ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
3dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
4dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
5dbj|AK121622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
6emb|AL355597.19| Human DNA sequence from clone RP11-358N3 on chr... 44 0.53
7gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complet... 42 2.1
8ref|XM_422297.1| PREDICTED: Gallus gallus prostaglandin synthase... 42 2.1
9gb|AY330623.1| Human papillomavirus type 71 isolate Qv23143, com... 42 2.1
10gb|AY330622.1| Human papillomavirus type 71 isolate Qv22945, com... 42 2.1
11gb|AY330620.1| Human papillomavirus type 71 isolate Qv21030, com... 42 2.1
12gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 42 2.1
13emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chro... 42 2.1
14gb|AC093311.2| Homo sapiens chromosome 5 clone RP11-461G12, comp... 42 2.1
15gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, comple... 42 2.1
16gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, comple... 42 2.1
17emb|CR386218.1| Gallus gallus finished cDNA, clone ChEST253h1 42 2.1
18gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K1... 42 2.1
19gb|AC138601.5| Mus musculus chromosome 5, clone RP23-49G7, compl... 42 2.1
20gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, co... 42 2.1
21gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, compl... 42 2.1
22dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
23dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
24emb|AJ331656.1|HSA331656 Homo sapiens genomic sequence surroundi... 42 2.1
25gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 ... 42 2.1
26emb|CR854913.13| Zebrafish DNA sequence from clone DKEY-18P14 in... 42 2.1
27gb|AY330621.1| Human papillomavirus type 71 isolate Qv22792, com... 42 2.1
28gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome... 42 2.1
29gb|M64990.1|CHKPSYN Chicken prostaglandin G/H synthase mRNA, com... 42 2.1
30dbj|AB040456.1| Human papillomavirus type 71 DNA, complete genome 42 2.1
31dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds 42 2.1
32ref|NM_104585.2| Arabidopsis thaliana DNA binding AT1G58025 mRNA... 40 8.2
33gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosom... 40 8.2
34gb|BC098678.1| Rattus norvegicus serine/threonine/tyrosine inter... 40 8.2
35emb|AL023835.1|CEY37A1B Caenorhabditis elegans YAC Y37A1B, compl... 40 8.2
36ref|NM_001037788.1| Rattus norvegicus serine/threonine/tyrosine ... 40 8.2
37gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, compl... 40 8.2
38gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, comple... 40 8.2
39ref|XM_644033.1| Entamoeba histolytica HM-1:IMSS WD repeat prote... 40 8.2
40gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complet... 40 8.2
41gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete se... 40 8.2
42emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chro... 40 8.2
43emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chr... 40 8.2
44emb|AL135912.7| Human DNA sequence from clone RP3-447N10 on chro... 40 8.2
45emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in... 40 8.2
46emb|BX927217.5| Zebrafish DNA sequence from clone DKEY-8J20 in l... 40 8.2
47gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Ca... 40 8.2
48gb|AC151426.32| Medicago truncatula clone mth2-6o22, complete se... 40 8.2
49gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, comp... 40 8.2
50gb|AC093862.3| Homo sapiens BAC clone RP11-549C16 from 4, comple... 40 8.2
51gb|AF448250.1| Bacteroides sp. 139 plasmid p139EF putative resol... 40 8.2
52gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence 40 8.2
53gb|AC090893.5| Homo sapiens chromosome 11, clone RP11-390G21, co... 40 8.2
54emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, c... 40 8.2
55gb|AC092239.1|AC092239 Drosophila melanogaster, chromosome 2L, r... 40 8.2
56gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19,... 40 8.2
57gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, r... 40 8.2
58gb|AC016759.11| Homo sapiens BAC clone RP11-535J8 from 2, comple... 40 8.2
59gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15... 40 8.2
60gb|BC040612.1| Homo sapiens, clone IMAGE:5539086, mRNA 40 8.2
61gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, c... 40 8.2
62gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56... 40 8.2
63gb|AE003611.3| Drosophila melanogaster chromosome 2L, section 20... 40 8.2
64gb|AC005333.1|AC005333 Drosophila melanogaster DNA sequence (P1s... 40 8.2
65emb|AL935319.8| Zebrafish DNA sequence from clone DKEY-56L2 in l... 40 8.2
66gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complet... 40 8.2 
>dbj|AK064330.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F11, full
            insert sequence
          Length = 2229

