Clone Name | bah59o05 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_474099.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5163 Score = 615 bits (310), Expect = e-173 Identities = 550/630 (87%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 518 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 577 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccactttatcaggaggaaggaga 124 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 578 acgacttcctctccttcgcccacctcaccccgcccgtccactttatcaggaggaaggaga 637 Query: 125 ggaatggggctgcccaggacggcgattacttcgaaatcgaggtgaaggtttgcaacggga 184 | ||||| ||| | ||||| ||||| |||||||||||||||||||| |||||||| |||| Sbjct: 638 gcaatggcgcttctcaggaaggcgactacttcgaaatcgaggtgaaagtttgcaatggga 697 Query: 185 agcttctgcacatagttgcttcggccaagggattctacctggtgggcaagccgcacaccg 244 |||| |||||||| |||||||| | |||||| ||||| || || ||||||||||||| Sbjct: 698 agctcctgcacatcgttgcttccgtcaagggcttctattcggcagggaagccgcacaccg 757 Query: 245 taagccggtccttggtggacctgctacagcagctcagcagtggatttgccaatgcgtacg 304 | |||| ||||||||||| ||| | || ||||||||||||| |||||||||||| || | Sbjct: 758 tgagccactccttggtggatctgttgcaacagctcagcagtgcatttgccaatgcatatg 817 Query: 305 aggcactgatgaaagcttttgtggatcacaacaagtttgggaatctgccattcggctttc 364 | |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| Sbjct: 818 atgcactgatgaaagcttttctggatcacaacaagtttgggaatctaccatacggatttc 877 Query: 365 gtgcaaacacatggcttgttcctcctgtatatgtggattctgctacgaagagcccagctt 424 ||||||||||||||||| |||||||| |||| ||||||||||||| ||| ||||||| | Sbjct: 878 gtgcaaacacatggcttattcctcctatatacttggattctgctacaaagtgcccagcat 937 Query: 425 tgcccgctgaggatgagaactggggtgggaatggaggtggctgcggacgagacggaaaac 484 | || | |||||||||||| |||||||| || || |||||| || ||||| ||||| Sbjct: 938 taccagttgaggatgagaattggggtggaaacgggggtggcaatgggcgagatggaaagt 997 Query: 485 atgaccggagacgctgggcaagagaattttctattttggctagaatgccgtccaagactg 544 ||||| | ||||| ||||||| ||||||||||| ||||||||||||||| | ||| |||| Sbjct: 998 atgacagaagacgatgggcaaaagaattttctactttggctagaatgccatgcaaaactg 1057 Query: 545 aggaagagagggtgatcagagaccggaaggctttccttttacacaacctgtttgtagata 604 |||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 1058 aggaagggagggtgatcagagaccggaaggcttttcttttacacaatctctttgtagata 1117 Query: 605 cagcgattttcagagctgcgtcgacaatac 634 |||| ||||| |||||||| || ||||||| Sbjct: 1118 cagcaatttttagagctgcatcaacaatac 1147
>dbj|AK072140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122D02, full insert sequence Length = 3637 Score = 615 bits (310), Expect = e-173 Identities = 550/630 (87%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 553 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 612 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccactttatcaggaggaaggaga 124 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 613 acgacttcctctccttcgcccacctcaccccgcccgtccactttatcaggaggaaggaga 672 Query: 125 ggaatggggctgcccaggacggcgattacttcgaaatcgaggtgaaggtttgcaacggga 184 | ||||| ||| | ||||| ||||| |||||||||||||||||||| |||||||| |||| Sbjct: 673 gcaatggcgcttctcaggaaggcgactacttcgaaatcgaggtgaaagtttgcaatggga 732 Query: 185 agcttctgcacatagttgcttcggccaagggattctacctggtgggcaagccgcacaccg 244 |||| |||||||| |||||||| | |||||| ||||| || || ||||||||||||| Sbjct: 733 agctcctgcacatcgttgcttccgtcaagggcttctattcggcagggaagccgcacaccg 792 Query: 245 taagccggtccttggtggacctgctacagcagctcagcagtggatttgccaatgcgtacg 304 | |||| ||||||||||| ||| | || ||||||||||||| |||||||||||| || | Sbjct: 793 tgagccactccttggtggatctgttgcaacagctcagcagtgcatttgccaatgcatatg 852 Query: 305 aggcactgatgaaagcttttgtggatcacaacaagtttgggaatctgccattcggctttc 364 | |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||| Sbjct: 853 atgcactgatgaaagcttttctggatcacaacaagtttgggaatctaccatacggatttc 912 Query: 365 gtgcaaacacatggcttgttcctcctgtatatgtggattctgctacgaagagcccagctt 424 ||||||||||||||||| |||||||| |||| ||||||||||||| ||| ||||||| | Sbjct: 913 gtgcaaacacatggcttattcctcctatatacttggattctgctacaaagtgcccagcat 972 Query: 425 tgcccgctgaggatgagaactggggtgggaatggaggtggctgcggacgagacggaaaac 484 | || | |||||||||||| |||||||| || || |||||| || ||||| ||||| Sbjct: 973 taccagttgaggatgagaattggggtggaaacgggggtggcaatgggcgagatggaaagt 1032 Query: 485 atgaccggagacgctgggcaagagaattttctattttggctagaatgccgtccaagactg 544 ||||| | ||||| ||||||| ||||||||||| ||||||||||||||| | ||| |||| Sbjct: 1033 atgacagaagacgatgggcaaaagaattttctactttggctagaatgccatgcaaaactg 1092 Query: 545 aggaagagagggtgatcagagaccggaaggctttccttttacacaacctgtttgtagata 604 |||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 1093 aggaagggagggtgatcagagaccggaaggcttttcttttacacaatctctttgtagata 1152 Query: 605 cagcgattttcagagctgcgtcgacaatac 634 |||| ||||| |||||||| || ||||||| Sbjct: 1153 cagcaatttttagagctgcatcaacaatac 1182
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 272 bits (137), Expect = 1e-69 Identities = 257/297 (86%) Strand = Plus / Plus Query: 338 agtttgggaatctgccattcggctttcgtgcaaacacatggcttgttcctcctgtatatg 397 ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| |||| Sbjct: 17407 agtttgggaatctaccatacggatttcgtgcaaacacatggcttattcctcctatatact 17466 Query: 398 tggattctgctacgaagagcccagctttgcccgctgaggatgagaactggggtgggaatg 457 ||||||||||||| ||| ||||||| || || | |||||||||||| |||||||| || | Sbjct: 17467 tggattctgctacaaagtgcccagcattaccagttgaggatgagaattggggtggaaacg 17526 Query: 458 gaggtggctgcggacgagacggaaaacatgaccggagacgctgggcaagagaattttcta 517 | |||||| || ||||| ||||| ||||| | ||||| ||||||| ||||||||||| Sbjct: 17527 ggggtggcaatgggcgagatggaaagtatgacagaagacgatgggcaaaagaattttcta 17586 Query: 518 ttttggctagaatgccgtccaagactgaggaagagagggtgatcagagaccggaaggctt 577 ||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||||| Sbjct: 17587 ctttggctagaatgccatgcaaaactgaggaagggagggtgatcagagaccggaaggctt 17646 Query: 578 tccttttacacaacctgtttgtagatacagcgattttcagagctgcgtcgacaatac 634 | ||||||||||| || |||||||||||||| ||||| |||||||| || ||||||| Sbjct: 17647 ttcttttacacaatctctttgtagatacagcaatttttagagctgcatcaacaatac 17703 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 16639 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 16698 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccact 106 |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 16699 acgacttcctctccttcgcccacctcaccccgcccgtccact 16740 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 164 aggtgaaggtttgcaacgggaagcttctgcacatagttgcttcggccaagggattctacc 223 ||||||| |||||||| |||||||| |||||||| |||||||| | |||||| ||||| Sbjct: 16995 aggtgaaagtttgcaatgggaagctcctgcacatcgttgcttccgtcaagggcttctatt 17054 Query: 224 tggtgggcaagccgcacaccgtaagccggtccttggtggacctgctacagcagctcagca 283 || || |||||||||||||| |||| ||||||||||| ||| | || |||||||||| Sbjct: 17055 cggcagggaagccgcacaccgtgagccactccttggtggatctgttgcaacagctcagca 17114 Query: 284 gtggatttgccaatg 298 ||| ||||||||||| Sbjct: 17115 gtgcatttgccaatg 17129 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 107 ttatcaggaggaaggagaggaatggggctgcccaggacggcgattacttcgaaatcgagg 166 ||||||||||||||||||| ||||| ||| | ||||| ||||| |||||||||||||||| Sbjct: 16826 ttatcaggaggaaggagagcaatggcgcttctcaggaaggcgactacttcgaaatcgagg 16885 Query: 167 tg 168 || Sbjct: 16886 tg 16887 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 307 gcactgatgaaagcttttgtggatcacaacaag 339 |||||||||||||||||| |||||||||||||| Sbjct: 17272 gcactgatgaaagcttttctggatcacaacaag 17304
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 272 bits (137), Expect = 1e-69 Identities = 257/297 (86%) Strand = Plus / Plus Query: 338 agtttgggaatctgccattcggctttcgtgcaaacacatggcttgttcctcctgtatatg 397 ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| |||| Sbjct: 32874558 agtttgggaatctaccatacggatttcgtgcaaacacatggcttattcctcctatatact 32874617 Query: 398 tggattctgctacgaagagcccagctttgcccgctgaggatgagaactggggtgggaatg 457 ||||||||||||| ||| ||||||| || || | |||||||||||| |||||||| || | Sbjct: 32874618 tggattctgctacaaagtgcccagcattaccagttgaggatgagaattggggtggaaacg 32874677 Query: 458 gaggtggctgcggacgagacggaaaacatgaccggagacgctgggcaagagaattttcta 517 | |||||| || ||||| ||||| ||||| | ||||| ||||||| ||||||||||| Sbjct: 32874678 ggggtggcaatgggcgagatggaaagtatgacagaagacgatgggcaaaagaattttcta 32874737 Query: 518 ttttggctagaatgccgtccaagactgaggaagagagggtgatcagagaccggaaggctt 577 ||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||||| Sbjct: 32874738 ctttggctagaatgccatgcaaaactgaggaagggagggtgatcagagaccggaaggctt 32874797 Query: 578 tccttttacacaacctgtttgtagatacagcgattttcagagctgcgtcgacaatac 634 | ||||||||||| || |||||||||||||| ||||| |||||||| || ||||||| Sbjct: 32874798 ttcttttacacaatctctttgtagatacagcaatttttagagctgcatcaacaatac 32874854 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 32873790 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 32873849 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccact 106 |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 32873850 acgacttcctctccttcgcccacctcaccccgcccgtccact 32873891 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 164 aggtgaaggtttgcaacgggaagcttctgcacatagttgcttcggccaagggattctacc 223 ||||||| |||||||| |||||||| |||||||| |||||||| | |||||| ||||| Sbjct: 32874146 aggtgaaagtttgcaatgggaagctcctgcacatcgttgcttccgtcaagggcttctatt 32874205 Query: 224 tggtgggcaagccgcacaccgtaagccggtccttggtggacctgctacagcagctcagca 283 || || |||||||||||||| |||| ||||||||||| ||| | || |||||||||| Sbjct: 32874206 cggcagggaagccgcacaccgtgagccactccttggtggatctgttgcaacagctcagca 32874265 Query: 284 gtggatttgccaatg 298 ||| ||||||||||| Sbjct: 32874266 gtgcatttgccaatg 32874280 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 107 ttatcaggaggaaggagaggaatggggctgcccaggacggcgattacttcgaaatcgagg 166 ||||||||||||||||||| ||||| ||| | ||||| ||||| |||||||||||||||| Sbjct: 32873977 ttatcaggaggaaggagagcaatggcgcttctcaggaaggcgactacttcgaaatcgagg 32874036 Query: 167 tg 168 || Sbjct: 32874037 tg 32874038 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 307 gcactgatgaaagcttttgtggatcacaacaag 339 |||||||||||||||||| |||||||||||||| Sbjct: 32874423 gcactgatgaaagcttttctggatcacaacaag 32874455
