ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak44b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY603381.1| Oryza sativa (japonica cultivar-group) LysM-domai... 260 5e-66
2dbj|AK062542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5ref|NM_106411.3| Arabidopsis thaliana unknown protein AT1G77630 ... 42 2.1
6gb|BT010885.1| Arabidopsis thaliana At1g77630 gene, complete cds 42 2.1
7ref|XM_506077.1| Yarrowia lipolytica CLIB122, YALI0F31031g predi... 42 2.1
8emb|BX817126.1|CNS0ABRH Arabidopsis thaliana Full-length cDNA Co... 42 2.1
9dbj|AK176769.1| Arabidopsis thaliana mRNA for predicted GPI-anch... 42 2.1
10emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.1
11gb|DQ196238.1| Puccinia graminis f. sp. tritici hypothetical cla... 42 2.1
12gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, com... 40 8.4
13gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.4
14ref|XM_363100.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 8.4
15ref|XM_570989.1| Cryptococcus neoformans var. neoformans JEC21 t... 40 8.4
16gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosom... 40 8.4
17gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, c... 40 8.4
18gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, comple... 40 8.4
19gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, co... 40 8.4
20emb|AL080248.7|HSBA19D2 Human DNA sequence from clone RP11-19D2 ... 40 8.4
21emb|AL356605.20| Human DNA sequence from clone RP11-414G18 on ch... 40 8.4
22ref|XM_778518.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.4
23emb|AL591851.12| Mouse DNA sequence from clone RP23-43M4 on chro... 40 8.4
24gb|AC021055.18| Homo sapiens 3 BAC RP11-139K4 (Roswell Park Canc... 40 8.4
25emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chro... 40 8.4
26gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Can... 40 8.4
27emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, co... 40 8.4
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
29dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.4
30dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 8.4
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.4
32emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.4
33emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.4
34gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 8.4
35dbj|AB035665.1| Branchiostoma belcheri AmphiMRLC mRNA for myosin... 40 8.4

>gb|AY603381.1| Oryza sativa (japonica cultivar-group) LysM-domain GPI-anchored
            protein mRNA, complete cds
          Length = 1521

 Score =  260 bits (131), Expect = 5e-66
 Identities = 356/431 (82%)
 Strand = Plus / Plus

                                                                        
Query: 6    gacatccttgcaattccattgtcagcatgtgcgtctacgtttcctaactttgcttcggac 65
            |||||||||||||| ||| || | || ||||| || | |||||| |||| ||||||||||
Sbjct: 675  gacatccttgcaatcccactgcctgcctgtgcatcaatgtttcccaactctgcttcggac 734

                                                                        
Query: 66   tatggattgctggtggcaaacggaacctatgcactaactgctggcaactgtgtggaatgc 125
            ||||||||||| |||||||| || |||||||||||||||||||| ||||||||| |  ||
Sbjct: 735  tatggattgcttgtggcaaatgggacctatgcactaactgctggaaactgtgtgcagagc 794

                                                                        
Query: 126  agttgtgggccaggggatctcaatctgtactgcactcccgcttcattaggaacatcatgt 185
            || ||||| ||||| ||||||||  |||| ||||| || |||||||||  | ||||||||
Sbjct: 795  agctgtggaccaggagatctcaaattgtattgcacaccagcttcattaacagcatcatgt 854

                                                                        
Query: 186  tcaagtatgcagtgctccaatagcagtctaatgcttggtaatatgactagccagcccacc 245
            ||||||||||||||| |||||||||  || |||||||| ||| |||||  |||  |||||
Sbjct: 855  tcaagtatgcagtgccccaatagcaacctcatgcttgggaatgtgactgcccaatccacc 914

                                                                        
Query: 246  agtggtggctgtggtgtctcgtcttgcagctatgctggcttcattaacggaagcattgcc 305
            |||||||| ||   |||||| |||||||||||||||||  |  |||| |||| |||||||
Sbjct: 915  agtggtggatgcaatgtctcatcttgcagctatgctggacttgttaatggaaccattgcc 974

                                                                        
Query: 306  acatcgctatcctcaggtcttcaacctacatgccctggaccgcatcaatttcctccactg 365
            || ||||| ||||| ||||||||||| |||||||| ||||| ||||| || || ||||| 
Sbjct: 975  acgtcgctctcctctggtcttcaacccacatgcccaggaccacatcagttccccccactc 1034

                                                                        
Query: 366  atggagccgtccactgcagcaatccatggctcataccttgctccgtcgccttcgccagga 425
            | || | |  | | ||||| || ||| || |||||||||||||| || ||| | ||||||
Sbjct: 1035 agggcgacaccaattgcagtaaaccaaggatcataccttgctccatcacctgcaccagga 1094

