Clone Name | bags32j15 |
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Clone Library Name | barley_pub |
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 39.7 bits (91), Expect = 0.007 Identities = 33/104 (31%), Positives = 39/104 (37%) Frame = -2 Query: 352 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 173 YPHQ H H PQ + +H + HAHP H+ S PPL T Sbjct: 290 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGN----- 339 Query: 172 HPPQNQKSTCTWPNYLHRLQQCISPCR*SQLPVPFGCRFRRAPD 41 Q Q S T Q + P + Q P P G R RR D Sbjct: 340 ---QAQVSPAT---------QQMQPTQTIQPPQPTGGRRRRVVD 371
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 39.7 bits (91), Expect = 0.007 Identities = 33/104 (31%), Positives = 39/104 (37%) Frame = -2 Query: 352 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 173 YPHQ H H PQ + +H + HAHP H+ S PPL T Sbjct: 135 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGN----- 184 Query: 172 HPPQNQKSTCTWPNYLHRLQQCISPCR*SQLPVPFGCRFRRAPD 41 Q Q S T Q + P + Q P P G R RR D Sbjct: 185 ---QAQVSPAT---------QQMQPTQTIQPPQPTGGRRRRVVD 216
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 33.9 bits (76), Expect = 0.40 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%) Frame = -1 Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 222 +S +S ++ SSS+ +SVP +T +S +S S + SS ++++RPS SS Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSS----SSSSSSSSSSSRPSSSSS 239 Query: 221 MV-SKPSSVYCRVI----MSCSSSTEPEIDMYLAQLSPSSTA 111 + + SS + + S SSST E+ PSSTA Sbjct: 240 FITTMSSSTFISTVTVTPSSSSSSTSSEV--------PSSTA 273 Score = 29.3 bits (64), Expect = 10.0 Identities = 23/79 (29%), Positives = 39/79 (49%) Frame = -1 Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 222 +S +SP T SSS+ +S + ++ +S +S + S + SS ++++ S SS Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198 Query: 221 MVSKPSSVYCRVIMSCSSS 165 S SS + S SSS Sbjct: 199 SSSSSSSSSVPITSSTSSS 217
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 32.3 bits (72), Expect = 1.2 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 17/115 (14%) Frame = -1 Query: 401 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLN------SVARHSMAISSPNAAAR 240 TS +S +T SSS+ ++ P + +T +SL + S ++ S + SS + + Sbjct: 203 TSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTS 262 Query: 239 PSLFS----SMVSKPS----SVYCRVIMSCSSSTEPEI---DMYLAQLSPSSTAM 108 PS S S + PS S S S+ST P + LA SPSST++ Sbjct: 263 PSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSI 317 Score = 30.8 bits (68), Expect = 3.4 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Frame = -1 Query: 350 SSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSSMVSKPSSV-----YCRV 186 SSST+ + + T+K + H+ AISS + ++ SS +PSS Sbjct: 113 SSSTLPTTTLSVTSKFTSYICPTCHTTAISSLSEVGTTTVVSSSAIEPSSASIISPVTST 172 Query: 185 IMSCSSSTEPEIDMYLAQLSPSSTA 111 + S +SS + SPSST+ Sbjct: 173 LSSTTSSNPTTTSLSSTSTSPSSTS 197
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 31.6 bits (70), Expect = 2.0 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Frame = -1 Query: 401 TSQTSPLGRCGRKNTQ----LSSSTIASVPCACTTKTSLLNSVARHSMAISSPN---AAA 243 TS +S LG + +SSS S + + +S +S S A SSP+ A++ Sbjct: 426 TSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASS 485 Query: 242 RPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTA 111 PS +S S PSS S SSS+ P + +PSS+A Sbjct: 486 SPSSSASSSSSPSS-------SASSSSAPS-SSASSSSAPSSSA 521
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 31.2 bits (69), Expect = 2.6 Identities = 27/116 (23%), Positives = 48/116 (41%) Frame = -1 Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273 + P P+ P + + T+ G +T + +S + A TT + S + S Sbjct: 584 TTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSS 643 Query: 272 MAISSPNAAARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAMH 105 M++ RPS S +S +S M +S P + Q++P+ST+ H Sbjct: 644 MSL-------RPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTH 692
