Clone Name | baal13a17 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db | 30 | 2.0 | 2 | DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A ... | 29 | 2.7 | 3 | MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd | 28 | 4.5 | 4 | MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc | 28 | 4.5 | 5 | KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-as... | 28 | 7.8 |
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>MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db| Length = 74 Score = 29.6 bits (65), Expect = 2.0 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -1 Query: 96 CRPCGASPRSCG*CRPWC 43 C PCG CG CRP+C Sbjct: 55 CGPCGPCGPCCGPCRPYC 72 Score = 28.5 bits (62), Expect = 4.5 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = -1 Query: 99 CCRPCGASPRSCG*CRPW--CC 40 CC PCG+ CG C P CC Sbjct: 31 CCSPCGSCCAPCGPCGPCGPCC 52
>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2207 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -1 Query: 93 RPCGASPRSCG*CRPWCCPYFXXE 22 R G+ P S RPWCCP+ E Sbjct: 2096 RGSGSGPDSATSSRPWCCPFCQTE 2119
>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd| Length = 72 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/19 (52%), Positives = 10/19 (52%) Frame = -1 Query: 99 CCRPCGASPRSCG*CRPWC 43 CC PCG CG C P C Sbjct: 39 CCGPCGPRCGPCGPCGPCC 57
>MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc| Length = 55 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -1 Query: 96 CRPCGASPRSCG*CRPWCCPY 34 C PCG+ CG C P C P+ Sbjct: 26 CGPCGSCCGPCGPCGPCCGPF 46
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = -1 Query: 99 CCRPCGASPRSC--G*CRPWCC 40 CC+P PR C CRP CC Sbjct: 94 CCQPTCCRPRCCISSCCRPSCC 115 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%) Frame = -1 Query: 99 CCRPCGASPRSC--G*CRPWCC 40 CC+P PR C CRP CC Sbjct: 59 CCQPTCCRPRCCISSCCRPSCC 80 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,448,036 Number of Sequences: 219361 Number of extensions: 112679 Number of successful extensions: 632 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 630 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)