                       
Query: 426  cctggggaggc 436
             ||||||||||
Sbjct: 1095 gctggggaggc 1105



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>dbj|AK062542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-G03, full
           insert sequence
          Length = 594

 Score =  202 bits (102), Expect = 1e-48
 Identities = 285/346 (82%)
 Strand = Plus / Plus

                                                                       
Query: 91  cctatgcactaactgctggcaactgtgtggaatgcagttgtgggccaggggatctcaatc 150
           ||||||||||||||||||| ||||||||| | ||||| ||||| ||||| ||||||||  
Sbjct: 1   cctatgcactaactgctggaaactgtgtgcagtgcagctgtggaccaggagatctcaaat 60

                                                                       
Query: 151 tgtactgcactcccgcttcattaggaacatcatgttcaagtatgcagtgctccaatagca 210
           |||| ||||| || |||||||||  | ||||||||||||||||||||||| |||||||||
Sbjct: 61  tgtattgcacaccagcttcattaacagcatcatgttcaagtatgcagtgccccaatagca 120

                                                                       
Query: 211 gtctaatgcttggtaatatgactagccagcccaccagtggtggctgtggtgtctcgtctt 270
             || |||||||| ||| |||||  |||  ||||||||||||| ||   |||||| ||||
Sbjct: 121 acctcatgcttgggaatgtgactgcccaatccaccagtggtggatgcaatgtctcatctt 180

                                                                       
Query: 271 gcagctatgctggcttcattaacggaagcattgccacatcgctatcctcaggtcttcaac 330
           |||||||||||||  |  |||| |||| ||||||||| ||||| ||||| ||||||||||
Sbjct: 181 gcagctatgctggacttgttaatggaaccattgccacgtcgctctcctctggtcttcaac 240

                                                                       
Query: 331 ctacatgccctggaccgcatcaatttcctccactgatggagccgtccactgcagcaatcc 390
           | |||||||| ||||| ||||| || || ||||| | || | |  | | ||||| || ||
Sbjct: 241 ccacatgcccaggaccacatcagttccccccactcagggcgacaccaattgcagtaaacc 300

                                                         
Query: 391 atggctcataccttgctccgtcgccttcgccaggacctggggaggc 436
           | || |||||||||||||| || ||| | |||||| ||||||||||
Sbjct: 301 aaggatcataccttgctccatcacctgcaccaggagctggggaggc 346



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                           
Query: 44      gtttcctaactttgcttcggactatggattgctggtggcaaacggaacctatgcactaac 103
               |||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 5572218 gtttcccaactctgcttcggactatggattgcttgtggcaaatgggacctatgcactaac 5572277

                                                            
Query: 104     tgctggcaactgtgtggaatgcagttgtgggccaggggatctcaa 148
               |||||| ||||||||| | ||||| ||||| ||||| ||||||||
Sbjct: 5572278 tgctggaaactgtgtgcagtgcagctgtggaccaggagatctcaa 5572322



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 112/133 (84%)
 Strand = Plus / Plus

                                                                           
Query: 151     tgtactgcactcccgcttcattaggaacatcatgttcaagtatgcagtgctccaatagca 210
               |||| ||||| || |||||||||  | ||||||||||||||||||||||| |||||||||
Sbjct: 5572412 tgtattgcacaccagcttcattaacagcatcatgttcaagtatgcagtgccccaatagca 5572471

                                                                           
Query: 211     gtctaatgcttggtaatatgactagccagcccaccagtggtggctgtggtgtctcgtctt 270
                 || |||||||| ||| |||||  |||  ||||||||||||| ||   |||||| ||||
Sbjct: 5572472 acctcatgcttgggaatgtgactgcccaatccaccagtggtggatgcaatgtctcatctt 5572531

                            
Query: 271     gcagctatgctgg 283
               |||||||||||||
Sbjct: 5572532 gcagctatgctgg 5572544



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 396     tcataccttgctccgtcgccttcgccaggacctggggaggc 436
               |||||||||||||| || ||| | |||||| ||||||||||
Sbjct: 5573459 tcataccttgctccatcacctgcaccaggagctggggaggc 5573499



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>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664C05
          Length = 165354

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                          
Query: 44     gtttcctaactttgcttcggactatggattgctggtggcaaacggaacctatgcactaac 103
              |||||| |||| ||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 119126 gtttcccaactctgcttcggactatggattgcttgtggcaaatgggacctatgcactaac 119185

                                                           
Query: 104    tgctggcaactgtgtggaatgcagttgtgggccaggggatctcaa 148
              |||||| ||||||||| | ||||| ||||| ||||| ||||||||
Sbjct: 119186 tgctggaaactgtgtgcagtgcagctgtggaccaggagatctcaa 119230



