ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal15o12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK110932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 414 e-112
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 240 4e-60
3dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 240 4e-60
4dbj|AB107360.1| Oryza sativa (japonica cultivar-group) DNA, STS ... 127 5e-26
5gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.52
6gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.52
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
8gb|AC173470.3| Dasypus novemcinctus clone VMRC5-164N1, complete ... 44 0.52
9gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 2.1
10emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.1
11ref|XM_624992.1| PREDICTED: Apis mellifera similar to hypothetic... 42 2.1
12emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.1
13emb|AL157791.4|CNS01RG8 Human chromosome 14 DNA sequence BAC R-6... 42 2.1
14gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 2.1
15gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.2
16gb|DQ487109.1| Panax ginseng dehydrin 4 (Dhn4) mRNA, complete cds 40 8.2
17emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 ma... 40 8.2
18gb|AC123543.3| Lemur catta clone LB2-212N12, complete sequence 40 8.2
19gb|AC092830.7| Homo sapiens 12 BAC RP11-146L7 (Roswell Park Canc... 40 8.2
20gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, compl... 40 8.2
21emb|AL139382.12| Human DNA sequence from clone RP11-86N24 on chr... 40 8.2
22ref|XM_961563.1| PREDICTED: Tribolium castaneum similar to apopt... 40 8.2
23gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.2
24gb|AC087312.8| Homo sapiens 12p BAC RP11-615I16 (Roswell Park Ca... 40 8.2
25gb|AC092306.2| Homo sapiens chromosome 19 clone LLNLR-231D4, com... 40 8.2
26gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.2
27gb|DP000004.1| Lemur catta target 1 genomic scaffold 40 8.2
28gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosom... 40 8.2
29gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.2
30gb|AC016723.11| Homo sapiens BAC clone RP11-334N15 from 2, compl... 40 8.2
31gb|L34832.1|TKYP21CBP Meleagris gallopavo clacium binding protei... 40 8.2
32emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chro... 40 8.2

>dbj|AK110932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F11, full
           insert sequence
          Length = 1425

 Score =  414 bits (209), Expect = e-112
 Identities = 457/539 (84%), Gaps = 3/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 38  gagatgctcgcggccgcggctgtgagccaggtcgcccgcaagatcggcgaaatcatcggc 97
           |||||||| | ||||||||| ||||||||||||||||| ||||||  ||  ||| |||||
Sbjct: 69  gagatgcttgtggccgcggcggtgagccaggtcgcccggaagatcaacggcatcgtcggc 128

                                                                       
Query: 98  gcggcgcagggcgaggtcacgctgtgctgcagtttcagcgacgatctggagagcataaag 157
           |  |||||||||||||| | ||||||||||| ||||||||||||| ||||| |||| |||
Sbjct: 129 gtcgcgcagggcgaggtgaagctgtgctgcaatttcagcgacgatttggagggcatcaag 188

                                                                       
Query: 158 gacactctggtgtacctagaagacctgctgaaaaatgcggagaggaactccttcggaagc 217
           || ||  |||||||||| |||  ||| |||||||| || ||||  |||||||||||||||
Sbjct: 189 gataccttggtgtacctggaaacccttctgaaaaacgccgagaacaactccttcggaagc 248

                                                                       
Query: 218 gagagggcgaacctgcggcactggctcacccagatcaagtccctggccttcgacatcgaa 277
           || ||||| |||||||| |||||||||  |||||||||||||||||| | ||||||||||
Sbjct: 249 gacagggccaacctgcgacactggctcggccagatcaagtccctggcttacgacatcgaa 308

                                                                       
Query: 278 gacatggttgacgactactactcttccaaggagcagtttgaagggagcagcagctatgct 337
           || || ||||| |  ||||||||||||||||||||||| || |||    |||||||||||
Sbjct: 309 gatatcgttgatgggtactactcttccaaggagcagttcgatggg---ggcagctatgct 365