 Score =  129 bits (65), Expect = 1e-26
 Identities = 131/153 (85%)
 Strand = Plus / Plus

                                                                        
Query: 154  caagtatcacattttcaatacatacttcttcaagaaacttgaagccctaaaatcaaagga 213
            ||||||||| ||||||||||||||||||||||  |||||||||||| | | |||||||| 
Sbjct: 961  caagtatcatattttcaatacatacttcttcagcaaacttgaagccttgacatcaaaggt 1020

                                                                        
Query: 214  agacaagtgttcttatttcttaaacctgagaagatggtggaaaggcatagatatatttca 273
             |||||   | |||||||||| || ||||||||||||||||||||  ||||||||||| |
Sbjct: 1021 ggacaatgatgcttatttcttgaatctgagaagatggtggaaaggtgtagatatatttaa 1080

                                             
Query: 274  aatgccatatatattatttcctgtgcatgcaga 306
            || | |||| ||| || ||||||||||||||||
Sbjct: 1081 aaaggcatacataataattcctgtgcatgcaga 1113



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 49  tgacataaaatgccttgagcctgaatcgttactttcctcacctataatgaacttctacat 108
           |||||| || || |||||||||||||| ||  | |||||||||||| |||||||||||||
Sbjct: 856 tgacatgaagtgtcttgagcctgaatcattgttgtcctcacctatactgaacttctacat 915

                    
Query: 109 tatgtacct 117
           |||||||||
Sbjct: 916 tatgtacct 924
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                            
Query: 225      cttatttcttaaacctgagaagatggtggaaaggcatagatatatttcaaatgccatata 284
                |||||||||| || ||||||||||||||||||||  ||||||||||| ||| | |||| |
Sbjct: 16518901 cttatttcttgaatctgagaagatggtggaaaggtgtagatatatttaaaaaggcataca 16518842

                                                      
Query: 285      tattatttcctgtgcatgcagagtaagcaattttgttg 322
                || || ||||||||||||||||||||||||||||||||
Sbjct: 16518841 taataattcctgtgcatgcagagtaagcaattttgttg 16518804



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 154      caagtatcacattttcaatacatacttcttcaagaaacttgaagccctaaaatcaaagg 212
                ||||||||| ||||||||||||||||||||||  |||||||||||| | | ||||||||
Sbjct: 16519973 caagtatcatattttcaatacatacttcttcagcaaacttgaagccttgacatcaaagg 16519915



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                            
Query: 49       tgacataaaatgccttgagcctgaatcgttactttcctcacctataatgaacttctacat 108
                |||||| || || |||||||||||||| ||  | |||||||||||| |||||||||||||
Sbjct: 16521231 tgacatgaagtgtcttgagcctgaatcattgttgtcctcacctatactgaacttctacat 16521172

                      
Query: 109      tatgta 114
                ||||||
Sbjct: 16521171 tatgta 16521166



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 444     aatttacatgtttatagaata 464
               |||||||||||||||||||||
Sbjct: 4038147 aatttacatgtttatagaata 4038167
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>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0583E12
          Length = 152449

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                         
Query: 225   cttatttcttaaacctgagaagatggtggaaaggcatagatatatttcaaatgccatata 284
             |||||||||| || ||||||||||||||||||||  ||||||||||| ||| | |||| |
Sbjct: 14881 cttatttcttgaatctgagaagatggtggaaaggtgtagatatatttaaaaaggcataca 14822

