ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak17d19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A 211 8e-55
2LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog 201 1e-51
3LEA14_ARATH (O03983) Putative dessication-related protein LEA14 185 8e-47
4DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45 176 3e-44
5EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase subs... 34 0.23
6CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al... 32 1.5
7HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant prot... 32 1.5
8ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr... 30 4.4
9MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 ... 30 5.7
10DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) 30 5.7
11TREA_XANAC (Q8PPT1) Periplasmic trehalase precursor (EC 3.2.1.28... 29 7.5
12DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) 29 7.5
13Y306_THETN (Q8RCV0) UPF0309 protein TTE0306 29 7.5
14ANR15_HUMAN (Q14678) Ankyrin repeat domain-containing protein 15... 29 7.5
15RPOB_DESDG (Q30X05) DNA-directed RNA polymerase beta chain (EC 2... 29 7.5
16DOCK7_HUMAN (Q96N67) Dedicator of cytokinesis protein 7 29 7.5
17ACSL1_CAVPO (Q9JID6) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2... 29 9.7

>LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A|
          Length = 151

 Score =  211 bits (538), Expect = 8e-55
 Identities = 96/151 (63%), Positives = 126/151 (83%)
 Frame = +3

Query: 87  MAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEI 266
           M+QL++KAK FV + V+ ++KPEA +SD+ ++HV R+      ++ V NPYSH+IPICEI
Sbjct: 1   MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEI 60

Query: 267 SYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRV 446
           SY+ +SAGR +ASGT+PDPGSL ASDTT L +PVKVPY+ LVSL+KD G DWD+DYE+ +
Sbjct: 61  SYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYELEL 120

Query: 447 GLTIDLPIVGNFTLPLTKAGELKLPTLSDLF 539
           GLTIDLPIVGNFT+PL++ GE+KLPTLSD+F
Sbjct: 121 GLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151



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>LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog|
          Length = 152

 Score =  201 bits (510), Expect = 1e-51
 Identities = 92/151 (60%), Positives = 120/151 (79%)
 Frame = +3

Query: 87  MAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEI 266
           M+QL+DKAK +VAE V+ + KPEA ++D+  + V RD      ++ V NPYS  IPICEI
Sbjct: 1   MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60

Query: 267 SYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRV 446
            YSLKSAG+E+ASGT+PDPGSL ASDTT L +PVKVP+  L+SL KD G DWD+DY++ +
Sbjct: 61  KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 120

Query: 447 GLTIDLPIVGNFTLPLTKAGELKLPTLSDLF 539
           GL IDLP++GNFT+PL++ GE+KLPTLSD+F
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 151



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>LEA14_ARATH (O03983) Putative dessication-related protein LEA14|
          Length = 151

 Score =  185 bits (469), Expect = 8e-47
 Identities = 82/151 (54%), Positives = 111/151 (73%)
 Frame = +3

Query: 87  MAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEI 266
           MA L+DKAK FVA+ ++ + KPE  ++D+ ++ V RD      ++ V NPYSH+IPICEI
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 267 SYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRV 446
           S++  SAGRE+  G +PDPGSL A D T+L IPV VPY  L +L +D G DWD+DYE+++
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query: 447 GLTIDLPIVGNFTLPLTKAGELKLPTLSDLF 539
           GLTIDLP+VG FT+P++  GE+KLPT  D F
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151



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>DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45|
          Length = 151

 Score =  176 bits (447), Expect = 3e-44
 Identities = 84/151 (55%), Positives = 113/151 (74%)
 Frame = +3

Query: 87  MAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEI 266
           MAQL++KAK FVAE V+ V+KP+A + D+ ++ VGR G T   R+ V NPYS +IP+ EI
Sbjct: 1   MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEI 60

Query: 267 SYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGKDWDLDYEMRV 446
            Y+LKSAGR + SG +PDPGSL  +D T L   +KVP+  LVSL+KD G D D+DY + +
Sbjct: 61  KYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLEL 120

