ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal28a18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1468 Score = 153 bits (77), Expect = 4e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 2 cggacgaccaacaccgacctggaggcggcggacctggacggtgaccggcgcgtgggggcg 61 ||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 950 cggaccaccaacatggacctggaggcggcggacctcgacggcgaccaccgcgtcggggcc 1009 Query: 62 gcggagttcgtgctgtacaagctcaaagagctcgggaagatcagccaggaggagatctcg 121 || || |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 1010 gccgacttcgtgctgtacaagctcaaggagctcggcaagatcagccaggaggacatatcg 1069 Query: 122 gagttcatggaggagttcgacgagctcgacgccgaccacaatggcacgctgtccccctca 181 |||||| | || ||||||||| | ||||||||||| ||| ||||| || |||||| | Sbjct: 1070 gagttcctcgacgagttcgacaacctcgacgccgatcactccggcaccctctcccccgcc 1129 Query: 182 gacctcgcc 190 ||||||||| Sbjct: 1130 gacctcgcc 1138
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 153 bits (77), Expect = 4e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 2 cggacgaccaacaccgacctggaggcggcggacctggacggtgaccggcgcgtgggggcg 61 ||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 467235 cggaccaccaacatggacctggaggcggcggacctcgacggcgaccaccgcgtcggggcc 467294 Query: 62 gcggagttcgtgctgtacaagctcaaagagctcgggaagatcagccaggaggagatctcg 121 || || |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 467295 gccgacttcgtgctgtacaagctcaaggagctcggcaagatcagccaggaggacatatcg 467354 Query: 122 gagttcatggaggagttcgacgagctcgacgccgaccacaatggcacgctgtccccctca 181 |||||| | || ||||||||| | ||||||||||| ||| ||||| || |||||| | Sbjct: 467355 gagttcctcgacgagttcgacaacctcgacgccgatcactccggcaccctctcccccgcc 467414 Query: 182 gacctcgcc 190 ||||||||| Sbjct: 467415 gacctcgcc 467423
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 153 bits (77), Expect = 4e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 2 cggacgaccaacaccgacctggaggcggcggacctggacggtgaccggcgcgtgggggcg 61 ||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 69399 cggaccaccaacatggacctggaggcggcggacctcgacggcgaccaccgcgtcggggcc 69458 Query: 62 gcggagttcgtgctgtacaagctcaaagagctcgggaagatcagccaggaggagatctcg 121 || || |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 69459 gccgacttcgtgctgtacaagctcaaggagctcggcaagatcagccaggaggacatatcg 69518 Query: 122 gagttcatggaggagttcgacgagctcgacgccgaccacaatggcacgctgtccccctca 181 |||||| | || ||||||||| | ||||||||||| ||| ||||| || |||||| | Sbjct: 69519 gagttcctcgacgagttcgacaacctcgacgccgatcactccggcaccctctcccccgcc 69578 Query: 182 gacctcgcc 190 ||||||||| Sbjct: 69579 gacctcgcc 69587
>dbj|AK109604.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-F01, full insert sequence Length = 1468 Score = 153 bits (77), Expect = 4e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 2 cggacgaccaacaccgacctggaggcggcggacctggacggtgaccggcgcgtgggggcg 61 ||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 950 cggaccaccaacatggacctggaggcggcggacctcgacggcgaccaccgcgtcggggcc 1009 Query: 62 gcggagttcgtgctgtacaagctcaaagagctcgggaagatcagccaggaggagatctcg 121 || || |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 1010 gccgacttcgtgctgtacaagctcaaggagctcggcaagatcagccaggaggacatatcg 1069 Query: 122 gagttcatggaggagttcgacgagctcgacgccgaccacaatggcacgctgtccccctca 181 |||||| | || ||||||||| | ||||||||||| ||| ||||| || |||||| | Sbjct: 1070 gagttcctcgacgagttcgacaacctcgacgccgatcactccggcaccctctcccccgcc 1129 Query: 182 gacctcgcc 190 ||||||||| Sbjct: 1130 gacctcgcc 1138
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 153 bits (77), Expect = 4e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 2 cggacgaccaacaccgacctggaggcggcggacctggacggtgaccggcgcgtgggggcg 61 ||||| ||||||| |||||||||||||||||||| ||||| |||| ||||| ||||| Sbjct: 21147 cggaccaccaacatggacctggaggcggcggacctcgacggcgaccaccgcgtcggggcc 21206 Query: 62 gcggagttcgtgctgtacaagctcaaagagctcgggaagatcagccaggaggagatctcg 121 || || |||||||||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct: 21207 gccgacttcgtgctgtacaagctcaaggagctcggcaagatcagccaggaggacatatcg 21266 Query: 122 gagttcatggaggagttcgacgagctcgacgccgaccacaatggcacgctgtccccctca 181 |||||| | || ||||||||| | ||||||||||| ||| ||||| || |||||| | Sbjct: 21267 gagttcctcgacgagttcgacaacctcgacgccgatcactccggcaccctctcccccgcc 21326 Query: 182 gacctcgcc 190 ||||||||| Sbjct: 21327 gacctcgcc 21335
