ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah59a20 |
|---|---|
| Clone Library Name | barley_pub |
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 231 bits (590), Expect = 9e-61 Identities = 105/190 (55%), Positives = 146/190 (76%), Gaps = 2/190 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 +P +S + EAI VISC YE+KTEWG+ +GWIYGSVTED++TG+RMH RGWKSVYC+ Sbjct: 707 LPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCM 766 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RRMKCLQRIAYLNVGI 373 KR AF+G+APINL+DRLHQVLRWA GSVEIFFSR+ L + ++K L+R+AY+N + Sbjct: 767 PKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIV 826 Query: 374 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 553 YPFTSI L+ YC +PA+ L +G+FI+ ++ + L + L++ A+LE++WSG+++ Sbjct: 827 YPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSIN 886 Query: 554 EWWRNEQFWL 583 + WRNEQFW+ Sbjct: 887 DLWRNEQFWV 896
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 230 bits (586), Expect = 3e-60 Identities = 103/191 (53%), Positives = 142/191 (74%), Gaps = 3/191 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 VP A + EAI VISC YEDKTEWG +GWIYGS+TED++TG++MH RGW+S+YC+ Sbjct: 685 VPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSIYCM 744 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL---LASRRMKCLQRIAYLNVG 370 KR AF+G+APINL+DRL+QVLRWA GSVEIFFSR++ L ++K L+R AY N Sbjct: 745 PKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTT 804 Query: 371 IYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINL 550 IYPFTSI L+ YC LPA+ L + +FI+ + + + + +++ + +LE++WSG+++ Sbjct: 805 IYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSI 864 Query: 551 EEWWRNEQFWL 583 EEWWRNEQFW+ Sbjct: 865 EEWWRNEQFWV 875
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 228 bits (581), Expect = 1e-59 Identities = 102/191 (53%), Positives = 145/191 (75%), Gaps = 3/191 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 VP + ++ + EAI VISC YE+KTEWG+ +GWIYGS+TED++TG++MH RGW+S+YC+ Sbjct: 642 VPDSVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCM 701 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL---LASRRMKCLQRIAYLNVG 370 R AF+G+APINL+DRLHQVLRWA GSVEIF SR+ L + R+K LQR+AY+N Sbjct: 702 PLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTI 761 Query: 371 IYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINL 550 +YPFTS+ L+ YC LPA+ L +G+FI+ L L + +++ + +VLE++WSG+++ Sbjct: 762 VYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSI 821 Query: 551 EEWWRNEQFWL 583 E+ WRNEQFW+ Sbjct: 822 EDLWRNEQFWV 832
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 226 bits (576), Expect = 4e-59 Identities = 102/190 (53%), Positives = 143/190 (75%), Gaps = 2/190 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 VPR+ A + EAI VISC YEDKTEWG+ +GWIYGSVTED++TG++MH GW+SVYC+ Sbjct: 743 VPRNASPACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCM 802 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGI 373 KR AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R +Y+N + Sbjct: 803 PKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVV 862 Query: 374 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 553 YP+TS+ LIVYC LPA+ L +G+FIV E+ +++ +++ + +LE++W G+ ++ Sbjct: 863 YPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGID 922 Query: 554 EWWRNEQFWL 583 +WWRNEQFW+ Sbjct: 923 DWWRNEQFWV 932
