ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags32j15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR... 40 0.007
2CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR... 40 0.007
3YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 34 0.40
4AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor 32 1.2
5SP96_DICDI (P14328) Spore coat protein SP96 32 2.0
6VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antige... 31 2.6
7VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antige... 31 2.6
8LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7... 30 4.5
9Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1 30 5.8
10YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P... 30 5.8
11IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 s... 30 5.8
12LY75_MOUSE (Q60767) Lymphocyte antigen 75 precursor (DEC-205) (C... 30 5.8
13WSC3_YEAST (Q12215) Cell wall integrity and stress response comp... 29 10.0
14HRH1_CAVPO (P31389) Histamine H1 receptor 29 10.0

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 33/104 (31%), Positives = 39/104 (37%)
 Frame = -2

Query: 352 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 173
           YPHQ  H  H   PQ        +     +H  +  HAHP  H+ S  PPL T       
Sbjct: 290 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGN----- 339

Query: 172 HPPQNQKSTCTWPNYLHRLQQCISPCR*SQLPVPFGCRFRRAPD 41
              Q Q S  T         Q + P +  Q P P G R RR  D
Sbjct: 340 ---QAQVSPAT---------QQMQPTQTIQPPQPTGGRRRRVVD 371



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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 33/104 (31%), Positives = 39/104 (37%)
 Frame = -2

Query: 352 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 173
           YPHQ  H  H   PQ        +     +H  +  HAHP  H+ S  PPL T       
Sbjct: 135 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGN----- 184

Query: 172 HPPQNQKSTCTWPNYLHRLQQCISPCR*SQLPVPFGCRFRRAPD 41
              Q Q S  T         Q + P +  Q P P G R RR  D
Sbjct: 185 ---QAQVSPAT---------QQMQPTQTIQPPQPTGGRRRRVVD 216



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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
 Frame = -1

Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 222
           +S +S        ++  SSS+ +SVP   +T +S  +S    S + SS ++++RPS  SS
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSS----SSSSSSSSSSSRPSSSSS 239

Query: 221 MV-SKPSSVYCRVI----MSCSSSTEPEIDMYLAQLSPSSTA 111
            + +  SS +   +     S SSST  E+        PSSTA
Sbjct: 240 FITTMSSSTFISTVTVTPSSSSSSTSSEV--------PSSTA 273



 Score = 29.3 bits (64), Expect = 10.0
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = -1

Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 222
           +S +SP        T  SSS+ +S   + ++ +S  +S +  S + SS ++++  S  SS
Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198

Query: 221 MVSKPSSVYCRVIMSCSSS 165
             S  SS    +  S SSS
Sbjct: 199 SSSSSSSSSVPITSSTSSS 217



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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
 Frame = -1

Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLN------SVARHSMAISSPNAAAR 240
           TS +S        +T  SSS+ ++ P + +T +SL +      S ++ S + SS + +  
Sbjct: 203 TSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTS 262

Query: 239 PSLFS----SMVSKPS----SVYCRVIMSCSSSTEPEI---DMYLAQLSPSSTAM 108
           PS  S    S  + PS    S       S S+ST P +      LA  SPSST++
Sbjct: 263 PSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSI 317



 Score = 30.8 bits (68), Expect = 3.4
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = -1

Query: 350 SSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSSMVSKPSSV-----YCRV 186
           SSST+ +   + T+K +       H+ AISS +     ++ SS   +PSS          
Sbjct: 113 SSSTLPTTTLSVTSKFTSYICPTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISPVTST 172

Query: 185 IMSCSSSTEPEIDMYLAQLSPSSTA 111
           + S +SS      +     SPSST+
Sbjct: 173 LSSTTSSNPTTTSLSSTSTSPSSTS 197



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>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
 Frame = -1

Query: 401 TSQTSPLGRCGRKNTQ----LSSSTIASVPCACTTKTSLLNSVARHSMAISSPN---AAA 243
           TS +S LG     +      +SSS   S   + +  +S  +S    S A SSP+   A++
Sbjct: 426 TSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASS 485

Query: 242 RPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTA 111
            PS  +S  S PSS       S SSS+ P      +  +PSS+A
Sbjct: 486 SPSSSASSSSSPSS-------SASSSSAPS-SSASSSSAPSSSA 521



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>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)|
          Length = 886

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/116 (23%), Positives = 48/116 (41%)
 Frame = -1

Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273
           + P P+   P +      + T+     G  +T + +S   +   A TT    + S +  S
Sbjct: 584 TTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSS 643