                                                   
Query: 285   tattatttcctgtgcatgcagagtaagcaattttgttg 322
             || || ||||||||||||||||||||||||||||||||
Sbjct: 14821 taataattcctgtgcatgcagagtaagcaattttgttg 14784



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 154   caagtatcacattttcaatacatacttcttcaagaaacttgaagccctaaaatcaaagg 212
             ||||||||| ||||||||||||||||||||||  |||||||||||| | | ||||||||
Sbjct: 15953 caagtatcatattttcaatacatacttcttcagcaaacttgaagccttgacatcaaagg 15895



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                         
Query: 49    tgacataaaatgccttgagcctgaatcgttactttcctcacctataatgaacttctacat 108
             |||||| || || |||||||||||||| ||  | |||||||||||| |||||||||||||
Sbjct: 17211 tgacatgaagtgtcttgagcctgaatcattgttgtcctcacctatactgaacttctacat 17152

                   
Query: 109   tatgta 114
             ||||||
Sbjct: 17151 tatgta 17146
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>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0404G03
          Length = 135225

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 225    cttatttcttaaacctgagaagatggtggaaaggcatagatatatttcaaatgccatata 284
              |||||||||| || ||||||||||||||||||||  ||||||||||| ||| | |||| |
Sbjct: 128219 cttatttcttgaatctgagaagatggtggaaaggtgtagatatatttaaaaaggcataca 128160

                                                    
Query: 285    tattatttcctgtgcatgcagagtaagcaattttgttg 322
              || || ||||||||||||||||||||||||||||||||
Sbjct: 128159 taataattcctgtgcatgcagagtaagcaattttgttg 128122



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 154    caagtatcacattttcaatacatacttcttcaagaaacttgaagccctaaaatcaaagg 212
              ||||||||| ||||||||||||||||||||||  |||||||||||| | | ||||||||
Sbjct: 129291 caagtatcatattttcaatacatacttcttcagcaaacttgaagccttgacatcaaagg 129233



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                          
Query: 49     tgacataaaatgccttgagcctgaatcgttactttcctcacctataatgaacttctacat 108
              |||||| || || |||||||||||||| ||  | |||||||||||| |||||||||||||
Sbjct: 130549 tgacatgaagtgtcttgagcctgaatcattgttgtcctcacctatactgaacttctacat 130490

                    
Query: 109    tatgta 114
              ||||||
Sbjct: 130489 tatgta 130484
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>dbj|AK121622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045C16, full
            insert sequence
          Length = 4278

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                        
Query: 225  cttatttcttaaacctgagaagatggtggaaaggcatagatatatttcaaatgccatata 284
            |||||||||| || ||||||||||||||||||||  ||||||||||| ||| | |||| |
Sbjct: 3081 cttatttcttgaatctgagaagatggtggaaaggtgtagatatatttaaaaaggcataca 3140

                                  
Query: 285  tattatttcctgtgcatgcaga 306
            || || ||||||||||||||||
Sbjct: 3141 taataattcctgtgcatgcaga 3162



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                        
Query: 49   tgacataaaatgccttgagcctgaatcgttactttcctcacctataatgaacttctacat 108
            |||||| || || |||||||||||||| ||  | |||||||||||| |||||||||||||
Sbjct: 2964 tgacatgaagtgtcttgagcctgaatcattgttgtcctcacctatactgaacttctacat 3023

                     
Query: 109  tatgtacct 117
            |||||||||
Sbjct: 3024 tatgtacct 3032
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>emb|AL355597.19| Human DNA sequence from clone RP11-358N3 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 89340

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 469   atatattgtatcttttgagatt 490
             ||||||||||||||||||||||
Sbjct: 69331 atatattgtatcttttgagatt 69352
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>gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complete sequence
          Length = 169856

