ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak39e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549806.1| Oryza sativa (japonica cultivar-group), mRNA 278 2e-71
2gb|AY972084.1| Oryza sativa (japonica cultivar-group) sphingosin... 278 2e-71
3gb|AY106741.1| Zea mays PCO149699 mRNA sequence 182 8e-43
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7ref|NM_102563.2| Arabidopsis thaliana carboxy-lyase AT1G27980 mR... 48 0.031
8gb|AY113914.1| Arabidopsis thaliana putative sphingosine-1-phosp... 48 0.031
9gb|AF360166.1| Arabidopsis thaliana putative sphingosine-1-phosp... 48 0.031
10emb|BX814065.1|CNS0AEBE Arabidopsis thaliana Full-length cDNA Co... 48 0.031
11gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13... 48 0.031
12gb|AY085442.1| Arabidopsis thaliana clone 1518 mRNA, complete se... 48 0.031
13dbj|AB175035.1| Arabidopsis thaliana AtSPL1 mRNA for sphingosine... 48 0.031
14ref|XM_384589.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 44 0.49
15emb|BX005167.12| Mouse DNA sequence from clone RP23-247K19 on ch... 44 0.49
16emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in ... 42 1.9
17gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cance... 40 7.7
18gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, com... 40 7.7
19gb|AC138334.11| Mus musculus chromosome 7, clone RP23-306H5, com... 40 7.7
20gb|AC160140.2| Mus musculus BAC clone RP23-40C13 from chromosome... 40 7.7
21gb|AC186561.1| Gasterosteus aculeatus clone VMRC28-125N12, compl... 40 7.7
22gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosom... 40 7.7
23gb|AC146143.2| Pan troglodytes BAC clone RP43-37I19 from 7, comp... 40 7.7
24gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome... 40 7.7
25gb|AC124541.4| Mus musculus BAC clone RP23-257F7 from 7, complet... 40 7.7
26gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, compl... 40 7.7
27gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome... 40 7.7
28emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chr... 40 7.7
29emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, c... 40 7.7
30gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, comp... 40 7.7
31gb|AC099652.2| Homo sapiens BAC clone RP11-750J7 from 7, complet... 40 7.7
32dbj|AK156094.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 7.7
33gb|AC020741.4|AC020741 Homo sapiens BAC clone RP11-798L4 from 4,... 40 7.7
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
35gb|AC017053.8| Homo sapiens BAC clone RP11-339D8 from 2, complet... 40 7.7
36gb|AC009107.11| Homo sapiens chromosome 16 clone RP11-459F6, com... 40 7.7
37dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
38gb|AC147652.4| Pan troglodytes BAC clone RP43-136A3 from chromos... 40 7.7
39emb|CT010575.15| Mouse DNA sequence from clone RP23-217J21 on ch... 40 7.7
40gb|AC149605.7| Mus musculus BAC clone RP23-473E20 from 7, comple... 40 7.7
41gb|AF069299.1|F6N15 Arabidopsis thaliana BAC F6N15 40 7.7
42gb|AC004708.1|AC004708 CIC5B11.1 check: 4870 from: 1 to: 1672... 40 7.7
43gb|AC167659.7| Mus musculus chromosome 7, clone RP23-165I8, comp... 40 7.7 
>ref|XM_549806.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1686

 Score =  278 bits (140), Expect = 2e-71
 Identities = 308/364 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggaagtctcaaagaagatacaaaaaggaattgatgatatctcaggtttatttgtgattgg 60
            |||||| || ||||| ||||||| ||| ||||| |||||| |||| || |||||||||||
Sbjct: 1311 ggaagtgtcgaagaaaatacaaagagggattgaagatatcccagggttgtttgtgattgg 1370

                                                                        
Query: 61   gaaaccagacatgactgtcgtggcctttgggtcggacgcggtcgacatatttgaggtgaa 120
             || |||||||||||||||||||| ||||| || ||  |||| || ||||||||||||||
Sbjct: 1371 aaagccagacatgactgtcgtggcatttggctcagattcggttgatatatttgaggtgaa 1430

                                                                        
Query: 121  tgacataatgtcatcaaaaggatggcacctcaatgctcttcagagacccaacagtttgca 180
             |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 1431 cgacataatgtcatcaaaaggctggcaccttaatgctctgcagagacccaacagtttaca 1490