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 75 tgtacaagctcaaagagctcgggaagatcagcca 108 |||||||||||||||| || |||||||||||||| Sbjct: 92727 tgtacaagctcaaagaactggggaagatcagcca 92694
>gb|AY770627.1| Hordeum vulgare subsp. vulgare outward-rectifying potassium channel (KCO1) mRNA, complete cds Length = 1385 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 75 tgtacaagctcaaagagctcgggaagatcagcca 108 |||||||||||||||| || |||||||||||||| Sbjct: 984 tgtacaagctcaaagaactggggaagatcagcca 1017
>ref|XM_469784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1289 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Plus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 908 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 950
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Plus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 81034 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 81076
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Minus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 30722749 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 30722707
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Plus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 39641 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 39683
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Minus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 31450 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 31408
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Minus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 30814173 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 30814131
>dbj|AK069303.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012L24, full insert sequence Length = 1674 Score = 46.1 bits (23), Expect = 0.071 Identities = 38/43 (88%) Strand = Plus / Plus Query: 75 tgtacaagctcaaagagctcgggaagatcagccaggaggagat 117 |||||||||||||||| || || ||||||| ||| |||||||| Sbjct: 1293 tgtacaagctcaaagaactgggtaagatcaaccaagaggagat 1335
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 ccgacctggaggcggcggacct 36 |||||||||||||||||||||| Sbjct: 154412 ccgacctggaggcggcggacct 154391
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ggtgaccggcgcgtgggggcgg 62 |||||||||||||||||||||| Sbjct: 120617 ggtgaccggcgcgtgggggcgg 120596 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 41 ggtgaccggcgcgtgggggcgg 62 |||||||||||||||||||||| Sbjct: 6633 ggtgaccggcgcgtgggggcgg 6654
>gb|M69065.1|HS2LAT Herpes simplex virus type 2 ORF1, ORF2, and ORF3 (LAT) gene, complete cds Length = 3312 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ggtgaccggcgcgtgggggcgg 62 |||||||||||||||||||||| Sbjct: 1354 ggtgaccggcgcgtgggggcgg 1333
>dbj|D10471.1|HS2ULIR Herpes simplex virus type 2 genomic DNA for 0.74-0.84 region, complete cds Length = 13680 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ggtgaccggcgcgtgggggcgg 62 |||||||||||||||||||||| Sbjct: 6986 ggtgaccggcgcgtgggggcgg 6965
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 16857 aagatcagccaggaggagatc 16837
>ref|XM_480535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2031 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 1648 aagatcagccaggaggagatc 1668
>ref|XM_475261.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 1684 aagatcagccaggaggagatc 1704
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 ggagttcgacgagctcgacgccgac 157 ||||||| ||||||||||||||||| Sbjct: 322994 ggagttctacgagctcgacgccgac 323018
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 145880 aagatcagccaggaggagatc 145860
>ref|XM_838083.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0999) partial mRNA Length = 12525 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 ggagttcgacgagctcgacgccgac 157 ||||||| ||||||||||||||||| Sbjct: 11010 ggagttctacgagctcgacgccgac 11034
>gb|DQ397607.1| Cenarchaeum symbiosum clone C12A09, complete sequence Length = 38974 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 110 gaggagatctcggagttcatggaggagtt 138 ||||||||||||| |||||| |||||||| Sbjct: 1099 gaggagatctcggggttcatagaggagtt 1071
>gb|AF403738.1|AF403738 Culex nigripalpus baculovirus, complete genome Length = 108252 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 gcggacctggacggtgaccgg 49 ||||||||||||||||||||| Sbjct: 47275 gcggacctggacggtgaccgg 47295
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 5639802 aagatcagccaggaggagatc 5639782