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   atcacattttcaatacatact 179
             |||||||||||||||||||||
Sbjct: 35424 atcacattttcaatacatact 35444
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>ref|XM_422297.1| PREDICTED: Gallus gallus prostaglandin synthase (LOC396451), mRNA
          Length = 4173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 201  taaaatcaaaggaagacaagt 221
            |||||||||||||||||||||
Sbjct: 3841 taaaatcaaaggaagacaagt 3861
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>gb|AY330623.1| Human papillomavirus type 71 isolate Qv23143, complete genome
          Length = 8038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  aatattgtatatattgtatct 481
            |||||||||||||||||||||
Sbjct: 3871 aatattgtatatattgtatct 3891
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>gb|AY330622.1| Human papillomavirus type 71 isolate Qv22945, complete genome
          Length = 8031

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  aatattgtatatattgtatct 481
            |||||||||||||||||||||
Sbjct: 3871 aatattgtatatattgtatct 3891
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>gb|AY330620.1| Human papillomavirus type 71 isolate Qv21030, complete genome
          Length = 8037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  aatattgtatatattgtatct 481
            |||||||||||||||||||||
Sbjct: 3871 aatattgtatatattgtatct 3891
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>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 209    aaggaagacaagtgttcttatttcttaaa 237
              |||| |||||||||||||||| |||||||
Sbjct: 207023 aagggagacaagtgttcttatgtcttaaa 207051
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>emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chromosome 9 Contains a
             pseudogene similar to part of beta tubulin, the MTAP gene
             for methylthioadenosine phosphorylase (MSAP), a novel gene
             and a CpG island, complete sequence
          Length = 168656

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 195   aagccctaaaatcaaaggaagacaa 219
             |||||||||||| ||||||||||||
Sbjct: 58006 aagccctaaaataaaaggaagacaa 57982
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>gb|AC093311.2| Homo sapiens chromosome 5 clone RP11-461G12, complete sequence
          Length = 178887

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 451   atgtttatagaatattgtatatatt 475
             ||||||||||||||||||| |||||
Sbjct: 60916 atgtttatagaatattgtaaatatt 60892
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>gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, complete sequence
          Length = 110931

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tttcctcacctataatgaact 101
             |||||||||||||||||||||
Sbjct: 44349 tttcctcacctataatgaact 44369
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>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence
          Length = 163384

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 81     tttcctcacctataatgaact 101
              |||||||||||||||||||||
Sbjct: 134961 tttcctcacctataatgaact 134941
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>emb|CR386218.1| Gallus gallus finished cDNA, clone ChEST253h1
          Length = 1143

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 201 taaaatcaaaggaagacaagt 221
           |||||||||||||||||||||
Sbjct: 811 taaaatcaaaggaagacaagt 831
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>gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K17, complete sequence
          Length = 103522

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tttcctcacctataatgaact 101
             |||||||||||||||||||||
Sbjct: 28648 tttcctcacctataatgaact 28668
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>gb|AC138601.5| Mus musculus chromosome 5, clone RP23-49G7, complete sequence
          Length = 129690

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 448   tacatgtttatagaatattgtatat 472
             |||||||| ||||||||||||||||
Sbjct: 47440 tacatgttgatagaatattgtatat 47464
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>gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, complete sequence
          Length = 193386

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 448    tacatgtttatagaatattgtatat 472
              |||||||| ||||||||||||||||
Sbjct: 185502 tacatgttgatagaatattgtatat 185526
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>gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, complete sequence
          Length = 122322

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    tttcctcacctataatgaact 101
             |||||||||||||||||||||
Sbjct: 58420 tttcctcacctataatgaact 58400
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>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0019L07
          Length = 131650

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 444   aatttacatgtttatagaata 464
             |||||||||||||||||||||
Sbjct: 81802 aatttacatgtttatagaata 81822
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>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0035I03
          Length = 153749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 444    aatttacatgtttatagaata 464
              |||||||||||||||||||||
Sbjct: 144023 aatttacatgtttatagaata 144043
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>emb|AJ331656.1|HSA331656 Homo sapiens genomic sequence surrounding NotI site, clone
           NL3-CE10C
          Length = 626