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 224 bits (571), Expect = 1e-58 Identities = 101/190 (53%), Positives = 141/190 (74%), Gaps = 2/190 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 VP + + EAI VISC YEDK++WG +GWIYGSVTED++TG++MH RGW+S+YC+ Sbjct: 724 VPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCM 783 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGI 373 K AF+G+APINL+DRL+QVLRWA GSVEI FSR+ + + R+K L+R AY+N I Sbjct: 784 PKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTI 843 Query: 374 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 553 YP TSI L++YC LPA+ LF+ QFI+ ++ + L + L++ +LE++WSG+ ++ Sbjct: 844 YPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGID 903 Query: 554 EWWRNEQFWL 583 EWWRNEQFW+ Sbjct: 904 EWWRNEQFWV 913
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 221 bits (563), Expect = 1e-57 Identities = 100/190 (52%), Positives = 143/190 (75%), Gaps = 2/190 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 VP ++ AS + E+I VISC YE+KTEWG+ +GWIYGSVTED++TG++MH GW+SVYC+ Sbjct: 747 VPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCM 806 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGI 373 KR AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R +Y+N + Sbjct: 807 PKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVV 866 Query: 374 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 553 YP+TS+ L+VYC LPA+ L +G+FIV E+ L++ +++ + +LE++W I ++ Sbjct: 867 YPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGID 926 Query: 554 EWWRNEQFWL 583 +WWRNEQFW+ Sbjct: 927 DWWRNEQFWV 936
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 221 bits (562), Expect = 2e-57 Identities = 98/190 (51%), Positives = 140/190 (73%), Gaps = 2/190 (1%) Frame = +2 Query: 20 VPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCV 199 +P A+ + EAI VISC YEDKTEWG+ +GWIYGSVTED++TG++MH RGW S+YC Sbjct: 739 IPPTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCN 798 Query: 200 TKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RRMKCLQRIAYLNVGI 373 R AF+G+APINL+DRL+QVLRWA GS+EI SR+ + R++ L+RIAY+N + Sbjct: 799 PPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIV 858 Query: 374 YPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLE 553 YP TSI LI YC LPA L + +FI+ E+ + +++ +++ + +LE++WSG+++E Sbjct: 859 YPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIE 918 Query: 554 EWWRNEQFWL 583 +WWRNEQFW+ Sbjct: 919 DWWRNEQFWV 928
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 219 bits (557), Expect = 6e-57 Identities = 99/188 (52%), Positives = 139/188 (73%), Gaps = 2/188 (1%) Frame = +2 Query: 26 RDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTK 205 R+ AS + EAI VISC YEDKTEWG+ +GWIYGSVTED++TG++MH+ GW+SVYC K Sbjct: 731 RNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPK 790 Query: 206 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGIYP 379 AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R++Y+N +YP Sbjct: 791 IPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYP 850 Query: 380 FTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLEEW 559 +TSI L+VYC LPA+ L +G+FIV E+ + + ++ + +LE++W + +++W Sbjct: 851 WTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDW 910 Query: 560 WRNEQFWL 583 WRNEQFW+ Sbjct: 911 WRNEQFWV 918
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 218 bits (554), Expect = 1e-56 Identities = 98/188 (52%), Positives = 138/188 (73%), Gaps = 2/188 (1%) Frame = +2 Query: 26 RDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTK 205 R+ A + EAI VISC YEDKTEWG+ +GWIYGSVTED++TG++MH+ GW+SVYC K Sbjct: 746 RNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPK 805 Query: 206 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGIYP 379 AF+G+APINL+DRLHQVLRWA GSVEIF SR+ + +K L+R++Y+N +YP Sbjct: 806 LAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYP 865 Query: 380 FTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLEEW 559 +TS+ LIVYC LPA+ L +G+FIV E+ + + ++ + +LE++W + +++W Sbjct: 866 WTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDW 925 Query: 560 WRNEQFWL 583 WRNEQFW+ Sbjct: 926 WRNEQFWV 933