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 20890079 aagatcagccaggaggagatc 20890059
>gb|AC122764.12| Mus musculus chromosome 15, clone RP24-93B16, complete sequence Length = 209493 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gacagagagctcattgtcaaa 286 ||||||||||||||||||||| Sbjct: 17004 gacagagagctcattgtcaaa 16984
>gb|AC122783.16| Mus musculus chromosome 15, clone RP24-224O11, complete sequence Length = 178493 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gacagagagctcattgtcaaa 286 ||||||||||||||||||||| Sbjct: 174511 gacagagagctcattgtcaaa 174491
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 95178 aagatcagccaggaggagatc 95158
>dbj|AK119815.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-A09, full insert sequence Length = 2879 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 cgacgagctcgacgccgacca 159 ||||||||||||||||||||| Sbjct: 949 cgacgagctcgacgccgacca 969
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 166030 aagatcagccaggaggagatc 166010
>dbj|AK106696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D06, full insert sequence Length = 2273 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 aagatcagccaggaggagatc 118 ||||||||||||||||||||| Sbjct: 1717 aagatcagccaggaggagatc 1737
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 185 ctcgccatcgcgcaggccaccattt 209 ||||||||||||||||||| ||||| Sbjct: 3366797 ctcgccatcgcgcaggccatcattt 3366821
>gb|AE010309.1| Methanopyrus kandleri AV19 section 8 of 157 of the complete genome Length = 12442 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 ggagatctcggagttcatggagga 135 |||||||||||||||| ||||||| Sbjct: 10877 ggagatctcggagttcctggagga 10854
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gagttcgacgagctcgacgc 153 |||||||||||||||||||| Sbjct: 127465 gagttcgacgagctcgacgc 127446
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 agctcgggaagatcagccaggaggagat 117 |||||||||| ||||||||||| ||||| Sbjct: 3571056 agctcgggaatatcagccaggacgagat 3571083
>gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosome 5, complete sequence Length = 200934 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 agagagctcattgtcaaaga 288 |||||||||||||||||||| Sbjct: 144247 agagagctcattgtcaaaga 144266
>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence Length = 238781 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 agagagctcattgtcaaaga 288 |||||||||||||||||||| Sbjct: 227089 agagagctcattgtcaaaga 227108
>gb|AC125045.4| Mus musculus BAC clone RP23-349M7 from chromosome 9, complete sequence Length = 205064 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tgaaaaattgtgtgtatttt 322 |||||||||||||||||||| Sbjct: 191668 tgaaaaattgtgtgtatttt 191649
>gb|AC124456.5| Mus musculus BAC clone RP24-134C11 from chromosome 9, complete sequence Length = 148114 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tgaaaaattgtgtgtatttt 322 |||||||||||||||||||| Sbjct: 46666 tgaaaaattgtgtgtatttt 46647
>gb|AY745025.1| Phomopsis sp. OH-48 calmodulin gene, partial cds Length = 515 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 354 acgaggtcgacgccgacaacaatggcac 381
>gb|BC092724.1| Danio rerio zgc:110084, mRNA (cDNA clone MGC:110084 IMAGE:7283460), complete cds Length = 969 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agttcatggaggagttcgac 142 |||||||||||||||||||| Sbjct: 518 agttcatggaggagttcgac 537
>ref|NM_001017579.1| Danio rerio zgc:110084 (zgc:110084), mRNA Length = 969 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 agttcatggaggagttcgac 142 |||||||||||||||||||| Sbjct: 518 agttcatggaggagttcgac 537
>gb|DQ018871.1| Hasora khoda wingless (Wgl) gene, partial cds Length = 399 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccaacaccgacctggaggcg 28 |||||||||||||||||||| Sbjct: 99 ccaacaccgacctggaggcg 118
>gb|AC018799.8| Homo sapiens BAC clone RP11-125N8 from 2, complete sequence Length = 151107 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 aagtaagtggtgaaaaattg 312 |||||||||||||||||||| Sbjct: 134771 aagtaagtggtgaaaaattg 134790
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 gagttcgacgagctcgacgccgaccaca 161 |||||||||||| ||||||||| ||||| Sbjct: 4777265 gagttcgacgagatcgacgccggccaca 4777292
>ref|XM_319887.2| Anopheles gambiae str. PEST ENSANGP00000010636 (ENSANGG00000008147), partial mRNA Length = 2565 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccaacaccgacctggaggcg 28 |||||||||||||||||||| Sbjct: 605 ccaacaccgacctggaggcg 624