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 486 agattcttataacttctactc 506
           |||||||||||||||||||||
Sbjct: 447 agattcttataacttctactc 467
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>gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 of 74 of the complete
              sequence
          Length = 302073

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    atcacattttcaatacatact 179
              |||||||||||||||||||||
Sbjct: 289280 atcacattttcaatacatact 289260
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>emb|CR854913.13| Zebrafish DNA sequence from clone DKEY-18P14 in linkage group 5,
             complete sequence
          Length = 99265

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 268   atttcaaatgccatatatattattt 292
             |||||||||| ||||||||||||||
Sbjct: 10981 atttcaaatgtcatatatattattt 11005
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>gb|AY330621.1| Human papillomavirus type 71 isolate Qv22792, complete genome
          Length = 8026

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  aatattgtatatattgtatct 481
            |||||||||||||||||||||
Sbjct: 3871 aatattgtatatattgtatct 3891
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>gb|AC171681.1| Mus musculus BAC clone RP24-530O2 from chromosome 14, complete sequence
          Length = 198038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 209   aaggaagacaagtgttcttatttcttaaa 237
             |||| |||||||||||||||| |||||||
Sbjct: 43538 aagggagacaagtgttcttatgtcttaaa 43566
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>gb|M64990.1|CHKPSYN Chicken prostaglandin G/H synthase mRNA, complete cds
          Length = 4698

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 201  taaaatcaaaggaagacaagt 221
            |||||||||||||||||||||
Sbjct: 4366 taaaatcaaaggaagacaagt 4386
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>dbj|AB040456.1| Human papillomavirus type 71 DNA, complete genome
          Length = 8017

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 461  aatattgtatatattgtatct 481
            |||||||||||||||||||||
Sbjct: 3867 aatattgtatatattgtatct 3887
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>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds
          Length = 250000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 195   aagccctaaaatcaaaggaagacaa 219
             |||||||||||| ||||||||||||
Sbjct: 18006 aagccctaaaataaaaggaagacaa 17982
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>ref|NM_104585.2| Arabidopsis thaliana DNA binding AT1G58025 mRNA, complete cds
          Length = 1818

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  agaagatggtggaaaggcat 261
            ||||||||||||||||||||
Sbjct: 987  agaagatggtggaaaggcat 1006
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>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete
             sequence
          Length = 212576

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 185   aagaaacttgaagccctaaaatca 208
             |||||||||||| |||||||||||
Sbjct: 86665 aagaaacttgaaaccctaaaatca 86688
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>gb|BC098678.1| Rattus norvegicus serine/threonine/tyrosine interacting-like 1,
           mRNA (cDNA clone MGC:112640 IMAGE:7382696), complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ttttatagaacttcacctca 404
           ||||||||||||||||||||
Sbjct: 741 ttttatagaacttcacctca 760
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>emb|AL023835.1|CEY37A1B Caenorhabditis elegans YAC Y37A1B, complete sequence
          Length = 99083

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 269  tttcaaatgccatatatattatttcctg 296
            |||||| ||||||||||||| |||||||
Sbjct: 5270 tttcaactgccatatatattttttcctg 5297
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>ref|NM_001037788.1| Rattus norvegicus serine/threonine/tyrosine interacting-like 1
           (Styxl1), mRNA
          Length = 1306

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ttttatagaacttcacctca 404
           ||||||||||||||||||||
Sbjct: 741 ttttatagaacttcacctca 760
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>gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, complete sequence
          Length = 178929

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   atcttttgagattcttataa 497
             ||||||||||||||||||||
Sbjct: 86850 atcttttgagattcttataa 86869
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>gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, complete sequence
          Length = 176259