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 213 bits (542), Expect = 3e-55 Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 2/178 (1%) Frame = +2 Query: 56 EAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPI 235 EAI VISC YE KT+WG+ +GWIYGSVTED++TG++MH RGW S+YCV R AF+G+API Sbjct: 738 EAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPI 797 Query: 236 NLTDRLHQVLRWATGSVEIFFSRNNALL--ASRRMKCLQRIAYLNVGIYPFTSIFLIVYC 409 NL+DRL+QVLRWA GS+EI SR+ + + R+K L+RIAY+N +YP TSI L+ YC Sbjct: 798 NLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYC 857 Query: 410 FLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAVLEIKWSGINLEEWWRNEQFWL 583 LPA L + FI+ E+ +++ ++ A+LE+KWS + LE+WWRNEQFW+ Sbjct: 858 MLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWV 915
>BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 756 Score = 62.0 bits (149), Expect = 1e-09 Identities = 41/124 (33%), Positives = 59/124 (47%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T RM RGW + Y + G A LT + Q +RWA G ++IF Sbjct: 326 GFAVETVTEDAHTALRMQRRGWSTAY--LRIPVASGLATERLTTHIGQRMRWARGMIQIF 383 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFL 475 N L R +K QR+ YL+ F +I +++ P LF+GQ I+ + Sbjct: 384 RVDNPML--GRGLKLGQRLCYLSAMTSFFFAIPRVIFLASPLAFLFAGQNIIAAAPLAVA 441 Query: 476 TYLL 487 Y L Sbjct: 442 AYAL 445
>BCSA_XANAC (P58932) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 729 Score = 60.8 bits (146), Expect = 3e-09 Identities = 41/138 (29%), Positives = 67/138 (48%) Frame = +2 Query: 74 SCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRL 253 SC +T + G +VTED T ++ RG+++ Y + A G A +L+ + Sbjct: 314 SCAVIKRTALEEVGGVAVETVTEDAHTALKLQRRGYRTAYLAVPQAA--GLATESLSGHV 371 Query: 254 HQVLRWATGSVEIFFSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLF 433 Q +RWA G +I +R + L R +K QR+ YLN ++ F + I+Y P LF Sbjct: 372 AQRIRWARGMAQI--ARIDNPLLGRGLKLSQRLCYLNAMLHFFYGVPRIIYLTAPLAYLF 429 Query: 434 SGQFIVKELDVTFLTYLL 487 G +++ + L Y L Sbjct: 430 FGAHVIQASALMILAYAL 447
>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 754 Score = 58.9 bits (141), Expect = 1e-08 Identities = 40/124 (32%), Positives = 58/124 (46%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T RM RGW + Y + G A LT + Q +RWA G ++IF Sbjct: 324 GFAVETVTEDAHTALRMQRRGWSTAY--LRIPVASGLATERLTTHIGQRMRWARGMIQIF 381 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFL 475 N L +K QR+ YL+ F +I +++ P LF GQ I+ + L Sbjct: 382 RVDNPML--GGGLKLGQRLCYLSAMTSFFFAIPRVIFLASPLAFLFFGQNIIAASPLAVL 439 Query: 476 TYLL 487 Y + Sbjct: 440 AYAI 443
>BCSA_SALTI (Q8Z291) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 874 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/107 (32%), Positives = 55/107 (51%) Frame = +2 Query: 131 SVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN 310 +VTED T R+H RG+ S Y + A G A +L+ + Q +RWA G V+IF R + Sbjct: 453 TVTEDAHTSLRLHRRGYTSAYMRIPQSA--GLATESLSAHIGQRIRWARGMVQIF--RLD 508 Query: 311 ALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 451 L + +K QR+ YLN + + I +++ P L +I+ Sbjct: 509 NPLFGKGLKLAQRLCYLNAMFHFLSGIPRLIFLTAPLAFLLLHAYII 555