                                                                       
Query: 338 cagaagggatcattgttctgctcactttccaatcctgtgatttcgaaagttagcatggtt 397
           |||||||| ||||| ||||||||||| || |||||  || ||  ||||| ||||||||||
Sbjct: 366 cagaaggggtcattattctgctcactatcgaatccaatgcttctgaaaggtagcatggtt 425

                                                                       
Query: 398 cataagatgaaatccaagagagagttgttgcagacaaggcaacacttgcctaatcaatat 457
            |||||||||| |||||||| ||| |||| |||  ||||||||| ||||| ||||| |||
Sbjct: 426 tataagatgaagtccaagagggagatgttacagcaaaggcaacaattgcccaatcagtat 485

                                                                       
Query: 458 catttcatttcacatattaactcagtggtggattttgatgagaagcaaacaacatcatac 517
           |||||| |||||||||| |||||||  ||| ||||||| |||||||||||||||||||||
Sbjct: 486 catttcctttcacatatcaactcagcagtgaattttgaggagaagcaaacaacatcatac 545

                                                                      
Query: 518 agaaatagtgacattactcttttcgggagagatagagacttagaaaatctcatggacat 576
           ||||||| ||||||| |  || | ||||| |||  ||||||||| ||||||||||||||
Sbjct: 546 agaaatactgacattgcaattgttgggagggatgcagacttagataatctcatggacat 604



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  240 bits (121), Expect = 4e-60
 Identities = 261/307 (85%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                           
Query: 38      gagatgctcgcggccgcggctgtgagccaggtcgcccgcaagatcggcgaaatcatcggc 97
               |||||||| | ||||||||| ||||||||||||||||| ||||||  ||  ||| |||||
Sbjct: 9621754 gagatgcttgtggccgcggcggtgagccaggtcgcccggaagatcaacggcatcgtcggc 9621695

                                                                           
Query: 98      gcggcgcagggcgaggtcacgctgtgctgcagtttcagcgacgatctggagagcataaag 157
               |  |||||||||||||| | ||||||||||| ||||||||||||| ||||| |||| |||
Sbjct: 9621694 gtcgcgcagggcgaggtgaagctgtgctgcaatttcagcgacgatttggagggcatcaag 9621635

                                                                           
Query: 158     gacactctggtgtacctagaagacctgctgaaaaatgcggagaggaactccttcggaagc 217
               || ||  |||||||||| |||  ||| |||||||| || ||||  |||||||||||||||
Sbjct: 9621634 gataccttggtgtacctggaaacccttctgaaaaacgccgagaacaactccttcggaagc 9621575

                                                                           
Query: 218     gagagggcgaacctgcggcactggctcacccagatcaagtccctggccttcgacatcgaa 277
               || ||||| |||||||| |||||||||  |||||||||||||||||| | ||||||||||
Sbjct: 9621574 gacagggccaacctgcgacactggctcggccagatcaagtccctggcttacgacatcgaa 9621515

                                                                           
Query: 278     gacatggttgacgactactactcttccaaggagcagtttgaagggagcagcagctatgct 337
               || || ||||| |  ||||||||||||||||||||||| || |||    |||||||||||
Sbjct: 9621514 gatatcgttgatgggtactactcttccaaggagcagttcgatggg---ggcagctatgct 9621458

                      
Query: 338     cagaagg 344
               |||||||
Sbjct: 9621457 cagaagg 9621451



 Score =  180 bits (91), Expect = 3e-42
 Identities = 199/235 (84%)
 Strand = Plus / Minus

                                                                           
Query: 342     agggatcattgttctgctcactttccaatcctgtgatttcgaaagttagcatggttcata 401
               |||| ||||| ||||||||||| || |||||  || ||  ||||| |||||||||| |||
Sbjct: 9620430 aggggtcattattctgctcactatcgaatccaatgcttctgaaaggtagcatggtttata 9620371

                                                                           
Query: 402     agatgaaatccaagagagagttgttgcagacaaggcaacacttgcctaatcaatatcatt 461
               ||||||| |||||||| ||| |||| |||  ||||||||| ||||| ||||| |||||||
Sbjct: 9620370 agatgaagtccaagagggagatgttacagcaaaggcaacaattgcccaatcagtatcatt 9620311

