>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score =  365 bits (936), Expect = e-101
 Identities = 184/212 (86%), Positives = 189/212 (89%)
 Frame = +1

Query: 1    GGYRGSQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAESTSAHQGWRKVVDALCD 180
            GGYRGSQTLL SV+SEKQELCFSVVSLLW KLIASPE QMSAESTSAHQGWRKVVDALCD
Sbjct: 880  GGYRGSQTLLRSVLSEKQELCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCD 939

Query: 181  VVSASPAKASTAIVLQAEKDLQPWIARDDEEGQKMWRVNQRIVKLIAELMRNHDSPEXXX 360
            +VSASP KAS AIVLQAEKDLQPWIARDDE+GQKMWRVNQRIVKLIAELMRNHDSPE   
Sbjct: 940  IVSASPTKASAAIVLQAEKDLQPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALV 999

Query: 361  XXXXXXXXXXXXTDGMLVDGEACTLPQLELLEVTARAIHLIVEWGDPGVAVADGLSNLLK 540
                        TDGMLVDGEACTLPQLELLEVTARA+HLIVEWGD GV+VADGLSNLLK
Sbjct: 1000 ILASASDLLLRATDGMLVDGEACTLPQLELLEVTARAVHLIVEWGDSGVSVADGLSNLLK 1059

Query: 541  CRLSPTIRCLSHASAHVRALSMSVLRDILNSG 636
            CRLS TIRCLSH SAHVRALSMSVLRDILNSG
Sbjct: 1060 CRLSTTIRCLSHPSAHVRALSMSVLRDILNSG 1091

>GIGAN_ARATH (Q9SQI2) GIGANTEA protein|
          Length = 1173

 Score =  305 bits (780), Expect = 1e-82
 Identities = 151/210 (71%), Positives = 172/210 (81%)
 Frame = +1

Query: 1    GGYRGSQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAESTSAHQGWRKVVDALCD 180
            G Y G+Q LL SV++EK EL FSVVSLLWHKLIA+PE Q +AESTSA QGWR+VVDALC+
Sbjct: 889  GFYCGTQKLLRSVLAEKPELSFSVVSLLWHKLIAAPEIQPTAESTSAQQGWRQVVDALCN 948

Query: 181  VVSASPAKASTAIVLQAEKDLQPWIARDDEEGQKMWRVNQRIVKLIAELMRNHDSPEXXX 360
            VVSA+PAKA+ A+VLQAE++LQPWIA+DDEEGQKMW++NQRIVK++ ELMRNHD PE   
Sbjct: 949  VVSATPAKAAAAVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVLVELMRNHDRPESLV 1008

Query: 361  XXXXXXXXXXXXTDGMLVDGEACTLPQLELLEVTARAIHLIVEWGDPGVAVADGLSNLLK 540
                        TDGMLVDGEACTLPQLELLE TARAI  ++ WG  G+AV DGLSNLLK
Sbjct: 1009 ILASASDLLLRATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLK 1068

Query: 541  CRLSPTIRCLSHASAHVRALSMSVLRDILN 630
            CRL  TIRCLSH SAHVRALS SVLRDI+N
Sbjct: 1069 CRLPATIRCLSHPSAHVRALSTSVLRDIMN 1098

>JAG1A_BRARE (Q90Y57) Jagged-1a precursor (Jagged1a) (Jagged1)|
          Length = 1242

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/59 (37%), Positives = 25/59 (42%)
 Frame = +3

Query: 123 CRKYISSSRLEKGCRCPL*CCFSLTSQGFNCYCSAG*EGPTALDCSR*RGRSKDVESQP 299
           C    +SS L   C     C   +T  GF C C  G EGPT   CS+    S D   QP
Sbjct: 743 CNIAKNSSCLPNPCENGATCV--VTGDGFTCVCKEGWEGPT---CSQ---NSNDCNPQP 793

>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)|
           (GAS2-related protein on chromosome 22) (GAR22 protein)
          Length = 681

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
 Frame = -1

Query: 533 RFERPSATATPGSPHSTMR*IALAVTSRSS-N*GKVQASP-----STSIPSVARSRRSEA 372
           R ERPS   T G+P S  R  AL   SR   + G+ + +P       S+PS AR  RS++
Sbjct: 379 RRERPSRRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRARSQS 438

>KRAF1_CAEEL (Q07292) Raf homolog serine/threonine-protein kinase (EC 2.7.11.1)|
           (Abnormal cell lineage protein 45)
          Length = 813

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 530 FERPSATATPGSPH-STMR*IALAVTSRSSN*GKVQASPSTSIPSVARSRRSEAL 369
           F++ SA+ TP SPH  + R I+L   + SS   K QASP  S  +    + S++L
Sbjct: 6   FKKSSASTTPTSPHCPSPRLISLPRCASSSIDRKDQASPMASPSTPLYPKHSDSL 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.131    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,679,086
Number of Sequences: 219361
Number of extensions: 1456527
Number of successful extensions: 4317
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4317
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)