>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 730

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FRMLLV F+REL +++ L +WE++W
Sbjct: 590 FFFRMLLVWFKRELLWDDVLRLWEVLW 616

>TBC15_MOUSE (Q9CXF4) TBC1 domain family member 15|
          Length = 671

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FR LL+ F+RE SF + L +WE+MW
Sbjct: 510 FCFRWLLIRFKREFSFLDILRLWEVMW 536

>GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 757

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FRMLLV F+RE  +   LS+WE++W
Sbjct: 611 FFFRMLLVWFKREFEWSSVLSLWEILW 637

>TBC15_HUMAN (Q8TC07) TBC1 domain family member 15|
          Length = 691

 Score = 37.0 bits (84), Expect = 0.041
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FR LL+ F+RE  F + L +WE+MW
Sbjct: 527 FCFRWLLIRFKREFGFLDILRLWEVMW 553

>GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 746

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FRMLLV F+RE   E+ + +WE  W
Sbjct: 604 FCFRMLLVWFKREFEMEDIMHIWENFW 630

>TBC17_HUMAN (Q9HA65) TBC1 domain family member 17|
          Length = 648

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FR LL+ F+RE  F + L +WE++W
Sbjct: 491 FCFRWLLIWFKREFPFPDVLRLWEVLW 517

>TBC17_MOUSE (Q8BYH7) TBC1 domain family member 17|
          Length = 645

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FR LL+ F+RE  F + L +WE++W
Sbjct: 491 FCFRWLLIWFKREFPFPDVLRLWEVLW 517

>GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 745

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 12/27 (44%), Positives = 21/27 (77%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMW 92
           F FRMLLV F+RE ++++  ++WE+ +
Sbjct: 594 FCFRMLLVWFKREFNYDDIFNIWEVFF 620

>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 12  FAFRMLLVLFRRELSFEESLSMWEMMWA 95
           F  R LL+ F+RE    E+L +WE  WA
Sbjct: 606 FCHRWLLLCFKREFPEAEALRIWEACWA 633

>HEM4_CLOJO (Q59294) Porphyrin biosynthesis protein hemD [Includes:|
           Uroporphyrin-III C-methyltransferase (EC 2.1.1.107)
           (Urogen III methylase) (SUMT) (Uroporphyrinogen III
           methylase) (UROM); Uroporphyrinogen-III synthase (EC
           4.2.1.75) (UROS) (Uroporphyrin
          Length = 504

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +3

Query: 363 HLSTNVLTKNGDDELPIFCVAAILIINRHKIIRDTHSIDDAIKMFNDNILKINVKRCVRL 542
           HL+  +  + G++E  + C AAI   +   I+R  +   D + ++N N +  N  +  + 
Sbjct: 368 HLALGIAERVGENEKVLICDAAIASDDIVNILRSNNIKFDRVPLYNTNYINENSNKVKKS 427

Query: 543 AVRLRKKY 566
            V    KY
Sbjct: 428 IVHGELKY 435

>SORT_HUMAN (Q99523) Sortilin precursor (Neurotensin receptor 3) (NTR3) (NT3)|
           (Glycoprotein 95) (Gp95) (100 kDa NT receptor)
          Length = 831

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = -2

Query: 530 SFYIDFQYIVVEHLDSIIY*VSISNNLVPIDYQDCCYTEYRQFVVSVLCQDICTQMR 360
           S+ IDF+ I+  + +   Y + ++++  P DY+D C   Y++  + +    +C   R
Sbjct: 599 SYTIDFKDILERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQFLRLRKSSVCQNGR 655


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,086,707
Number of Sequences: 219361
Number of extensions: 1421985
Number of successful extensions: 3528
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3528
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)