                                                                        
Query: 181  catctgcgtgacacttcaacacacggcaatttacgaggaattcctcaaggatctcgagga 240
            ||| || |||||||| || |||||||  || || ||||||||||| ||||||||  | ||
Sbjct: 1491 catttgtgtgacactgcagcacacggtcatatatgaggaattcctgaaggatctgaaaga 1550

                                                                        
Query: 241  ttctgtaaacaccgtgaaagcgaatccagggcctatcagcggggggatggctccgatcta 300
            ||| ||  |||| || ||||| |||||||||||||| |||||||||   |||||||| ||
Sbjct: 1551 ttcagtggacactgtaaaagcaaatccagggcctattagcggggggcgagctccgattta 1610

                                                                        
Query: 301  cggcgcggctgggaagatgccagacagaggcacggtcaaggagttacttgtagagttcat 360
            ||| || ||||| |||||||| |||||||||| ||||| |||| | || || ||||||||
Sbjct: 1611 cggagctgctggcaagatgccggacagaggcatggtcagggagctgctggtggagttcat 1670

                
Query: 361  ggac 364
            ||||
Sbjct: 1671 ggac 1674
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>gb|AY972084.1| Oryza sativa (japonica cultivar-group) sphingosine-1-phosphate lyase
            (SPL) mRNA, complete cds
          Length = 1620

 Score =  278 bits (140), Expect = 2e-71
 Identities = 308/364 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggaagtctcaaagaagatacaaaaaggaattgatgatatctcaggtttatttgtgattgg 60
            |||||| || ||||| ||||||| ||| ||||| |||||| |||| || |||||||||||
Sbjct: 1245 ggaagtgtcgaagaaaatacaaagagggattgaagatatcccagggttgtttgtgattgg 1304

                                                                        
Query: 61   gaaaccagacatgactgtcgtggcctttgggtcggacgcggtcgacatatttgaggtgaa 120
             || |||||||||||||||||||| ||||| || ||  |||| || ||||||||||||||
Sbjct: 1305 aaagccagacatgactgtcgtggcatttggctcagattcggttgatatatttgaggtgaa 1364

                                                                        
Query: 121  tgacataatgtcatcaaaaggatggcacctcaatgctcttcagagacccaacagtttgca 180
             |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 1365 cgacataatgtcatcaaaaggctggcaccttaatgctctgcagagacccaacagtttaca 1424

                                                                        
Query: 181  catctgcgtgacacttcaacacacggcaatttacgaggaattcctcaaggatctcgagga 240
            ||| || |||||||| || |||||||  || || ||||||||||| ||||||||  | ||
Sbjct: 1425 catttgtgtgacactgcagcacacggtcatatatgaggaattcctgaaggatctgaaaga 1484

                                                                        
Query: 241  ttctgtaaacaccgtgaaagcgaatccagggcctatcagcggggggatggctccgatcta 300
            ||| ||  |||| || ||||| |||||||||||||| |||||||||   |||||||| ||
Sbjct: 1485 ttcagtggacactgtaaaagcaaatccagggcctattagcggggggcgagctccgattta 1544

                                                                        
Query: 301  cggcgcggctgggaagatgccagacagaggcacggtcaaggagttacttgtagagttcat 360
            ||| || ||||| |||||||| |||||||||| ||||| |||| | || || ||||||||
Sbjct: 1545 cggagctgctggcaagatgccggacagaggcatggtcagggagctgctggtggagttcat 1604

                
Query: 361  ggac 364
            ||||
Sbjct: 1605 ggac 1608
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>gb|AY106741.1| Zea mays PCO149699 mRNA sequence
          Length = 329

 Score =  182 bits (92), Expect = 8e-43
 Identities = 242/292 (82%)
 Strand = Plus / Plus

                                                                       
Query: 8   tcaaagaagatacaaaaaggaattgatgatatctcaggtttatttgtgattgggaaacca 67
           |||||||| ||||||| ||| ||||  || ||| |||| || |||||||| |||||||| 
Sbjct: 38  tcaaagaaaatacaaagagggattggagagatcccagggttgtttgtgatagggaaaccg 97

                                                                       
Query: 68  gacatgactgtcgtggcctttgggtcggacgcggtcgacatatttgaggtgaatgacata 127
           || ||||| || ||||| || || || ||||  |||||||||||||||||||| ||||||
Sbjct: 98  gatatgaccgttgtggcgttcggctcagacgttgtcgacatatttgaggtgaacgacata 157