                                                                           
Query: 462     tcatttcacatattaactcagtggtggattttgatgagaagcaaacaacatcatacagaa 521
               || |||||||||| |||||||  ||| ||||||| |||||||||||||||||||||||||
Sbjct: 9620310 tcctttcacatatcaactcagcagtgaattttgaggagaagcaaacaacatcatacagaa 9620251

                                                                      
Query: 522     atagtgacattactcttttcgggagagatagagacttagaaaatctcatggacat 576
               ||| ||||||| |  || | ||||| |||  ||||||||| ||||||||||||||
Sbjct: 9620250 atactgacattgcaattgttgggagggatgcagacttagataatctcatggacat 9620196



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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score =  240 bits (121), Expect = 4e-60
 Identities = 261/307 (85%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                         
Query: 38    gagatgctcgcggccgcggctgtgagccaggtcgcccgcaagatcggcgaaatcatcggc 97
             |||||||| | ||||||||| ||||||||||||||||| ||||||  ||  ||| |||||
Sbjct: 61851 gagatgcttgtggccgcggcggtgagccaggtcgcccggaagatcaacggcatcgtcggc 61792

                                                                         
Query: 98    gcggcgcagggcgaggtcacgctgtgctgcagtttcagcgacgatctggagagcataaag 157
             |  |||||||||||||| | ||||||||||| ||||||||||||| ||||| |||| |||
Sbjct: 61791 gtcgcgcagggcgaggtgaagctgtgctgcaatttcagcgacgatttggagggcatcaag 61732

                                                                         
Query: 158   gacactctggtgtacctagaagacctgctgaaaaatgcggagaggaactccttcggaagc 217
             || ||  |||||||||| |||  ||| |||||||| || ||||  |||||||||||||||
Sbjct: 61731 gataccttggtgtacctggaaacccttctgaaaaacgccgagaacaactccttcggaagc 61672

                                                                         
Query: 218   gagagggcgaacctgcggcactggctcacccagatcaagtccctggccttcgacatcgaa 277
             || ||||| |||||||| |||||||||  |||||||||||||||||| | ||||||||||
Sbjct: 61671 gacagggccaacctgcgacactggctcggccagatcaagtccctggcttacgacatcgaa 61612

                                                                         
Query: 278   gacatggttgacgactactactcttccaaggagcagtttgaagggagcagcagctatgct 337
             || || ||||| |  ||||||||||||||||||||||| || |||    |||||||||||
Sbjct: 61611 gatatcgttgatgggtactactcttccaaggagcagttcgatggg---ggcagctatgct 61555

                    
Query: 338   cagaagg 344
             |||||||
Sbjct: 61554 cagaagg 61548



 Score =  180 bits (91), Expect = 3e-42
 Identities = 199/235 (84%)
 Strand = Plus / Minus

                                                                         
Query: 342   agggatcattgttctgctcactttccaatcctgtgatttcgaaagttagcatggttcata 401
             |||| ||||| ||||||||||| || |||||  || ||  ||||| |||||||||| |||
Sbjct: 60527 aggggtcattattctgctcactatcgaatccaatgcttctgaaaggtagcatggtttata 60468

                                                                         
Query: 402   agatgaaatccaagagagagttgttgcagacaaggcaacacttgcctaatcaatatcatt 461
             ||||||| |||||||| ||| |||| |||  ||||||||| ||||| ||||| |||||||
Sbjct: 60467 agatgaagtccaagagggagatgttacagcaaaggcaacaattgcccaatcagtatcatt 60408

                                                                         
Query: 462   tcatttcacatattaactcagtggtggattttgatgagaagcaaacaacatcatacagaa 521
             || |||||||||| |||||||  ||| ||||||| |||||||||||||||||||||||||
Sbjct: 60407 tcctttcacatatcaactcagcagtgaattttgaggagaagcaaacaacatcatacagaa 60348

                                                                    
Query: 522   atagtgacattactcttttcgggagagatagagacttagaaaatctcatggacat 576
             ||| ||||||| |  || | ||||| |||  ||||||||| ||||||||||||||
Sbjct: 60347 atactgacattgcaattgttgggagggatgcagacttagataatctcatggacat 60293