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 31.2 bits (69), Expect = 2.6 Identities = 27/116 (23%), Positives = 48/116 (41%) Frame = -1 Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273 + P P+ P + + T+ G +T + +S + A TT + S + S Sbjct: 584 TTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSS 643 Query: 272 MAISSPNAAARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAMH 105 M++ RPS S +S +S M +S P + Q++P+ST+ H Sbjct: 644 MSL-------RPSSISETLSPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTH 692
>LKH1_SCHPO (Q10156) Dual specificity protein kinase lkh1 (EC 2.7.12.1)| Length = 575 Score = 30.4 bits (67), Expect = 4.5 Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Frame = -2 Query: 349 PHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHA---HPCSHRWSVSPPLCTAG*LC 179 PHQP + V+ L Q H PH HP S S PPLC A C Sbjct: 61 PHQPISKPPVIPNLPKL----------QVHPNRLPHPIHNHPYSSPTSYPPPLCPAT-YC 109 Query: 178 HVHPPQNQKSTCTWPN 131 +PPQ +T P+ Sbjct: 110 PSNPPQLAPATAIAPS 125
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/84 (33%), Positives = 38/84 (45%) Frame = -1 Query: 452 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 273 S+ HAV + +S T NT+ S+S AS P + KTS S A+ S Sbjct: 463 SSDGEDHAVMLTHHSHNSSSTD--------NTETSTSGSASSPSK-SLKTSSSLSPAKRS 513 Query: 272 MAISSPNAAARPSLFSSMVSKPSS 201 + S NA AR + S + PSS Sbjct: 514 GSESPKNAKARVHIQSRTSTTPSS 537
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 11/96 (11%) Frame = -1 Query: 362 NTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPN----AAARPSLFSSMVSKP---- 207 ++ L+S+T A+ + + T+ NS S+A SS N A A S SS VS Sbjct: 197 SSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLT 256 Query: 206 ---SSVYCRVIMSCSSSTEPEIDMYLAQLSPSSTAM 108 S+ + SSS + L +PSST + Sbjct: 257 SSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPL 292
>IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 subunit 7| (eIF-3 zeta) (eIF3d) (p66) Length = 591 Score = 30.0 bits (66), Expect = 5.8 Identities = 22/79 (27%), Positives = 40/79 (50%) Frame = -1 Query: 431 AVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPN 252 AVPF + G S + + +++ + +VP A +++ L VA + +S+P Sbjct: 10 AVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVADWTRNLSNP- 68 Query: 251 AAARPSLFSSMVSKPSSVY 195 +ARP+ S S PS+V+ Sbjct: 69 -SARPNTGSK--SDPSAVF 84
>LY75_MOUSE (Q60767) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)| Length = 1723 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Frame = +1 Query: 385 GEVCDVPIFLFMKGTAW---CGAGADHYEPLIATVLQHVTPDKAACCTLRKGGC 537 G C+ P F+ G W C DH P AT L + K C L + GC Sbjct: 166 GRPCEFP---FLIGETWYHDCIHDEDHSGPWCATTLSYEYDQKWGICLLPESGC 216
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 29.3 bits (64), Expect = 10.0 Identities = 26/105 (24%), Positives = 42/105 (40%) Frame = -1 Query: 428 VPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNA 249 +P + ++Q S R R +T + SS + + + T+ TS S S S+ ++ Sbjct: 153 MPSTTSSLSSAQISSTTR--RTSTDMKSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSS 210 Query: 248 AARPSLFSSMVSKPSSVYCRVIMSCSSSTEPEIDMYLAQLSPSST 114 + SS S SS S +SST + SST Sbjct: 211 TTSSTTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSST 255
>HRH1_CAVPO (P31389) Histamine H1 receptor| Length = 488 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = -3 Query: 306 NFSLELGGEALDGNIITKRSRTPIP-VLIDGQ*ALLCVLQGDYVMFILHRTRNRHVLGPT 130 NFS L L+GN T +R +P V++ +L+ V V++ + R H +G Sbjct: 14 NFSWALEDRMLEGNSTTTPTRQLMPLVVVLSSVSLVTVALNLLVLYAVRSERKLHTVGNL 73 Query: 129 ISIVYSNASLLVDSL 85 + S A L+V ++ Sbjct: 74 YIVSLSVADLIVGAV 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,247,772 Number of Sequences: 219361 Number of extensions: 2059830 Number of successful extensions: 6230 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5864 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6209 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)