                                                                       
Query: 128 atgtcatcaaaaggatggcacctcaatgctcttcagagacccaacagtttgcacatctgc 187
           |||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||| 
Sbjct: 158 atgtcatcaaaaggttggcatctcaatgctctgcagagacctaacagcttgcatatctgt 217

                                                                       
Query: 188 gtgacacttcaacacacggcaatttacgaggaattcctcaaggatctcgaggattctgta 247
           ||||| |||||||||||| |  |||||||  ||||||| ||||||||  | || ||||| 
Sbjct: 218 gtgacccttcaacacacgactgtttacgaccaattcctgaaggatctgcaagactctgtc 277

                                                               
Query: 248 aacaccgtgaaagcgaatccagggcctatcagcggggggatggctccgatct 299
           ||||| |||||||| || ||||| || || ||||| || | |||||| ||||
Sbjct: 278 aacactgtgaaagcaaacccaggcccgattagcggcggaaaggctcctatct 329
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             complete sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                         
Query: 29    attgatgatatctcaggtttatttgtgattgggaaaccagacatgactgtcgtggccttt 88
             ||||| |||||| |||| || ||||||||||| || |||||||||||||||||||| |||
Sbjct: 39457 attgaagatatcccagggttgtttgtgattggaaagccagacatgactgtcgtggcattt 39516

                                                                         
Query: 89    gggtcggacgcggtcgacatatttgaggtgaatgacataatgtcatcaaaaggatggcac 148
             || || ||  |||| || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 39517 ggctcagattcggttgatatatttgaggtgaacgacataatgtcatcaaaaggctggcac 39576

                                       
Query: 149   ctcaatgctcttcagagacccaacag 174
             || |||||||| ||||||||||||||
Sbjct: 39577 cttaatgctctgcagagacccaacag 39602



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                         
Query: 257   aaagcgaatccagggcctatcagcggggggatggctccgatctacggcgcggctgggaag 316
             ||||| |||||||||||||| |||||||||   |||||||| ||||| || ||||| |||
Sbjct: 39888 aaagcaaatccagggcctattagcggggggcgagctccgatttacggagctgctggcaag 39947

                                                             
Query: 317   atgccagacagaggcacggtcaaggagttacttgtagagttcatggac 364
             ||||| |||||||||| ||||| |||| | || || ||||||||||||
Sbjct: 39948 atgccggacagaggcatggtcagggagctgctggtggagttcatggac 39995



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 172   cagtttgcacatctgcgtgacacttcaacacacggcaatttacgaggaattcctcaagga 231
             |||||| ||||| || |||||||| || |||||||  || || ||||||||||| |||||
Sbjct: 39700 cagtttacacatttgtgtgacactgcagcacacggtcatatatgaggaattcctgaagga 39759

                
Query: 232   tct 234
             |||
Sbjct: 39760 tct 39762
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>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672D08
          Length = 173729

 Score =  155 bits (78), Expect = 2e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                         
Query: 29    attgatgatatctcaggtttatttgtgattgggaaaccagacatgactgtcgtggccttt 88
             ||||| |||||| |||| || ||||||||||| || |||||||||||||||||||| |||
Sbjct: 37259 attgaagatatcccagggttgtttgtgattggaaagccagacatgactgtcgtggcattt 37318

                                                                         
Query: 89    gggtcggacgcggtcgacatatttgaggtgaatgacataatgtcatcaaaaggatggcac 148
             || || ||  |||| || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 37319 ggctcagattcggttgatatatttgaggtgaacgacataatgtcatcaaaaggctggcac 37378

                                       
Query: 149   ctcaatgctcttcagagacccaacag 174
             || |||||||| ||||||||||||||
Sbjct: 37379 cttaatgctctgcagagacccaacag 37404



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                         
Query: 257   aaagcgaatccagggcctatcagcggggggatggctccgatctacggcgcggctgggaag 316
             ||||| |||||||||||||| |||||||||   |||||||| ||||| || ||||| |||
Sbjct: 37690 aaagcaaatccagggcctattagcggggggcgagctccgatttacggagctgctggcaag 37749

                                                             
Query: 317   atgccagacagaggcacggtcaaggagttacttgtagagttcatggac 364
             ||||| |||||||||| ||||| |||| | || || ||||||||||||
Sbjct: 37750 atgccggacagaggcatggtcagggagctgctggtggagttcatggac 37797



