ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2j07 |
|---|---|
| Clone Library Name | barley_pub |
>ULP2_SCHPO (O13769) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)| Length = 652 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQ-RDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWK 256 L+ I++FY+ YL + + N + HIFNT+F+ +L + K K+ K +R+W + Sbjct: 377 LNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTS-KDKDGKRLGHRGVRKWTQ 435 Query: 257 GIDIFQMPYILFPVH 301 +D+F YI+ P++ Sbjct: 436 KVDLFHKKYIIVPIN 450
>SENP3_HUMAN (Q9H4L4) Sentrin-specific protease 3 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP3) (SUMO-1-specific protease 3) Length = 574 Score = 43.5 bits (101), Expect = 5e-04 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +2 Query: 95 MNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKGIDIFQ 274 +N +M + G + ++T +K H FN++F+ KL + + ++RW K +DIF Sbjct: 402 LNDQVMNMYGDLV-MDTVPEKVHFFNSFFYDKL--------RTKGYDGVKRWTKNVDIFN 452 Query: 275 MPYILFPVHAE*A-ILLSLSLRYITLDWY 358 +L P+H E L+S+ +R T+ ++ Sbjct: 453 KELLLIPIHLEVHWSLISVDVRRRTITYF 481
>SENP3_MOUSE (Q9EP97) Sentrin-specific protease 3 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP3) (SUMO-1-specific protease 3) (Smt3-specific isopeptidase 1) (Smt3ip1) Length = 568 Score = 43.5 bits (101), Expect = 5e-04 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +2 Query: 95 MNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKGIDIFQ 274 +N +M + G + ++T +K H FN++F+ KL + + ++RW K +DIF Sbjct: 396 LNDQVMNMYGDLV-MDTVPEKVHFFNSFFYDKL--------RTKGYDGVKRWTKNVDIFN 446 Query: 275 MPYILFPVHAE*A-ILLSLSLRYITLDWY 358 +L P+H E L+S+ +R T+ ++ Sbjct: 447 KELLLIPIHLEVHWSLISVDVRRRTITYF 475
>SENP1_HUMAN (Q9P0U3) Sentrin-specific protease 1 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP1) Length = 643 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKG 259 L+ I+NFY+ L S H FNT+FF KL K + + ++RW K Sbjct: 466 LNDEIINFYMNMLME--RSKEKGLPSVHAFNTFFFTKL--------KTAGYQAVKRWTKK 515 Query: 260 IDIFQMPYILFPVH 301 +D+F + +L P+H Sbjct: 516 VDVFSVDILLVPIH 529
>SENP1_MOUSE (P59110) Sentrin-specific protease 1 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP1) Length = 640 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKG 259 L+ I+NFY+ L S H FNT+FF KL K + + ++RW K Sbjct: 462 LNDEIINFYMNMLME--RSKEKGFPSVHAFNTFFFTKL--------KTAGYQAVKRWTKK 511 Query: 260 IDIFQMPYILFPVH 301 +D+F + +L P+H Sbjct: 512 VDVFSVDILLVPIH 525
>SENP2_HUMAN (Q9HC62) Sentrin-specific protease 2 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP2) (SMT3-specific isopeptidase 2) (Smt3ip2) (Axam2) Length = 589 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDK------YHIFNTYFFKKLEALKSKEDKCSYFLNL 241 L+ ++NFY+ L +R+K H+F+T+F+ KL K + + Sbjct: 411 LNDEVINFYMNLL--------VERNKKQGYPALHVFSTFFYPKL--------KSGGYQAV 454 Query: 242 RRWWKGIDIFQMPYILFPVH 301 +RW KG+++F+ IL P+H Sbjct: 455 KRWTKGVNLFEQEIILVPIH 474
>ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)| Length = 1034 Score = 39.7 bits (91), Expect = 0.007 Identities = 15/75 (20%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = +2 Query: 80 LSSPIMNFYI-MYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWK 256 ++ I++F+ Y++ + +R++ H+ +++F+ KL + + Y+ N+++W Sbjct: 458 VNDSILDFFTKFYIESSIEKSIIKREQVHLMSSFFYTKLIS-----NPADYYSNVKKWVN 512 Query: 257 GIDIFQMPYILFPVH 301 D+F Y++ P++ Sbjct: 513 NTDLFSKKYVVIPIN 527
>SENT_CAEEL (Q09353) Probable sentrin-specific protease (EC 3.4.22.-)| Length = 697 Score = 38.9 bits (89), Expect = 0.012 Identities = 20/74 (27%), Positives = 40/74 (54%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKG 259 L+ I+NFY+ + S+ +++ K + FNT+F+ + + + +++RW + Sbjct: 517 LNDEIINFYLQLICD-RSNGDSKYPKIYAFNTFFYSNIVS--------KGYASVKRWTRK 567 Query: 260 IDIFQMPYILFPVH 301 +DIF +L PVH Sbjct: 568 VDIFAFDIVLVPVH 581