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 112/133 (84%)
 Strand = Plus / Plus

                                                                          
Query: 151    tgtactgcactcccgcttcattaggaacatcatgttcaagtatgcagtgctccaatagca 210
              |||| ||||| || |||||||||  | ||||||||||||||||||||||| |||||||||
Sbjct: 119320 tgtattgcacaccagcttcattaacagcatcatgttcaagtatgcagtgccccaatagca 119379

                                                                          
Query: 211    gtctaatgcttggtaatatgactagccagcccaccagtggtggctgtggtgtctcgtctt 270
                || |||||||| ||| |||||  |||  ||||||||||||| ||   |||||| ||||
Sbjct: 119380 acctcatgcttgggaatgtgactgcccaatccaccagtggtggatgcaatgtctcatctt 119439

                           
Query: 271    gcagctatgctgg 283
              |||||||||||||
Sbjct: 119440 gcagctatgctgg 119452



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 396    tcataccttgctccgtcgccttcgccaggacctggggaggc 436
              |||||||||||||| || ||| | |||||| ||||||||||
Sbjct: 120367 tcataccttgctccatcacctgcaccaggagctggggaggc 120407



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>ref|NM_106411.3| Arabidopsis thaliana unknown protein AT1G77630 mRNA, complete cds
          Length = 1684

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 323  tcttcaacctacatgccctggaccgcatcaatt 355
            ||||||||||  ||||||||||||||| |||||
Sbjct: 1220 tcttcaacctcgatgccctggaccgcaacaatt 1252



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>gb|BT010885.1| Arabidopsis thaliana At1g77630 gene, complete cds
          Length = 1272

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 323 tcttcaacctacatgccctggaccgcatcaatt 355
           ||||||||||  ||||||||||||||| |||||
Sbjct: 951 tcttcaacctcgatgccctggaccgcaacaatt 983



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>ref|XM_506077.1| Yarrowia lipolytica CLIB122, YALI0F31031g predicted mRNA
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 443  cgctgttcctggctcgtccga 463
            |||||||||||||||||||||
Sbjct: 1185 cgctgttcctggctcgtccga 1205



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>emb|BX817126.1|CNS0ABRH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH87ZC01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1690

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 323  tcttcaacctacatgccctggaccgcatcaatt 355
            ||||||||||  ||||||||||||||| |||||
Sbjct: 1226 tcttcaacctcgatgccctggaccgcaacaatt 1258



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>dbj|AK176769.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein,
            complete cds, clone: RAFL25-31-O10
          Length = 1628

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 323  tcttcaacctacatgccctggaccgcatcaatt 355
            ||||||||||  ||||||||||||||| |||||
Sbjct: 1198 tcttcaacctcgatgccctggaccgcaacaatt 1230



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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 443     cgctgttcctggctcgtccga 463
               |||||||||||||||||||||
Sbjct: 3870300 cgctgttcctggctcgtccga 3870320



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>gb|DQ196238.1| Puccinia graminis f. sp. tritici hypothetical class III chitin
           synthase (chsIIIa) gene, exons 1 through 16 and complete
           cds
          Length = 5252

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 347 gcatcaatttcctccactgat 367
           |||||||||||||||||||||
Sbjct: 603 gcatcaatttcctccactgat 623



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>gb|AC121309.10| Mus musculus chromosome 3, clone RP24-303N8, complete sequence
          Length = 179337

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    tgttcaagtatgcagtgctc 202
              ||||||||||||||||||||
Sbjct: 164020 tgttcaagtatgcagtgctc 164001



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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
              sequence
          Length = 1507550

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    tacatgccctggaccgcatc 351
              ||||||||||||||||||||
Sbjct: 741526 tacatgccctggaccgcatc 741507



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>ref|XM_363100.1| Magnaporthe grisea 70-15 predicted protein (MG08684.4) partial cds
          Length = 600

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 ggccggtggcgctgttcctg 453
           ||||||||||||||||||||
Sbjct: 475 ggccggtggcgctgttcctg 456



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>ref|XM_570989.1| Cryptococcus neoformans var. neoformans JEC21 tRNA binding protein
           (CNE02810) partial mRNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 tacatgccctggaccgcatc 351
           ||||||||||||||||||||
Sbjct: 308 tacatgccctggaccgcatc 289



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>gb|AC123026.4| Mus musculus BAC clone RP24-549O22 from chromosome 3, complete sequence
          Length = 175610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tgttcaagtatgcagtgctc 202
             ||||||||||||||||||||
Sbjct: 16700 tgttcaagtatgcagtgctc 16681



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>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence
          Length = 212273