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 172   cagtttgcacatctgcgtgacacttcaacacacggcaatttacgaggaattcctcaagga 231
             |||||| ||||| || |||||||| || |||||||  || || ||||||||||| |||||
Sbjct: 37502 cagtttacacatttgtgtgacactgcagcacacggtcatatatgaggaattcctgaagga 37561

                
Query: 232   tct 234
             |||
Sbjct: 37562 tct 37564
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>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0402A09
          Length = 141966

 Score =  155 bits (78), Expect = 2e-34
 Identities = 129/146 (88%)
 Strand = Plus / Plus

                                                                         
Query: 29    attgatgatatctcaggtttatttgtgattgggaaaccagacatgactgtcgtggccttt 88
             ||||| |||||| |||| || ||||||||||| || |||||||||||||||||||| |||
Sbjct: 24387 attgaagatatcccagggttgtttgtgattggaaagccagacatgactgtcgtggcattt 24446

                                                                         
Query: 89    gggtcggacgcggtcgacatatttgaggtgaatgacataatgtcatcaaaaggatggcac 148
             || || ||  |||| || |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 24447 ggctcagattcggttgatatatttgaggtgaacgacataatgtcatcaaaaggctggcac 24506

                                       
Query: 149   ctcaatgctcttcagagacccaacag 174
             || |||||||| ||||||||||||||
Sbjct: 24507 cttaatgctctgcagagacccaacag 24532



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 92/108 (85%)
 Strand = Plus / Plus

                                                                         
Query: 257   aaagcgaatccagggcctatcagcggggggatggctccgatctacggcgcggctgggaag 316
             ||||| |||||||||||||| |||||||||   |||||||| ||||| || ||||| |||
Sbjct: 24818 aaagcaaatccagggcctattagcggggggcgagctccgatttacggagctgctggcaag 24877

                                                             
Query: 317   atgccagacagaggcacggtcaaggagttacttgtagagttcatggac 364
             ||||| |||||||||| ||||| |||| | || || ||||||||||||
Sbjct: 24878 atgccggacagaggcatggtcagggagctgctggtggagttcatggac 24925



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 172   cagtttgcacatctgcgtgacacttcaacacacggcaatttacgaggaattcctcaagga 231
             |||||| ||||| || |||||||| || |||||||  || || ||||||||||| |||||
Sbjct: 24630 cagtttacacatttgtgtgacactgcagcacacggtcatatatgaggaattcctgaagga 24689

                
Query: 232   tct 234
             |||
Sbjct: 24690 tct 24692
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>ref|NM_102563.2| Arabidopsis thaliana carboxy-lyase AT1G27980 mRNA, complete cds
          Length = 2082

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 107  atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
            |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 1423 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 1482

                    
Query: 167  cccaacag 174
            ||||||||
Sbjct: 1483 cccaacag 1490
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>gb|AY113914.1| Arabidopsis thaliana putative sphingosine-1-phosphate lyase
            (At1g27980) mRNA, complete cds
          Length = 1666

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 107  atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
            |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 1366 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 1425

                    
Query: 167  cccaacag 174
            ||||||||
Sbjct: 1426 cccaacag 1433
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>gb|AF360166.1| Arabidopsis thaliana putative sphingosine-1-phosphate lyase
            (At1g27980) mRNA, complete cds
          Length = 1836

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 107  atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
            |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 1425 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 1484

                    
Query: 167  cccaacag 174
            ||||||||
Sbjct: 1485 cccaacag 1492
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>emb|BX814065.1|CNS0AEBE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB55ZB02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1748

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 107  atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
            |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 1392 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 1451

                    
Query: 167  cccaacag 174
            ||||||||
Sbjct: 1452 cccaacag 1459
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>gb|AC069471.4|AC069471 Arabidopsis thaliana chromosome 1 BAC F13K9 genomic sequence, complete
             sequence
          Length = 126991

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 107   atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
             |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 38468 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 38527

                     
Query: 167   cccaacag 174
             ||||||||
Sbjct: 38528 cccaacag 38535
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>gb|AY085442.1| Arabidopsis thaliana clone 1518 mRNA, complete sequence
          Length = 531

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 107 atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
           |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 135 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 194

                   
Query: 167 cccaacag 174
           ||||||||
Sbjct: 195 cccaacag 202
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>dbj|AB175035.1| Arabidopsis thaliana AtSPL1 mRNA for sphingosine-1-phosphate lyase,
            complete cds
          Length = 1635