>SENP2_MOUSE (Q91ZX6) Sentrin-specific protease 2 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP2) (SUMO-1/Smt3-specific isopeptidase 2) (Smt3ip2) (Axam2) Length = 588 Score = 38.5 bits (88), Expect = 0.015 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKY---HIFNTYFFKKLEALKSKEDKCSYFLNLRRW 250 L+ ++NFY+ L +++ Y H F+T+F+ KL K + ++RW Sbjct: 410 LNDEVINFYMNLLVE-----RSKKQGYPALHAFSTFFYPKL--------KSGGYQAVKRW 456 Query: 251 WKGIDIFQMPYILFPVH 301 KG+++F+ +L P+H Sbjct: 457 TKGVNLFEQELVLVPIH 473
>SENP5_MACFA (Q8WP32) Sentrin-specific protease 5 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP5) Length = 755 Score = 37.4 bits (85), Expect = 0.034 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +2 Query: 152 DKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKGIDIFQMPYILFPVHAE 307 DK H FN++F ++L + ++RW K +D+F+ +L P+H E Sbjct: 601 DKVHFFNSFFHRQLVT--------KGYNGVKRWTKKVDLFKKSLLLIPIHLE 644
>SENP5_HUMAN (Q96HI0) Sentrin-specific protease 5 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP5) Length = 755 Score = 37.4 bits (85), Expect = 0.034 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +2 Query: 152 DKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWKGIDIFQMPYILFPVHAE 307 DK H FN++F ++L + ++RW K +D+F+ +L P+H E Sbjct: 601 DKVHFFNSFFHRQLVT--------KGYNGVKRWTKKVDLFKKSLLLIPIHLE 644
>SENP6_HUMAN (Q9GZR1) Sentrin-specific protease 6 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP6) (SUMO-1-specific protease 1) Length = 1112 Score = 36.6 bits (83), Expect = 0.058 Identities = 19/82 (23%), Positives = 44/82 (53%), Gaps = 8/82 (9%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQ-RDKYHIFNTYFFKKLEALKSKEDKCSYFL------- 235 L+ I++FY+ YL + + + D+ HIF+++F+K+L + + + + Sbjct: 682 LNDVIIDFYLKYLV--LEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQKRHG 739 Query: 236 NLRRWWKGIDIFQMPYILFPVH 301 ++ W + +DIF+ +I P++ Sbjct: 740 RVKTWTRHVDIFEKDFIFVPLN 761
>ULP1_SCHPO (O42957) Ubiquitin-like-specific protease 1 (EC 3.4.22.-)| Length = 568 Score = 35.8 bits (81), Expect = 0.099 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSKEDKCSYFLNLRRWWK- 256 L+ ++NFY M L S I++ + H FNT+F+ L+ + +RRW K Sbjct: 393 LNDEVINFY-MNLISERSKIDSSLPRVHGFNTFFYTSLQR--------RGYAGVRRWAKK 443 Query: 257 -GIDIFQMPYILFPVHAE 307 ++I M + PVH + Sbjct: 444 ARVNIADMDAVFIPVHLD 461
>SENP7_HUMAN (Q9BQF6) Sentrin-specific protease 7 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP7) (SUMO-1-specific protease 2) Length = 984 Score = 35.8 bits (81), Expect = 0.099 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 8/87 (9%) Frame = +2 Query: 65 EPESLLSSPIMNFYIMYLQGPMSSINTQRDKYHIFNTYFFKKLEALKSK--EDKCSYFLN 238 E L+ I++FY+ YL +S + ++ HIF+++F+K L ++ ED + + Sbjct: 705 EEGEFLNDVIIDFYLKYLILEKAS-DELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMA 763 Query: 239 LRR------WWKGIDIFQMPYILFPVH 301 RR W + I+IF YI PV+ Sbjct: 764 QRRHKRVRTWTRHINIFNKDYIFVPVN 790
>SENP2_RAT (Q9EQE1) Sentrin-specific protease 2 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP2) (Axin-associating molecule) (Axam) Length = 588 Score = 35.4 bits (80), Expect = 0.13 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Frame = +2 Query: 80 LSSPIMNFYIMYLQGPMSSINTQRDKY---HIFNTYFFKKLEALKSKEDKCSYFLNLRRW 250 L+ ++NFY+ L +++ Y H +T+F+ KL K + ++RW Sbjct: 410 LNDEVINFYMNLLVE-----RSKKQGYPALHALSTFFYPKL--------KSGGYQAVKRW 456 Query: 251 WKGIDIFQMPYILFPVH 301 KG+++F +L P+H Sbjct: 457 TKGVNLFDQELVLVPIH 473
>AMSD_ERWAM (Q46634) Amylovoran biosynthesis glycosyl transferase amsD (EC| 2.-.-.-) Length = 351 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -1 Query: 348 KVMYLSERDNKIAYSACTGNNIYGI*NISMPFHH 247 KV+ L++ D SA + N+Y + NIS PFHH Sbjct: 135 KVVVLTQHDKNYLTSAFSLKNVYVVGNIS-PFHH 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,262,912 Number of Sequences: 219361 Number of extensions: 1443977 Number of successful extensions: 3096 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3085 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