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>dbj|AB107360.1| Oryza sativa (japonica cultivar-group) DNA, STS marker, clone:
            ARIF1AK
          Length = 1662

 Score =  127 bits (64), Expect = 5e-26
 Identities = 162/194 (83%), Gaps = 3/194 (1%)
 Strand = Plus / Minus

                                                                        
Query: 342  agggatcattgttctgctcactttccaatcctgtgatttcgaaagttagcatggttcata 401
            |||| ||||| |||||||| || ||||||||  || ||  ||||| |||||||||| |||
Sbjct: 1092 aggggtcattattctgctcgctatccaatccaatgcttctgaaaggtagcatggtttata 1033

                                                                        
Query: 402  agatgaaatccaagagagagttgttgcagacaaggcaacacttgcctaatcaatatcatt 461
            |||||||||||||||||||| || | |||  ||| ||||| ||||| ||||| |||||||
Sbjct: 1032 agatgaaatccaagagagagatgctacagcaaagccaacagttgcccaatcagtatcatt 973

                                                                        
Query: 462  tcatttcacatattaactcagtggtg---gattttgatgagaagcaaacaacatcataca 518
            || ||||| |||| || ||||  |||    ||||||| ||||||||||||||||||||||
Sbjct: 972  tcctttcatatatcaattcagctgtgcattattttgaggagaagcaaacaacatcataca 913

                          
Query: 519  gaaatagtgacatt 532
            |||||| |||||||
Sbjct: 912  gaaatactgacatt 899



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>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0079H23, complete sequence
          Length = 191765

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 474   ttaactcagtggtggattttga 495
             ||||||||||||||||||||||
Sbjct: 53858 ttaactcagtggtggattttga 53879



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>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03,
              complete sequence
          Length = 177861

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 474    ttaactcagtggtggattttga 495
              ||||||||||||||||||||||
Sbjct: 110286 ttaactcagtggtggattttga 110307



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 474      ttaactcagtggtggattttga 495
                ||||||||||||||||||||||
Sbjct: 27178890 ttaactcagtggtggattttga 27178911



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>gb|AC173470.3| Dasypus novemcinctus clone VMRC5-164N1, complete sequence
          Length = 75140

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 469   acatattaactcagtggtggat 490
             ||||||||||||||||||||||
Sbjct: 27623 acatattaactcagtggtggat 27602



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 74     cgcaagatcggcgaaatcatcggcg 98
              |||||||||||||| ||||||||||
Sbjct: 320857 cgcaagatcggcgacatcatcggcg 320881



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 74      cgcaagatcggcgaaatcatcggcg 98
               |||||||||||||| ||||||||||
Sbjct: 1646660 cgcaagatcggcgacatcatcggcg 1646684



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>ref|XM_624992.1| PREDICTED: Apis mellifera similar to hypothetical protein
            (LOC552618), mRNA
          Length = 2418

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 489  attttgatgagaagcaaacaa 509
            |||||||||||||||||||||
Sbjct: 1659 attttgatgagaagcaaacaa 1639



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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 93      tcggcgcggcgcagggcgagg 113
               |||||||||||||||||||||
Sbjct: 2862471 tcggcgcggcgcagggcgagg 2862491



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>emb|AL157791.4|CNS01RG8 Human chromosome 14 DNA sequence BAC R-647O20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 191960

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   atatcatttcatttcacatat 474
             |||||||||||||||||||||
Sbjct: 39048 atatcatttcatttcacatat 39068



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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 74      cgcaagatcggcgaaatcatcggcg 98
               |||||||||||||| ||||||||||
Sbjct: 1404855 cgcaagatcggcgacatcatcggcg 1404831



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     agatcggcgaaatcatcggc 97
              ||||||||||||||||||||
Sbjct: 906467 agatcggcgaaatcatcggc 906448



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>gb|DQ487109.1| Panax ginseng dehydrin 4 (Dhn4) mRNA, complete cds
          Length = 1076