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 107  atatttgaggtgaatgacataatgtcatcaaaaggatggcacctcaatgctcttcagaga 166
            |||||||| || |||||||| ||||| || ||||| |||||  | ||||| || ||||||
Sbjct: 1366 atatttgaagttaatgacatcatgtcttctaaaggttggcatttgaatgcactacagaga 1425

                    
Query: 167  cccaacag 174
            ||||||||
Sbjct: 1426 cccaacag 1433
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>ref|XM_384589.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04413.1)
            partial mRNA
          Length = 1719

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 140  ggatggcacctcaatgctcttcagag 165
            |||||||||||||| |||||||||||
Sbjct: 1444 ggatggcacctcaacgctcttcagag 1469
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>emb|BX005167.12| Mouse DNA sequence from clone RP23-247K19 on chromosome X, complete
              sequence
          Length = 212046

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 113    gaggtgaatgacataatgtcat 134
              ||||||||||||||||||||||
Sbjct: 166320 gaggtgaatgacataatgtcat 166299
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>emb|CR931763.8| Zebrafish DNA sequence from clone DKEY-65B12 in linkage group 5,
            complete sequence
          Length = 186739

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  aatgacataatgtcatcaaaa 139
            |||||||||||||||||||||
Sbjct: 6294 aatgacataatgtcatcaaaa 6274
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>gb|AC153609.2| Mus musculus 6 BAC RP23-77I23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 221782

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 532   tcaataaagttacattttca 551
             ||||||||||||||||||||
Sbjct: 83842 tcaataaagttacattttca 83861
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>gb|AC108442.6| Mus musculus chromosome 8, clone RP23-242M14, complete sequence
          Length = 209618

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   cccattggttatctctctgt 409
             ||||||||||||||||||||
Sbjct: 51854 cccattggttatctctctgt 51873
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>gb|AC138334.11| Mus musculus chromosome 7, clone RP23-306H5, complete sequence
          Length = 177803

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    cctcaaggatctcgaggattctgt 246
              |||||||||||| |||||||||||
Sbjct: 176220 cctcaaggatcttgaggattctgt 176197
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>gb|AC160140.2| Mus musculus BAC clone RP23-40C13 from chromosome 13, complete sequence
          Length = 118653

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 43    aggtttatttgtgattgggaaaccagac 70
             |||||| ||||||| |||||||||||||
Sbjct: 47780 aggtttgtttgtgagtgggaaaccagac 47753
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>gb|AC186561.1| Gasterosteus aculeatus clone VMRC28-125N12, complete sequence
          Length = 147166

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 505   atgtatctatgtatcagctaaatg 528
             |||||| |||||||||||||||||
Sbjct: 50115 atgtatgtatgtatcagctaaatg 50092
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>gb|AC139347.4| Mus musculus BAC clone RP24-334F11 from chromosome 16, complete
            sequence
          Length = 193398

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    gtctcaaagaagatacaaaa 24
            ||||||||||||||||||||
Sbjct: 4736 gtctcaaagaagatacaaaa 4717
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>gb|AC146143.2| Pan troglodytes BAC clone RP43-37I19 from 7, complete sequence
          Length = 188333

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   aattcctcaaggatctcgag 238
             ||||||||||||||||||||
Sbjct: 48197 aattcctcaaggatctcgag 48216
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>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence
          Length = 165934

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   ttcaataaagttacattttc 550
             ||||||||||||||||||||
Sbjct: 84469 ttcaataaagttacattttc 84450
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>gb|AC124541.4| Mus musculus BAC clone RP23-257F7 from 7, complete sequence
          Length = 145556

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   tgtaccatgtatgtacaacc 426
             ||||||||||||||||||||
Sbjct: 79681 tgtaccatgtatgtacaacc 79662
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>gb|AC129021.4| Mus musculus BAC clone RP23-312H15 from 16, complete sequence
          Length = 184961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      gtctcaaagaagatacaaaa 24
              ||||||||||||||||||||
Sbjct: 163662 gtctcaaagaagatacaaaa 163643
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>gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome 14, complete sequence
          Length = 187377

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 531    ttcaataaagttacattttc 550
              ||||||||||||||||||||
Sbjct: 176241 ttcaataaagttacattttc 176222
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>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the
             3' end of the KCNN3 gene for potassium intermediate/small
             conductance calcium-activated channel, subfamily N, member
             3, a novel gene and the 5' end of the ADAR gene for
             adenosine deaminase, RNA-specific, complete sequence
          Length = 173014

