Clone Name | baal28a18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KCO1_ARATH (Q8LBL1) Calcium-activated outward-rectifying potassi... | 70 | 2e-12 | 2 | KCO3_ARATH (Q9XFR0) Probable calcium-activated outward-rectifyin... | 38 | 0.007 | 3 | KCO6_ARATH (Q9SVV6) Probable calcium-activated outward-rectifyin... | 35 | 0.036 | 4 | KCO2_ARATH (Q9FL25) Probable calcium-activated outward-rectifyin... | 32 | 0.39 | 5 | SPE2A_STRPU (P04110) SPEC 2A protein | 30 | 1.5 | 6 | PRVU_CHICK (P43305) Parvalbumin, thymic CPV3 (Parvalbumin 3) | 28 | 4.4 | 7 | SPE2C_STRPU (P04111) SPEC 2C protein | 27 | 9.7 |
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>KCO1_ARATH (Q8LBL1) Calcium-activated outward-rectifying potassium channel 1| (AtKCO1) Length = 363 Score = 69.7 bits (169), Expect = 2e-12 Identities = 36/68 (52%), Positives = 43/68 (63%) Frame = +2 Query: 2 RTTNTDLEAADLDGDRRVGAAEFVLYKLKELGKXXXXXXXXXXXXXXXLDADHNGTLSPS 181 R TN DLEAADLD D VGAAEF++YKLKE+GK LD D +GTL+ S Sbjct: 291 RITNNDLEAADLDEDGVVGAAEFIVYKLKEMGKIDEKDISGIMDEFEQLDYDESGTLTTS 350 Query: 182 DLAIAQAT 205 D+ +AQ T Sbjct: 351 DIVLAQTT 358
>KCO3_ARATH (Q9XFR0) Probable calcium-activated outward-rectifying potassium| channel 3 (AtKCO3) Length = 260 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +2 Query: 26 AADLDGDRRVGAAEFVLYKLKELGKXXXXXXXXXXXXXXXLDADHNGTLSPSDLAIA 196 AAD+D D R+ AEF +YKLK++ K LD +G ++ DL A Sbjct: 201 AADIDNDGRLSLAEFAIYKLKQMEKITQEDFIQICNQFDKLDRTQSGRITLVDLTTA 257
>KCO6_ARATH (Q9SVV6) Probable calcium-activated outward-rectifying potassium| channel 6 (AtKCO6) Length = 436 Score = 35.4 bits (80), Expect = 0.036 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = +2 Query: 26 AADLDGDRRVGAAEFVLYKLKELGKXXXXXXXXXXXXXXXLDADHNGTLSPSDL 187 AAD+D + V AE+V+YKLKE+ K LD NG ++ DL Sbjct: 376 AADIDNNGCVSKAEYVIYKLKEMEKITDKDILPISKQFDKLDRCSNGKITLLDL 429
>KCO2_ARATH (Q9FL25) Probable calcium-activated outward-rectifying potassium| channel 2 (AtKCO2) Length = 443 Score = 32.0 bits (71), Expect = 0.39 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +2 Query: 29 ADLDGDRRVGAAEFVLYKLKELGKXXXXXXXXXXXXXXXLDADHNGTLSPSDL 187 AD+D + V AEFV+YKLK++ K LD ++G ++ DL Sbjct: 377 ADIDCNGCVSKAEFVIYKLKKMDKITEKDINPIGFQFDKLDRTNSGRITLLDL 429
>SPE2A_STRPU (P04110) SPEC 2A protein| Length = 150 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = +2 Query: 32 DLDGDRRVGAAEFVLYKLKELGKXXXXXXXXXXXXXXXLDADHNGTLSPSDLAIAQA 202 D DG + + +EF++ K ++ LD DHNG+LSP +L A + Sbjct: 59 DKDGSKDMDFSEFLMRKAEQW----RGREVQLTKAFVDLDKDHNGSLSPQELRTAMS 111
>PRVU_CHICK (P43305) Parvalbumin, thymic CPV3 (Parvalbumin 3)| Length = 109 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = +2 Query: 8 TNTDLEAADLDGDRRVGAAEF 70 T T L AAD DGD ++GA EF Sbjct: 83 TKTFLAAADHDGDGKIGAEEF 103
>SPE2C_STRPU (P04111) SPEC 2C protein| Length = 151 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +2 Query: 20 LEAADLDGDRRVGAAEFVLYKLKEL-GKXXXXXXXXXXXXXXXLDADHNGTLSPSDLAIA 196 + D DG R V +E ++ K +++ GK LD D +G+LSP +L A Sbjct: 55 MSMVDKDGSRPVDFSEILMKKAEQMRGKGAQYFKAFDA-----LDTDKSGSLSPEELRTA 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,439,918 Number of Sequences: 219361 Number of extensions: 514657 Number of successful extensions: 999 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 983 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 999 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)