>BCSA_SALTY (Q93IN2) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 874 Score = 53.9 bits (128), Expect = 3e-07 Identities = 35/107 (32%), Positives = 55/107 (51%) Frame = +2 Query: 131 SVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN 310 +VTED T R+H RG+ S Y + A G A +L+ + Q +RWA G V+IF R + Sbjct: 453 TVTEDAHTSLRLHRRGYTSAYMRIPQAA--GLATESLSAHIGQRIRWARGMVQIF--RLD 508 Query: 311 ALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 451 L + +K QR+ YLN + + I +++ P L +I+ Sbjct: 509 NPLFGKGLKLAQRLCYLNAMFHFLSGIPRLIFLTAPLAFLLLHAYII 555
>BCSA_ECOLI (P37653) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 872 Score = 53.1 bits (126), Expect = 6e-07 Identities = 34/107 (31%), Positives = 55/107 (51%) Frame = +2 Query: 131 SVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN 310 +VTED T R+H RG+ S Y + A G A +L+ + Q +RWA G V+IF R + Sbjct: 453 TVTEDAHTSLRLHRRGYTSAYMRIPQAA--GLATESLSAHIGQRIRWARGMVQIF--RLD 508 Query: 311 ALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 451 L + +K QR+ Y+N + + I +++ P L +I+ Sbjct: 509 NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYII 555
>BCSA_ECO57 (Q8X5L7) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 872 Score = 53.1 bits (126), Expect = 6e-07 Identities = 34/107 (31%), Positives = 55/107 (51%) Frame = +2 Query: 131 SVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN 310 +VTED T R+H RG+ S Y + A G A +L+ + Q +RWA G V+IF R + Sbjct: 453 TVTEDAHTSLRLHRRGYTSAYMRIPQAA--GLATESLSAHIGQRIRWARGMVQIF--RLD 508 Query: 311 ALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 451 L + +K QR+ Y+N + + I +++ P L +I+ Sbjct: 509 NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYII 555
>BCSA3_ACEXY (Q9WX61) Cellulose synthase 1 catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 745 Score = 50.8 bits (120), Expect = 3e-06 Identities = 36/112 (32%), Positives = 55/112 (49%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T RM +GW + Y + G A L + Q +RWA G ++I Sbjct: 324 GFATETVTEDAHTALRMQRKGWSTAY--LRIPLASGLATERLITHIGQRMRWARGMIQI- 380 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIV 451 F +N +L S +K QR+ YL+ F +I +++ P LF Q I+ Sbjct: 381 FRVDNPMLGS-GLKLGQRLCYLSAMTSFFFAIPRVIFLASPLAFLFFSQNII 431
>BCSA5_ACEXY (Q9WX75) Putative cellulose synthase 3 [Includes: Cellulose| synthase catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 3 regulatory subunit)] Length = 1518 Score = 50.8 bits (120), Expect = 3e-06 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 1/141 (0%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T +M RGW + Y + G A L + Q +RWA G ++I Sbjct: 321 GFATETVTEDAHTALKMQRRGWGTAY--LREPLAAGLATERLILHIGQRVRWARGMIQIM 378 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFL 475 N L A R + QR+ YL+ + +I + + P LF GQ I+ + Sbjct: 379 RLDNPMLGAGLRWE--QRLCYLSAMSHFLFAIPRLTFLVSPLAFLFLGQNIIAASPLAIS 436 Query: 476 TYLLV-ITLTLCMLAVLEIKW 535 Y L I ++ L+ +E +W Sbjct: 437 VYALPHIFHSVITLSRIEGRW 457
>BCSA4_ACEXY (Q9RBJ2) Putative cellulose synthase 2 [Includes: Cellulose| synthase catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 2 regulatory subunit)] Length = 1518 Score = 50.8 bits (120), Expect = 3e-06 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 1/141 (0%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T +M RGW + Y + G A L + Q +RWA G ++I Sbjct: 321 GFATETVTEDAHTALKMQRRGWGTAY--LREPLAAGLATERLILHIGQRVRWARGMIQIM 378 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFL 475 N L A R + QR+ YL+ + +I + + P LF GQ I+ + Sbjct: 379 RLDNPMLGAGLRWE--QRLCYLSAMSHFLFAIPRLTFLVSPLAFLFLGQNIIAASPLAIS 436 Query: 476 TYLLV-ITLTLCMLAVLEIKW 535 Y L I ++ L+ +E +W Sbjct: 437 VYALPHIFHSVITLSRIEGRW 457