Query: 272 MAISSPNAAARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAMH 105
           M++       RPS  S  +S  +S      M   +S  P     + Q++P+ST+ H
Sbjct: 644 MSL-------RPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTH 692



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>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)|
          Length = 886

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/116 (23%), Positives = 48/116 (41%)
 Frame = -1

Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273
           + P P+   P +      + T+     G  +T + +S   +   A TT    + S +  S
Sbjct: 584 TTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSS 643

Query: 272 MAISSPNAAARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAMH 105
           M++       RPS  S  +S  +S      M   +S  P     + Q++P+ST+ H
Sbjct: 644 MSL-------RPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTH 692



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>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)|
          Length = 575

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
 Frame = -2

Query: 349 PHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHA---HPCSHRWSVSPPLCTAG*LC 179
           PHQP  +  V+     L          Q H    PH    HP S   S  PPLC A   C
Sbjct: 61  PHQPISKPPVIPNLPKL----------QVHPNRLPHPIHNHPYSSPTSYPPPLCPAT-YC 109

Query: 178 HVHPPQNQKSTCTWPN 131
             +PPQ   +T   P+
Sbjct: 110 PSNPPQLAPATAIAPS 125



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>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1|
          Length = 1561

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 28/84 (33%), Positives = 38/84 (45%)
 Frame = -1

Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273
           S+    HAV   +    +S T         NT+ S+S  AS P   + KTS   S A+ S
Sbjct: 463 SSDGEDHAVMLTHHSHNSSSTD--------NTETSTSGSASSPSK-SLKTSSSLSPAKRS 513

Query: 272 MAISSPNAAARPSLFSSMVSKPSS 201
            + S  NA AR  + S   + PSS
Sbjct: 514 GSESPKNAKARVHIQSRTSTTPSS 537



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>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
 Frame = -1

Query: 362 NTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPN----AAARPSLFSSMVSKP---- 207
           ++ L+S+T A+   +  + T+  NS    S+A SS N    A A  S  SS VS      
Sbjct: 197 SSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLT 256

Query: 206 ---SSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAM 108
              S+       + SSS +      L   +PSST +
Sbjct: 257 SSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPL 292



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>IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 subunit 7|
           (eIF-3 zeta) (eIF3d) (p66)
          Length = 591

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = -1

Query: 431 AVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPN 252
           AVPF +   G    S +       +  +++ + +VP A  +++  L  VA  +  +S+P 
Sbjct: 10  AVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVADWTRNLSNP- 68

Query: 251 AAARPSLFSSMVSKPSSVY 195
            +ARP+  S   S PS+V+
Sbjct: 69  -SARPNTGSK--SDPSAVF 84



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>LY75_MOUSE (Q60767) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)|
          Length = 1723

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +1

Query: 385 GEVCDVPIFLFMKGTAW---CGAGADHYEPLIATVLQHVTPDKAACCTLRKGGC 537
           G  C+ P   F+ G  W   C    DH  P  AT L +    K   C L + GC
Sbjct: 166 GRPCEFP---FLIGETWYHDCIHDEDHSGPWCATTLSYEYDQKWGICLLPESGC 216



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>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3|
           precursor
          Length = 556

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 26/105 (24%), Positives = 42/105 (40%)
 Frame = -1

Query: 428 VPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNA 249
           +P     + ++Q S   R  R +T + SS + +   + T+ TS   S    S   S+ ++
Sbjct: 153 MPSTTSSLSSAQISSTTR--RTSTDMKSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSS 210

Query: 248 AARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSST 114
               +  SS  S  SS       S +SST           + SST
Sbjct: 211 TTSSTTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSST 255



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>HRH1_CAVPO (P31389) Histamine H1 receptor|
          Length = 488

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = -3

Query: 306 NFSLELGGEALDGNIITKRSRTPIP-VLIDGQ*ALLCVLQGDYVMFILHRTRNRHVLGPT 130
           NFS  L    L+GN  T  +R  +P V++    +L+ V     V++ +   R  H +G  
Sbjct: 14  NFSWALEDRMLEGNSTTTPTRQLMPLVVVLSSVSLVTVALNLLVLYAVRSERKLHTVGNL 73

Query: 129 ISIVYSNASLLVDSL 85
             +  S A L+V ++
Sbjct: 74  YIVSLSVADLIVGAV 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,247,772
Number of Sequences: 219361
Number of extensions: 2059830
Number of successful extensions: 6230
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6209
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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