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 104   gacatatttgaggtgaatgacataatgt 131
             ||||| ||||||||||||||||| ||||
Sbjct: 83403 gacatctttgaggtgaatgacatgatgt 83430
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>emb|AL161471.2|ATCHRIV1 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 1
          Length = 197119

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   taaatgggttcaataaagtt 542
             ||||||||||||||||||||
Sbjct: 91438 taaatgggttcaataaagtt 91457
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>gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, complete sequence
          Length = 187209

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    tgacataatgtcatcaaaag 140
              ||||||||||||||||||||
Sbjct: 178333 tgacataatgtcatcaaaag 178352
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>gb|AC099652.2| Homo sapiens BAC clone RP11-750J7 from 7, complete sequence
          Length = 152754

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   taaatgggttcaataaagtt 542
             ||||||||||||||||||||
Sbjct: 64033 taaatgggttcaataaagtt 64052
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>dbj|AK156094.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830007M13 product:unclassifiable, full
            insert sequence
          Length = 3597

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    gtctcaaagaagatacaaaa 24
            ||||||||||||||||||||
Sbjct: 1670 gtctcaaagaagatacaaaa 1689
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>gb|AC020741.4|AC020741 Homo sapiens BAC clone RP11-798L4 from 4, complete sequence
          Length = 191804

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 529   ggttcaataaagttacattttcag 552
             |||||||||||||||| |||||||
Sbjct: 39845 ggttcaataaagttactttttcag 39822
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       caaaaaggaattgatgatat 39
                ||||||||||||||||||||
Sbjct: 25505506 caaaaaggaattgatgatat 25505487
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>gb|AC017053.8| Homo sapiens BAC clone RP11-339D8 from 2, complete sequence
          Length = 181952

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atgatatctcaggtttattt 52
             ||||||||||||||||||||
Sbjct: 54040 atgatatctcaggtttattt 54021
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>gb|AC009107.11| Homo sapiens chromosome 16 clone RP11-459F6, complete sequence
          Length = 208220

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    aagcgaatccagggcctatc 277
              ||||||||||||||||||||
Sbjct: 125856 aagcgaatccagggcctatc 125875
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>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0523F01
          Length = 146419

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caaaaaggaattgatgatat 39
             ||||||||||||||||||||
Sbjct: 23823 caaaaaggaattgatgatat 23804
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>gb|AC147652.4| Pan troglodytes BAC clone RP43-136A3 from chromosome 7, complete
             sequence
          Length = 196621

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   aattcctcaaggatctcgag 238
             ||||||||||||||||||||
Sbjct: 73333 aattcctcaaggatctcgag 73352
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>emb|CT010575.15| Mouse DNA sequence from clone RP23-217J21 on chromosome 13, complete
              sequence
          Length = 201791

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 43     aggtttatttgtgattgggaaaccagac 70
              |||||| ||||||| |||||||||||||
Sbjct: 189147 aggtttgtttgtgagtgggaaaccagac 189120
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>gb|AC149605.7| Mus musculus BAC clone RP23-473E20 from 7, complete sequence
          Length = 195585

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    tgtaccatgtatgtacaacc 426
              ||||||||||||||||||||
Sbjct: 132621 tgtaccatgtatgtacaacc 132640
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>gb|AF069299.1|F6N15 Arabidopsis thaliana BAC F6N15
          Length = 95643

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   taaatgggttcaataaagtt 542
             ||||||||||||||||||||
Sbjct: 86300 taaatgggttcaataaagtt 86319
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>gb|AC004708.1|AC004708 CIC5B11.1  check: 4870  from: 1  to: 167234, complete sequence
          Length = 167234

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    taaatgggttcaataaagtt 542
              ||||||||||||||||||||
Sbjct: 116849 taaatgggttcaataaagtt 116868



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    taaatgggttcaataaagtt 542
              ||||||||||||||||||||
Sbjct: 116799 taaatgggttcaataaagtt 116818
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>gb|AC167659.7| Mus musculus chromosome 7, clone RP23-165I8, complete sequence
          Length = 248723

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   cctcaaggatctcgaggattctgt 246
             |||||||||||| |||||||||||
Sbjct: 34278 cctcaaggatcttgaggattctgt 34255


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,832,916
Number of Sequences: 3902068
Number of extensions: 4832916
Number of successful extensions: 104358
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104226
Number of HSP's gapped (non-prelim): 132
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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