Query: 447 GLTIDLPIVGNFTLPLTKAGELKLPTLSDLF 539
           GL +DLP++GNFT+PL+  GE+KLP LSD+F
Sbjct: 121 GLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151



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>EPS8_MOUSE (Q08509) Epidermal growth factor receptor kinase substrate 8|
          Length = 821

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 30/112 (26%), Positives = 45/112 (40%)
 Frame = +3

Query: 42  VRHNSHEIGRAKGASMAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRL 221
           V  NS E+   K   +  L D+ + +     SG    ++     ++  + R   +  GR 
Sbjct: 542 VARNSSELSVMKDDVLEILDDRRQWWKVRNASG----DSGFVPNNILDIMRTPESGVGRA 597

Query: 222 DVRNPYSHTIPICEISYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVP 377
           D   PY+HTI      Y L+SA    A    P P  +      S+  PV VP
Sbjct: 598 DP--PYTHTIQKQRTEYGLRSADTPSAPSPPPTPAPVPVPLPPSVPAPVSVP 647



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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 245  HHPHLRDQLLPQERRPRSRLRDDAGPGVAGGQRHHQPPHTREGALRLP 388
            H  H ++   P    P +R     GPG  GG+RHH+     E A R P
Sbjct: 889  HRSHSKEAAGP----PEARSERGRGPGPEGGRRHHRRGSPEEAAEREP 932



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>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1|
           precursor
          Length = 1802

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 23/75 (30%), Positives = 32/75 (42%)
 Frame = +3

Query: 261 EISYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGKDWDLDYEM 440
           +I YS  S    ++SG  P P + VA  +TS       PYD + SL   A +     YE 
Sbjct: 790 DIVYS-PSTFAAISSGYTPSPSASVAMSSTSS----SSPYDIVYSLSSSASRSSIATYEF 844

Query: 441 RVGLTIDLPIVGNFT 485
               +  LP    +T
Sbjct: 845 SPSPSTSLPTSSTYT 859



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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
 Frame = +2

Query: 233 PLLTHHPHLRDQLLPQERRPRSRLRDDAGP--------GVAGGQRHHQPPHTREGAL 379
           P+ THH H + Q   Q+++ + +   ++GP         + GG  HH  P+    +L
Sbjct: 475 PVSTHHHHHQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSL 531



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>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -1

Query: 232  LRTSRRPDRVAPSRPTCCTDMSDRSASGFCTPDTVSATNPLALSISCAMLAPFA-RPIS- 59
            LR S   DR    +PT  T  S  + S   TP+TV  T P  L IS +   P   +P S 
Sbjct: 1291 LRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAP-ELQISTSTDQPVTPKPTSR 1349

Query: 58   CEL*RTGMESLSN 20
                RT M S+ N
Sbjct: 1350 TTRSRTNMSSVKN 1362



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>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 932

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 28/88 (31%)
 Frame = +3

Query: 312 MPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGK-----DWDLD--------YEMRVGL 452
           +P    L +  +T + +P K   +++ +L+KDAG         LD        Y+ R+G+
Sbjct: 381 LPPANMLPSKHSTIIFVPTKHHVEYVTTLLKDAGYLVSYIYGTLDQHARKQQLYQFRIGM 440

Query: 453 T------------IDLPI---VGNFTLP 491
           T            ID+PI   V N+TLP
Sbjct: 441 TSLLVVTDVAARGIDIPILANVVNYTLP 468



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>TREA_XANAC (Q8PPT1) Periplasmic trehalase precursor (EC 3.2.1.28)|
           (Alpha,alpha-trehalase) (Alpha,alpha-trehalose
           glucohydrolase)
          Length = 568

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 226 TSRRPDRVAPSRPTCCTDMSDRSASGFCTPDTVSA 122
           T+R  D ++ + P CCT +   S S F  P T++A
Sbjct: 5   TARSGDVMSSAAPPCCTSLLGLSLSMFVAPGTLTA 39



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>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 908

