876 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 935 Query: 343 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 402 || || || ||||| |||||||||| ||| ||| ||| | | | ||||| ||| || Sbjct: 936 gaggaagagaactgtgtgttcttccccccccacaacccaacaagtgaagttcttgaagtc 995 Query: 403 cccatctttctattcatgaagggaacagcatggt-gtggtgctggtgcggaccattacga 461 || |||||||||||||||| || || | |||| |||||| ||| || ||||||||||| Sbjct: 996 ccagtctttctattcatgaaaggcactggttggtcgtggtggtggagcagaccattacga 1055 Query: 462 gccattgat 470 ||| ||||| Sbjct: 1056 gcccttgat 1064
>emb|BX832139.1|CNS09ZOS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 895 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 954 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 955 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 1014 Query: 343 gatgaggataactgcgtgttctt 365 || || || ||||| |||||||| Sbjct: 1015 gaggaagagaactgtgtgttctt 1037
>gb|AY089155.1| Arabidopsis thaliana clone 39563 mRNA, complete sequence Length = 1396 Score = 67.9 bits (34), Expect = 4e-08 Identities = 118/146 (80%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 823 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 882 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 342 ||||| |||||||| || || | | |||||||||||| ||||| | |||| |||||| Sbjct: 883 gccactgagttcaaacgaaaaatctatgtggtgcaagcgcatggatcagatgggatggta 942 Query: 343 gatgaggataactgcgtgttcttcct 368 || || || ||||| ||||||||||| Sbjct: 943 gaggaagagaactgtgtgttcttcct 968
>emb|BX832403.1|CNS09ZNV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 857 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 916 Query: 283 gccaccgagttcaagagagaagtttttgtggtgcaagcacatgg 326 ||||| |||||||| ||||| | | ||||||| |||| ||||| Sbjct: 917 gccactgagttcaaacgagaaatctatgtggtgaaagcgcatgg 960
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 223 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 282 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 31075 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 31134 Query: 283 gccaccgagttcaa 296 ||||| |||||||| Sbjct: 31135 gccactgagttcaa 31148 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 433 tggtgtggtgctggtgcggaccattacgagccattgat 470 |||||||||| ||| || |||||||||||||| ||||| Sbjct: 31472 tggtgtggtggtggagcagaccattacgagcccttgat 31509
>emb|BX830344.1|CNS0A07W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1427 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 407 tctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgagc 463 |||||||||||||||| ||||| | |||||||||| ||| || |||||| |||||| Sbjct: 1048 tctttctattcatgaaaggaactggttggtgtggtggtggagcagaccatcacgagc 1104
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 ttctggttctgtggaggatgaa 174 |||||||||||||||||||||| Sbjct: 465411 ttctggttctgtggaggatgaa 465432
>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence Length = 240447 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 153 ttctggttctgtggaggatgaa 174 |||||||||||||||||||||| Sbjct: 142134 ttctggttctgtggaggatgaa 142155
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgactccctcgacgccgccgtc 43 |||||||||||||||||||||| Sbjct: 7007359 cgactccctcgacgccgccgtc 7007338 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 cgactccctcgacgccgccgtccg 45 ||||||||||| |||||||||||| Sbjct: 5394557 cgactccctcgtcgccgccgtccg 5394534
>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence Length = 192274 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 424 ggaacagcatggtgtggtgctg 445 |||||||||||||||||||||| Sbjct: 86791 ggaacagcatggtgtggtgctg 86770
>emb|AM075208.1| Enterobacter sakazakii partial genome, BAC clone 10 C 10 Length = 86823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 gctgcgtttggtgatgatatt 267 ||||||||||||||||||||| Sbjct: 45535 gctgcgtttggtgatgatatt 45555
>emb|CR728004.2|CNS0GOOA Tetraodon nigroviridis full-length cDNA Length = 1404 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 tgtggtgcaagcacatggcac 329 ||||||||||||||||||||| Sbjct: 999 tgtggtgcaagcacatggcac 1019
>gb|AY738618.1| Haloferax volcanii DS2 DnaK chaperone system gene cluster, complete sequence; and conserved hypothetical protein gene, complete cds Length = 7680 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 270 catcgagtgcctcgccaccgagttc 294 ||||||||| ||||||||||||||| Sbjct: 3992 catcgagtggctcgccaccgagttc 4016
>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 216677 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ttctattcatgaagggaaca 429 |||||||||||||||||||| Sbjct: 124820 ttctattcatgaagggaaca 124839
>gb|AY813544.1| Schistosoma japonicum SJCHGC05862 protein mRNA, complete cds Length = 1884 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 agaagtctgtgatgtgcccatctt 410 ||||||||||||| |||||||||| Sbjct: 1116 agaagtctgtgatctgcccatctt 1093
>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence Length = 175079 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ccctagaggagaagtctgtg 397 |||||||||||||||||||| Sbjct: 21944 ccctagaggagaagtctgtg 21925
>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ttctattcatgaagggaaca 429 |||||||||||||||||||| Sbjct: 221761 ttctattcatgaagggaaca 221780
>gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-470F15, complete sequence Length = 177104 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tctttctattcatgaaggga 426 |||||||||||||||||||| Sbjct: 125045 tctttctattcatgaaggga 125064
>gb|AC008859.5| Homo sapiens chromosome 5 clone CTD-2183N12, complete sequence Length = 120491 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 ccctagaggagaagtctgtg 397 |||||||||||||||||||| Sbjct: 455 ccctagaggagaagtctgtg 474
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgactccctcgacgccgccg 41 |||||||||||||||||||| Sbjct: 2839823 cgactccctcgacgccgccg 2839804
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cgactccctcgacgccgccg 41 |||||||||||||||||||| Sbjct: 83304 cgactccctcgacgccgccg 83285
>emb|AL831706.19| Mouse DNA sequence from clone RP23-74B12 on chromosome 2, complete sequence Length = 193178 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gtgttcttcctcccgcacctccct 381 |||||||||||||| ||||||||| Sbjct: 180016 gtgttcttcctcccccacctccct 180039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,359,863 Number of Sequences: 3902068 Number of extensions: 5359863 Number of successful extensions: 95738 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95458 Number of HSP's gapped (non-prelim): 259 length of query: 626 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 603 effective length of database: 17,143,297,704 effective search space: 10337408515512 effective search space used: 10337408515512 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)