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    tcaatttcctccactgatgg 369
              ||||||||||||||||||||
Sbjct: 208610 tcaatttcctccactgatgg 208591



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>gb|AC098887.4| Mus musculus BAC clone RP23-122N6 from 10, complete sequence
          Length = 211397

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    tcaatttcctccactgatgg 369
              ||||||||||||||||||||
Sbjct: 160215 tcaatttcctccactgatgg 160234



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>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence
          Length = 218508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    caccagtggtggctgtggtg 261
              ||||||||||||||||||||
Sbjct: 186261 caccagtggtggctgtggtg 186280



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>emb|AL080248.7|HSBA19D2 Human DNA sequence from clone RP11-19D2 on chromosome 20 Contains the a
              novel gene and the 5' end of a novel gene, complete
              sequence
          Length = 166913

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tgtggaatgcagttgtgggc 135
              ||||||||||||||||||||
Sbjct: 139889 tgtggaatgcagttgtgggc 139908



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>emb|AL356605.20| Human DNA sequence from clone RP11-414G18 on chromosome 6 Contains part
             of the TCBA1 gene for T-cell lymphoma breakpoint
             associated target 1, complete sequence
          Length = 169493

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   gatcctcattctttctttag 549
             ||||||||||||||||||||
Sbjct: 88542 gatcctcattctttctttag 88561



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>ref|XM_778518.1| PREDICTED: Strongylocentrotus purpuratus similar to
            1-phosphatidylinositol-4,5-bisphosphate
            phosphodiesterase-like 4 (Phosphoinositide phospholipase
            C-like 4) (Phospholipase C-like 4) (LOC578345), mRNA
          Length = 8178

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 527  aatgatcctcattctttctt 546
            ||||||||||||||||||||
Sbjct: 4549 aatgatcctcattctttctt 4530



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>emb|AL591851.12| Mouse DNA sequence from clone RP23-43M4 on chromosome 13 Contains a
             novel gene, an X-linked lymphocyte-regulated 5 (Xlr5)
             pseudogene and the 5' end of the gene for novel protein
             similar to human C6orf32 (KIAA0386, DIFF48), complete
             sequence
          Length = 53867

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   agcattgccacatcgctatc 316
             ||||||||||||||||||||
Sbjct: 24859 agcattgccacatcgctatc 24840



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>gb|AC021055.18| Homo sapiens 3 BAC RP11-139K4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156754

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 564   atgtgaattcttctgtagga 583
             ||||||||||||||||||||
Sbjct: 47672 atgtgaattcttctgtagga 47653



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>emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chromosome 2, complete
             sequence
          Length = 163577

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   caggtcttcaacctacatgc 338
             ||||||||||||||||||||
Sbjct: 60919 caggtcttcaacctacatgc 60938



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>gb|AC153553.4| Mus musculus 10 BAC RP23-329D17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 185583

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    caccagtggtggctgtggtg 261
              ||||||||||||||||||||
Sbjct: 151921 caccagtggtggctgtggtg 151902



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>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence
          Length = 207067

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 404  tgctccgtcgccttcgccag 423
            ||||||||||||||||||||
Sbjct: 8473 tgctccgtcgccttcgccag 8454



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       acgtttcctaactttgcttc 61
                ||||||||||||||||||||
Sbjct: 22897179 acgtttcctaactttgcttc 22897198



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 435    gccggtggcgctgttcctgg 454
              ||||||||||||||||||||
Sbjct: 517064 gccggtggcgctgttcctgg 517083



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ctggcaactgtgtggaatgc 125
              ||||||||||||||||||||
Sbjct: 901424 ctggcaactgtgtggaatgc 901443



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       acgtttcctaactttgcttc 61
                ||||||||||||||||||||
Sbjct: 22825370 acgtttcctaactttgcttc 22825389



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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   acgtttcctaactttgcttc 61
            ||||||||||||||||||||
Sbjct: 6456 acgtttcctaactttgcttc 6475



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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    acgtttcctaactttgcttc 61
             ||||||||||||||||||||
Sbjct: 59665 acgtttcctaactttgcttc 59646



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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     tagccagcccaccagtggtg 252
               ||||||||||||||||||||
Sbjct: 2323886 tagccagcccaccagtggtg 2323905



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>dbj|AB035665.1| Branchiostoma belcheri AmphiMRLC mRNA for myosin regulatory light
           chain, complete cds
          Length = 1136

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 540 ctttctttagtcttctacct 559
           ||||||||||||||||||||
Sbjct: 590 ctttctttagtcttctacct 571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,711,039
Number of Sequences: 3902068
Number of extensions: 4711039
Number of successful extensions: 81500
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81279
Number of HSP's gapped (non-prelim): 221
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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