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  tagatatatttcaaatgcca 280
            ||||||||||||||||||||
Sbjct: 7528 tagatatatttcaaatgcca 7547
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>ref|XM_644033.1| Entamoeba histolytica HM-1:IMSS WD repeat protein (341.t00009)
           partial mRNA
          Length = 1218

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 88  acctataatgaacttctacattat 111
           ||||||||| ||||||||||||||
Sbjct: 322 acctataatcaacttctacattat 299
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>gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complete sequence
          Length = 160626

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 264   atatatttcaaatgccatatatat 287
             |||||| |||||||||||||||||
Sbjct: 38136 atatatatcaaatgccatatatat 38159
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>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence
          Length = 116909

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   tgtattttgataaaatgcaa 426
             ||||||||||||||||||||
Sbjct: 51844 tgtattttgataaaatgcaa 51825
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>emb|AL359853.18| Human DNA sequence from clone RP11-12M5 on chromosome 1 Contains five
              novel genes and a CpG island, complete sequence
          Length = 173031

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    aaaatgcaattgagtttgaa 437
              ||||||||||||||||||||
Sbjct: 133454 aaaatgcaattgagtttgaa 133473
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>emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chromosome 10 Contains the
             5' end of the MGMT gene for O-6-methylguanine-DNA
             methyltransferase, complete sequence
          Length = 213887

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    aatcgttactttcctcacctataa 95
             |||| |||||||||||||||||||
Sbjct: 38698 aatccttactttcctcacctataa 38721
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>emb|AL135912.7| Human DNA sequence from clone RP3-447N10 on chromosome 6 Contains a CpG
             island, complete sequence
          Length = 90577

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   aaatgccatatatattattt 292
             ||||||||||||||||||||
Sbjct: 56839 aaatgccatatatattattt 56858
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>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19,
           complete sequence
          Length = 138519

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 tatttcaaatgccatatata 286
           ||||||||||||||||||||
Sbjct: 723 tatttcaaatgccatatata 704
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>emb|BX927217.5| Zebrafish DNA sequence from clone DKEY-8J20 in linkage group 19,
            complete sequence
          Length = 10464

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 267  tatttcaaatgccatatata 286
            ||||||||||||||||||||
Sbjct: 9187 tatttcaaatgccatatata 9168
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>gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 123587

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cattttcaatacatacttct 182
              ||||||||||||||||||||
Sbjct: 116429 cattttcaatacatacttct 116410
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>gb|AC151426.32| Medicago truncatula clone mth2-6o22, complete sequence
          Length = 116955

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gagtttgaaggtggaaattt 448
             ||||||||||||||||||||
Sbjct: 85586 gagtttgaaggtggaaattt 85605
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>gb|AC107621.2| Homo sapiens chromosome 3 clone RP11-632N21, complete sequence
          Length = 153582

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 433   ttgaaggtggaaatttacatgttt 456
             ||||||||||| ||||||||||||
Sbjct: 15058 ttgaaggtggacatttacatgttt 15081
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>gb|AC093862.3| Homo sapiens BAC clone RP11-549C16 from 4, complete sequence
          Length = 172195

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   ttcttataacttctactcat 508
             ||||||||||||||||||||
Sbjct: 73879 ttcttataacttctactcat 73898
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>gb|AF448250.1| Bacteroides sp. 139 plasmid p139EF putative resolvase, putative C-5
            cytosine-specific DNA methylase, putative HylD secretion
            protein, and putative ABC transporter protein genes,
            complete cds; and unknown gene
          Length = 6395

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 462  atattgtatatattgtatcttttg 485
            ||||||||||||||||||| ||||
Sbjct: 2322 atattgtatatattgtatcatttg 2299
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>gb|AC018375.8| Homo sapiens, clone RP11-3P24, complete sequence
          Length = 149951

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   attgtatcttttgagattct 492
             ||||||||||||||||||||
Sbjct: 74795 attgtatcttttgagattct 74776
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>gb|AC090893.5| Homo sapiens chromosome 11, clone RP11-390G21, complete sequence
          Length = 191524