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 atcaatatcatttcatttca 469
           ||||||||||||||||||||
Sbjct: 1   atcaatatcatttcatttca 20



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>emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 map Xq28, complete
             sequence
          Length = 189430

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 502   gcaaacaacatcatacagaaatag 525
             |||||||||||||| |||||||||
Sbjct: 88280 gcaaacaacatcattcagaaatag 88257



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>gb|AC123543.3| Lemur catta clone LB2-212N12, complete sequence
          Length = 203201

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   aaacaacatcatacagaaat 523
             ||||||||||||||||||||
Sbjct: 46594 aaacaacatcatacagaaat 46575



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>gb|AC092830.7| Homo sapiens 12 BAC RP11-146L7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 164969

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    aaaatctcatggacatgata 580
              ||||||||||||||||||||
Sbjct: 145232 aaaatctcatggacatgata 145213



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>gb|AC127316.3| Mus musculus BAC clone RP23-222G16 from 13, complete sequence
          Length = 203032

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    catacagaaatagtgacatt 532
              ||||||||||||||||||||
Sbjct: 180519 catacagaaatagtgacatt 180538



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>emb|AL139382.12| Human DNA sequence from clone RP11-86N24 on chromosome 13 Contains the
             TNFSF11 gene for tumor necrosis factor (ligand)
             superfamily, member 11 and a CpG island, complete sequence
          Length = 200724

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   gagagatagagacttagaaa 563
             ||||||||||||||||||||
Sbjct: 69457 gagagatagagacttagaaa 69476



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>ref|XM_961563.1| PREDICTED: Tribolium castaneum similar to apoptosis antagonizing
           transcription factor (LOC655070), mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 504 aaacaacatcatacagaaat 523
           ||||||||||||||||||||
Sbjct: 927 aaacaacatcatacagaaat 946



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      gcaagatcggcgaaatcatc 94
               ||||||||||||||||||||
Sbjct: 4876759 gcaagatcggcgaaatcatc 4876778



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>gb|AC087312.8| Homo sapiens 12p BAC RP11-615I16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148543

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    aaaatctcatggacatgata 580
              ||||||||||||||||||||
Sbjct: 136734 aaaatctcatggacatgata 136753



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>gb|AC092306.2| Homo sapiens chromosome 19 clone LLNLR-231D4, complete sequence
          Length = 35144

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  ctgctcactttccaatcctg 374
            ||||||||||||||||||||
Sbjct: 7376 ctgctcactttccaatcctg 7357



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 92      atcggcgcggcgcagggcga 111
               ||||||||||||||||||||
Sbjct: 1880994 atcggcgcggcgcagggcga 1881013



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>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 504     aaacaacatcatacagaaat 523
               ||||||||||||||||||||
Sbjct: 1051937 aaacaacatcatacagaaat 1051918



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>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence
          Length = 193594

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 513    catacagaaatagtgacatt 532
              ||||||||||||||||||||
Sbjct: 182430 catacagaaatagtgacatt 182411



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 75      gcaagatcggcgaaatcatc 94
               ||||||||||||||||||||
Sbjct: 1224697 gcaagatcggcgaaatcatc 1224678



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>gb|AC016723.11| Homo sapiens BAC clone RP11-334N15 from 2, complete sequence
          Length = 202001

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ctttccaatcctgtgatttc 381
             ||||||||||||||||||||
Sbjct: 15013 ctttccaatcctgtgatttc 15032



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>gb|L34832.1|TKYP21CBP Meleagris gallopavo clacium binding protein (p21) mRNA, 3' end
          Length = 628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 91  catcggcgcggcgcagggcg 110
           ||||||||||||||||||||
Sbjct: 188 catcggcgcggcgcagggcg 169



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>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete
             sequence
          Length = 142174

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   taaaggacactctggtgtac 172
             ||||||||||||||||||||
Sbjct: 29678 taaaggacactctggtgtac 29659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,312,590
Number of Sequences: 3902068
Number of extensions: 5312590
Number of successful extensions: 105629
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104910
Number of HSP's gapped (non-prelim): 712
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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