>ACSA1_ACEXY (P21877) Cellulose synthase 1 [Includes: Cellulose synthase| catalytic domain [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 1 regulatory domain)] Length = 1550 Score = 48.9 bits (115), Expect = 1e-05 Identities = 39/138 (28%), Positives = 61/138 (44%) Frame = +2 Query: 74 SCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRL 253 SC +T Q G+ +VTED T +M GW + Y + G A L + Sbjct: 310 SCAILRRTAIEQIGGFATQTVTEDAHTALKMQRLGWSTAY--LRIPLAGGLATERLILHI 367 Query: 254 HQVLRWATGSVEIFFSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLF 433 Q +RWA G ++IF R + L R + QR+ YL+ ++ +++ P LF Sbjct: 368 GQRVRWARGMLQIF--RIDNPLFGRGLSWGQRLCYLSAMTSFLFAVPRVIFLSSPLAFLF 425 Query: 434 SGQFIVKELDVTFLTYLL 487 GQ I+ + L Y + Sbjct: 426 FGQNIIAASPLALLAYAI 443
>BCSA_PSEFL (P58931) Cellulose synthase catalytic subunit [UDP-forming] (EC| 2.4.1.12) Length = 739 Score = 47.8 bits (112), Expect = 2e-05 Identities = 34/119 (28%), Positives = 57/119 (47%) Frame = +2 Query: 131 SVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNN 310 +VTED T +++ G+ + Y + A G A +L+ ++Q +RWA G +IF R + Sbjct: 339 TVTEDAHTALKLNRLGYNTAYLAIPQAA--GLATESLSRHINQRIRWARGMAQIF--RTD 394 Query: 311 ALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLL 487 L + +K QRI Y N + F + +V+ P L G I + + Y+L Sbjct: 395 NPLLGKGLKWGQRICYANAMQHFFYGLPRLVFLTAPLAYLIFGAEIFHASALMIVAYVL 453
>ACSA2_ACEXY (Q59167) Cellulose synthase 2 [Includes: Cellulose synthase| catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic di-GMP-binding domain (Cellulose synthase 2 regulatory domain)] Length = 1596 Score = 47.8 bits (112), Expect = 2e-05 Identities = 36/122 (29%), Positives = 57/122 (46%) Frame = +2 Query: 116 GWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIF 295 G+ +VTED T +M GW + Y ++ G + L + Q +RWA G ++I Sbjct: 322 GFATETVTEDAHTALKMQREGWHTAY--LRQPLAAGLSTERLMLHIGQRVRWARGMLQI- 378 Query: 296 FSRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFL 475 +N LL S ++ QR+ YL+ + +I +V+ P LF GQ I+ L Sbjct: 379 MRLDNPLLGS-GLRWQQRLCYLSAMSHFLFAIPRLVFLASPLAFLFLGQNIIAASPFAIL 437 Query: 476 TY 481 Y Sbjct: 438 VY 439
>ICAA_STAAW (Q8NUI7) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAU (Q9RQP9) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAS (Q6G608) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAR (Q6GDD8) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAN (Q7A351) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAM (Q99QX3) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>ICAA_STAAC (Q5HCN1) Biofilm PIA synthesis N-glycosyltransferase icaA (EC| 2.4.-.-) (Intercellular adhesion protein A) Length = 412 Score = 35.0 bits (79), Expect = 0.16 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++H RG++ Y P L Q +RWA G E+ Sbjct: 219 WDTDMITEDIAVSWKLHLRGYRIKY--EPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLL 276 Query: 299 SRNNALLASRRMKCLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLT 478 + + ++R + I F I I++ ++ L L LD TF+T Sbjct: 277 RDFFSTMKTKRFP---------LYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMT 327 Query: 479 Y----LLVITLTLCMLAVLE 526 Y L+ + T+ + V++ Sbjct: 328 YSFSIFLLSSFTMTFINVIQ 347
>CHRD_BRARE (O57472) Chordin precursor (Protein chordino)| Length = 940 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = -3 Query: 172 VVHPVPCDDILCD*TINPSDTLTPLCLVLIPA*DDTNSLSDRGGVEKVTRDSEG 11 + PV C + C T+ P D P+C ++ + VEKV + EG Sbjct: 722 ICDPVMCPTLSCTHTVQPEDQCCPIC-------EEKKESKETAAVEKVEENPEG 768
>LNT_RICCN (Q92IC5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 499 Score = 30.8 bits (68), Expect = 3.0 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 13/85 (15%) Frame = +2 Query: 365 VGIYPFTSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCMLAV-------- 520 +GIY + F+++Y A LFS QF +L + + +LV+T+ + AV Sbjct: 156 IGIYGLS--FIVIYISTSAYPLFSKQF--TQLKILLASSVLVLTIIVIYGAVRLSNNHTN 211 Query: 521 -----LEIKWSGINLEEWWRNEQFW 580 + + I E W E+FW Sbjct: 212 FTDIKVRLVQPSIPQTEKWNEEEFW 236