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 28/88 (31%)
 Frame = +3

Query: 312 MPDPGSLVASDTTSLHIPVKVPYDFLVSLMKDAGK-----DWDLD--------YEMRVGL 452
           +P    L +  +T + +P K   +++  L++DAG         LD        Y+ RVGL
Sbjct: 385 LPPANRLPSPHSTIVFVPTKHHVEYVTKLLRDAGYLVSYIYGTLDQHARKNQLYQFRVGL 444

Query: 453 T------------IDLPIVG---NFTLP 491
           T            ID+P++    NFTLP
Sbjct: 445 TNVLVVTDVAARGIDIPVLANVINFTLP 472



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>Y306_THETN (Q8RCV0) UPF0309 protein TTE0306|
          Length = 246

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +3

Query: 177 VQHVGRDGATLSGRLDVRNPYSHTIPICEISYSLKSAGREVASGTMPDPGSLV 335
           V H GR+GA +   +D +    H + +    Y  K+  R  +   + D   +V
Sbjct: 112 VSHSGRNGAPVEAAIDAKRRGLHVVALTSTEYKQKTFSRHSSGKFLEDVADIV 164



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>ANR15_HUMAN (Q14678) Ankyrin repeat domain-containing protein 15 (Kidney|
           ankyrin repeat-containing protein)
          Length = 1352

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 135 SGVQKPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEISYS-LKSAGREVAS 305
           SG+  P  ++S M +QH+    A    RL        TIP+ ++  S L+   R++ S
Sbjct: 246 SGISTPVTNVSPMHLQHIREQMAIALKRLKELEEQVRTIPVLQVKISVLQEEKRQLVS 303



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>RPOB_DESDG (Q30X05) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1375

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
 Frame = +3

Query: 54  SHEIGRAKGASMAQLIDKAKGFVAETVSGVQKPEADLSDMSVQHVGRDGATLSGRLDVRN 233
           S+EIG  K    A+ I K   + A     V+    D+ + S     RD       +  ++
Sbjct: 68  SYEIGEPK-YDQAECISKGLTYEAPIRIKVRLVVYDVDEDSENRTIRD-------IKEQD 119

Query: 234 PYSHTIPIC--EISYSLKSAGREVASGTMPDPGSLVASDTTSLHIPVKVPYDFLVSLMKD 407
            Y  T+P+   + ++ +    R + +     PG +   D    H   KV Y   V  M+ 
Sbjct: 120 IYFGTLPLMTEKGTFIINGTERVIVNQLQRSPGIIFEHDAGKTHSSRKVLYSCRVIPMRG 179

Query: 408 AGKDWDLDYEMRVGLTID 461
           +  D+D D++  + + ID
Sbjct: 180 SWLDFDYDHKDILYVRID 197



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>DOCK7_HUMAN (Q96N67) Dedicator of cytokinesis protein 7|
          Length = 1542

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 517 SLSSPALVSGSVKLPTMGRSMVRPTRIS*SRSQSFPAS 404
           S   P  + GSV   TM RS VRP  ++ +RS+S   S
Sbjct: 274 SSPGPGGLGGSVHYATMARSAVRPASLNLNRSRSLSNS 311



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>ACSL1_CAVPO (Q9JID6) Long-chain-fatty-acid--CoA ligase 1 (EC 6.2.1.3)|
           (Long-chain acyl-CoA synthetase 1) (LACS 1)
           (Palmitoyl-CoA ligase)
          Length = 698

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 147 KPEADLSDMSVQHVGRDGATLSGRLDVRNPYSHTIPICEISYSLKSAGREVAS 305
           KP  DLS  SV+  G DGA  S  LD   P  +        Y +   G +V++
Sbjct: 52  KPPCDLSMQSVEVAGSDGARRSTLLDSDEPLVYFYDDVRTLYDVFQRGIQVSN 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,957,048
Number of Sequences: 219361
Number of extensions: 985643
Number of successful extensions: 3554
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3551
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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