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   attgtatcttttgagattct 492
             ||||||||||||||||||||
Sbjct: 39368 attgtatcttttgagattct 39387
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>emb|AL954812.14| Zebrafish DNA sequence from clone DKEY-50G15, complete sequence
          Length = 192304

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   agcaattttgttgtctctttcgct 333
             |||||||||||||||| |||||||
Sbjct: 53360 agcaattttgttgtctgtttcgct 53383
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>gb|AC092239.1|AC092239 Drosophila melanogaster, chromosome 2L, region 25F-26X, BAC clone
             BACR48E14, complete sequence
          Length = 166441

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 463   tattgtatatattgtatcttttga 486
             ||||||| ||||||||||||||||
Sbjct: 86370 tattgtagatattgtatcttttga 86347
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>gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19, complete sequence
          Length = 164417

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 579    atcagttagcattttgaaaa 598
              ||||||||||||||||||||
Sbjct: 114315 atcagttagcattttgaaaa 114334
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>gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, region 90A-90B, BAC clone
              BACR29H07, complete sequence
          Length = 175440

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    tttagattggtattgctttt 365
              ||||||||||||||||||||
Sbjct: 110824 tttagattggtattgctttt 110805
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>gb|AC016759.11| Homo sapiens BAC clone RP11-535J8 from 2, complete sequence
          Length = 219574

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    aattaatacacaaagagaca 155
              ||||||||||||||||||||
Sbjct: 170716 aattaatacacaaagagaca 170697
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>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete
             sequence
          Length = 103637

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   agaagatggtggaaaggcat 261
             ||||||||||||||||||||
Sbjct: 21278 agaagatggtggaaaggcat 21259
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>gb|BC040612.1| Homo sapiens, clone IMAGE:5539086, mRNA
          Length = 2323

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  aaatgccatatatattattt 292
            ||||||||||||||||||||
Sbjct: 1207 aaatgccatatatattattt 1226
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>gb|AC105957.13| Mus musculus chromosome 18, clone RP24-303O20, complete sequence
          Length = 167570

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   aagaaacttgaagccctaaaatca 208
             |||||||||||||| |||||||||
Sbjct: 47072 aagaaacttgaagcactaaaatca 47049
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>gb|AE003718.3| Drosophila melanogaster chromosome 3R, section 56 of 118 of the
             complete sequence
          Length = 253101

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 346   tttagattggtattgctttt 365
             ||||||||||||||||||||
Sbjct: 24910 tttagattggtattgctttt 24891
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>gb|AE003611.3| Drosophila melanogaster chromosome 2L, section 20 of 83 of the complete
              sequence
          Length = 260731

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 463    tattgtatatattgtatcttttga 486
              ||||||| ||||||||||||||||
Sbjct: 212328 tattgtagatattgtatcttttga 212305
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>gb|AC005333.1|AC005333 Drosophila melanogaster DNA sequence (P1s DS06477 (D116) and DS03026
             (D126)), complete sequence
          Length = 94797

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 463   tattgtatatattgtatcttttga 486
             ||||||| ||||||||||||||||
Sbjct: 10179 tattgtagatattgtatcttttga 10202
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>emb|AL935319.8| Zebrafish DNA sequence from clone DKEY-56L2 in linkage group 18,
             complete sequence
          Length = 106806

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   tatttcaaatgccatatata 286
             ||||||||||||||||||||
Sbjct: 94030 tatttcaaatgccatatata 94011
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>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence
          Length = 175691

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tagatatatttcaaatgcca 280
             ||||||||||||||||||||
Sbjct: 26240 tagatatatttcaaatgcca 26221


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,617,441
Number of Sequences: 3902068
Number of extensions: 7617441
Number of successful extensions: 164860
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 164564
Number of HSP's gapped (non-prelim): 295
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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