>ATKB_STRCO (Q9X8Z9) Potassium-transporting ATPase B chain (EC 3.6.3.12)| (Potassium-translocating ATPase B chain) (ATP phosphohydrolase [potassium-transporting] B chain) (Potassium-binding and translocating subunit B) Length = 707 Score = 30.4 bits (67), Expect = 3.9 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%) Frame = +2 Query: 206 RDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN-NALLASRRMKCLQRIAYLNVGIYPF 382 R A G + L+DR+ V+R T E F R N + + R K IA LN+ + Sbjct: 192 RSAVTGGTKV-LSDRI--VVRITTKPGETFIDRMINLVEGAARQKTPNEIA-LNILLASL 247 Query: 383 TSIFLIVYCFLPALSLFSGQFIVKELDVTFLTYLLVITLTLCML 514 T +FL+ LP + ++G T L ++++ L +C++ Sbjct: 248 TVVFLLACATLPPFADYAG---------THLDMIVLVALLVCLI 282
>NR1D1_HUMAN (P20393) Orphan nuclear receptor NR1D1 (V-erbA-related protein| EAR-1) (Rev-erbA-alpha) Length = 614 Score = 30.4 bits (67), Expect = 3.9 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 220 RHCTYQPD*PSPPGAPVGYWLSGDLLLPQQCA-AREPKDEVSSEDCVPE 363 +H T P PSPP APV L G PQQ R P E + ED + + Sbjct: 243 QHPTPGPMGPSPPPAPVPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQ 291
>KCY_BACHD (Q9RC80) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 222 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/66 (33%), Positives = 30/66 (45%) Frame = +3 Query: 63 LVSSHAGMRTRQSGVSVSDGFMVQSQRMSSQGTGCTTVGGSLSTVSPSVMPSAALHLST* 242 LVSSH +R MV+ QR+ ++GT C G + T V+P+A L Sbjct: 100 LVSSHGQVRKE----------MVRQQRLLAEGTNCVLDGRDIGTY---VLPNAELKFFLT 146 Query: 243 LTVSTR 260 TV R Sbjct: 147 ATVEER 152
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 29.6 bits (65), Expect = 6.7 Identities = 29/88 (32%), Positives = 42/88 (47%) Frame = +3 Query: 3 LLVPSLSLVTFSTPPRSLRLLVSSHAGMRTRQSGVSVSDGFMVQSQRMSSQGTGCTTVGG 182 L PS++ V+F++ P+S LL S T S +S S V S SS + T+ Sbjct: 73 LSTPSIASVSFTSFPQSSSLLTLS----STLSSELS-SSSMQVSSSSTSSSSSEVTS-SS 126 Query: 183 SLSTVSPSVMPSAALHLST*LTVSTRCS 266 S S++SPS S + S+ L T S Sbjct: 127 SSSSISPSSSSSTIISSSSSLPTFTVAS 154
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 6.7 Identities = 28/100 (28%), Positives = 42/100 (42%) Frame = +3 Query: 21 SLVTFSTPPRSLRLLVSSHAGMRTRQSGVSVSDGFMVQSQRMSSQGTGCTTVGGSLSTVS 200 S VT + P +L +S + S V+ S + ++S + TTV ST S Sbjct: 421 STVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTES 480 Query: 201 PSVMPSAALHLST*LTVSTRCSGGLLAQWRSSSPATMRCS 320 S PS+ + ST ST +G + SS A+ S Sbjct: 481 TSTSPSSTVTTST-TAPSTSTTGPSSSSSTPSSTASSSVS 519
>PGAC_ECOLI (P75905) Biofilm PGA synthesis N-glycosyltransferase pgaC (EC| 2.4.-.-) Length = 441 Score = 29.3 bits (64), Expect = 8.7 Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 3/139 (2%) Frame = +2 Query: 119 WIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFF 298 W +TED+ +++ W Y R P L Q LRWA G E+F Sbjct: 248 WSDDMITEDIDISWKLQLNQWTIFY--EPRALCWILMPETLKGLWKQRLRWAQGGAEVFL 305 Query: 299 SRNNALLASRRMKCLQR-IAYLNVGIYPFTSI--FLIVYCFLPALSLFSGQFIVKELDVT 469 L + Y I+ FT + F+I L + L +++T Sbjct: 306 KNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGFIIYAVQLAGVPL--------NIELT 357 Query: 470 FLTYLLVITLTLCMLAVLE 526 + + LC L +L+ Sbjct: 358 HIAATHTAGILLCTLCLLQ 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,910,930 Number of Sequences: 219361 Number of extensions: 1736155 Number of successful extensions: 5537 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5504 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