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ctggaggcggcggacctgga 39 |||||||||||||||||||| Sbjct: 995633 ctggaggcggcggacctgga 995614
>gb|AY109841.1| Zea mays CL20008_1 mRNA sequence Length = 740 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gctcaaagagctcgggaaga 101 |||||||||||||||||||| Sbjct: 533 gctcaaagagctcgggaaga 514
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcgacgagctcgacgccgac 157 |||||||||||||||||||| Sbjct: 620977 tcgacgagctcgacgccgac 620996
>gb|AF034964.1|AF034964 Glomerella cingulata calmodulin (cam) mRNA, complete cds Length = 450 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 161 acgaggtcgacgccgacaacaatggcac 188
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 caacaccgacctggaggcggcgga 33 ||||| |||||||||||||||||| Sbjct: 852572 caacatcgacctggaggcggcgga 852595
>gb|AY720812.1| Wuestneia molokaiensis strain CBS 114877 calmodulin (cal) gene, partial cds Length = 473 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 334 acgaggtcgacgccgacaacaatggcac 361
>gb|AY720808.1| Harknessia eucalypti strain CBS 342.97 calmodulin (cal) gene, partial cds Length = 474 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 335 acgaggtcgacgccgacaacaatggcac 362
>gb|AY720799.1| Harknessia protearum strain CBS 111831 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720798.1| Harknessia protearum strain CBS 111830 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720797.1| Harknessia protearum strain CBS 112616 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720796.1| Harknessia protearum strain CBS 112617 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720795.1| Harknessia protearum strain CBS 112618 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720794.1| Harknessia leucospermi strain CBS 112619 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720793.1| Harknessia leucospermi strain CBS 112620 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720792.1| Harknessia leucospermi strain CPC 5400 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720791.1| Harknessia leucospermi strain CPC 2849 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720790.1| Harknessia leucospermi strain CBS 775.97 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720789.1| Harknessia hawaiiensis strain CBS 111122 calmodulin (cal) gene, partial cds Length = 474 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 335 acgaggtcgacgccgacaacaatggcac 362
>gb|AY720788.1| Harknessia hawaiiensis strain CBS 110728 calmodulin (cal) gene, partial cds Length = 474 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 335 acgaggtcgacgccgacaacaatggcac 362
>gb|AY720787.1| Harknessia hawaiiensis strain CBS 115650 calmodulin (cal) gene, partial cds Length = 474 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 335 acgaggtcgacgccgacaacaatggcac 362
>gb|AY720786.1| Harknessia hawaiiensis strain CBS 114811 calmodulin (cal) gene, partial cds Length = 474 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 335 acgaggtcgacgccgacaacaatggcac 362
>gb|AY720785.1| Harknessia globispora strain CBS 111578 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720782.1| Harknessia capensis strain CBS 111829 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>gb|AY720781.1| Harknessia capensis strain CBS 115061 calmodulin (cal) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 141 acgagctcgacgccgaccacaatggcac 168 ||||| ||||||||||| |||||||||| Sbjct: 336 acgaggtcgacgccgacaacaatggcac 363
>dbj|AB257140.1| Glyphodes apiospila wg gene for wingless, partial cds Length = 399 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ccaacaccgacctggaggcg 28 |||||||||||||||||||| Sbjct: 107 ccaacaccgacctggaggcg 126 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,547,897 Number of Sequences: 3902068 Number of extensions: 2547897 Number of successful extensions: 56081 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55402 Number of HSP's gapped (non-prelim): 679 length of query: 333 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 311 effective length of database: 17,147,199,772 effective search space: 5332779129092 effective search space used: 5332779129092 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
