ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal13a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db 30 2.0
2DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A ... 29 2.7
3MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd 28 4.5
4MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc 28 4.5
5KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-as... 28 7.8

>MS84B_DROME (Q01643) Male-specific sperm protein Mst84Db|
          Length = 74

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 96  CRPCGASPRSCG*CRPWC 43
           C PCG     CG CRP+C
Sbjct: 55  CGPCGPCGPCCGPCRPYC 72



 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -1

Query: 99 CCRPCGASPRSCG*CRPW--CC 40
          CC PCG+    CG C P   CC
Sbjct: 31 CCSPCGSCCAPCGPCGPCGPCC 52



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>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2207

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 93   RPCGASPRSCG*CRPWCCPYFXXE 22
            R  G+ P S    RPWCCP+   E
Sbjct: 2096 RGSGSGPDSATSSRPWCCPFCQTE 2119



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>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd|
          Length = 72

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -1

Query: 99 CCRPCGASPRSCG*CRPWC 43
          CC PCG     CG C P C
Sbjct: 39 CCGPCGPRCGPCGPCGPCC 57



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>MS84C_DROME (Q01644) Male-specific sperm protein Mst84Dc|
          Length = 55

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 96 CRPCGASPRSCG*CRPWCCPY 34
          C PCG+    CG C P C P+
Sbjct: 26 CGPCGSCCGPCGPCGPCCGPF 46



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>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated|
           protein 4.14) (Ultrahigh sulfur keratin-associated
           protein 4.14)
          Length = 195

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -1

Query: 99  CCRPCGASPRSC--G*CRPWCC 40
           CC+P    PR C    CRP CC
Sbjct: 94  CCQPTCCRPRCCISSCCRPSCC 115



 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -1

Query: 99  CCRPCGASPRSC--G*CRPWCC 40
           CC+P    PR C    CRP CC
Sbjct: 59  CCQPTCCRPRCCISSCCRPSCC 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,448,036
Number of Sequences: 219361
Number of extensions: 112679
Number of successful extensions: 632
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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