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 272 bits (137), Expect = 1e-69 Identities = 257/297 (86%) Strand = Plus / Plus Query: 338 agtttgggaatctgccattcggctttcgtgcaaacacatggcttgttcctcctgtatatg 397 ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| |||| Sbjct: 69931 agtttgggaatctaccatacggatttcgtgcaaacacatggcttattcctcctatatact 69990 Query: 398 tggattctgctacgaagagcccagctttgcccgctgaggatgagaactggggtgggaatg 457 ||||||||||||| ||| ||||||| || || | |||||||||||| |||||||| || | Sbjct: 69991 tggattctgctacaaagtgcccagcattaccagttgaggatgagaattggggtggaaacg 70050 Query: 458 gaggtggctgcggacgagacggaaaacatgaccggagacgctgggcaagagaattttcta 517 | |||||| || ||||| ||||| ||||| | ||||| ||||||| ||||||||||| Sbjct: 70051 ggggtggcaatgggcgagatggaaagtatgacagaagacgatgggcaaaagaattttcta 70110 Query: 518 ttttggctagaatgccgtccaagactgaggaagagagggtgatcagagaccggaaggctt 577 ||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||||| Sbjct: 70111 ctttggctagaatgccatgcaaaactgaggaagggagggtgatcagagaccggaaggctt 70170 Query: 578 tccttttacacaacctgtttgtagatacagcgattttcagagctgcgtcgacaatac 634 | ||||||||||| || |||||||||||||| ||||| |||||||| || ||||||| Sbjct: 70171 ttcttttacacaatctctttgtagatacagcaatttttagagctgcatcaacaatac 70227 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 69165 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 69224 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccact 106 |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 69225 acgacttcctctccttcgcccacctcaccccgcccgtccact 69266 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 164 aggtgaaggtttgcaacgggaagcttctgcacatagttgcttcggccaagggattctacc 223 ||||||| |||||||| |||||||| |||||||| |||||||| | |||||| ||||| Sbjct: 69521 aggtgaaagtttgcaatgggaagctcctgcacatcgttgcttccgtcaagggcttctatt 69580 Query: 224 tggtgggcaagccgcacaccgtaagccggtccttggtggacctgctacagcagctcagca 283 || || |||||||||||||| |||| ||||||||||| ||| | || |||||||||| Sbjct: 69581 cggcagggaagccgcacaccgtgagccactccttggtggatctgttgcaacagctcagca 69640 Query: 284 gtggatttgccaatg 298 ||| ||||||||||| Sbjct: 69641 gtgcatttgccaatg 69655 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 107 ttatcaggaggaaggagaggaatggggctgcccaggacggcgattacttcgaaatcgagg 166 ||||||||||||||||||| ||||| ||| | ||||| ||||| |||||||||||||||| Sbjct: 69352 ttatcaggaggaaggagagcaatggcgcttctcaggaaggcgactacttcgaaatcgagg 69411 Query: 167 tg 168 || Sbjct: 69412 tg 69413 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 307 gcactgatgaaagcttttgtggatcacaacaag 339 |||||||||||||||||| |||||||||||||| Sbjct: 69798 gcactgatgaaagcttttctggatcacaacaag 69830
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 272 bits (137), Expect = 1e-69 Identities = 257/297 (86%) Strand = Plus / Plus Query: 338 agtttgggaatctgccattcggctttcgtgcaaacacatggcttgttcctcctgtatatg 397 ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| |||| Sbjct: 136845 agtttgggaatctaccatacggatttcgtgcaaacacatggcttattcctcctatatact 136904 Query: 398 tggattctgctacgaagagcccagctttgcccgctgaggatgagaactggggtgggaatg 457 ||||||||||||| ||| ||||||| || || | |||||||||||| |||||||| || | Sbjct: 136905 tggattctgctacaaagtgcccagcattaccagttgaggatgagaattggggtggaaacg 136964 Query: 458 gaggtggctgcggacgagacggaaaacatgaccggagacgctgggcaagagaattttcta 517 | |||||| || ||||| ||||| ||||| | ||||| ||||||| ||||||||||| Sbjct: 136965 ggggtggcaatgggcgagatggaaagtatgacagaagacgatgggcaaaagaattttcta 137024 Query: 518 ttttggctagaatgccgtccaagactgaggaagagagggtgatcagagaccggaaggctt 577 ||||||||||||||| | ||| |||||||||| |||||||||||||||||||||||||| Sbjct: 137025 ctttggctagaatgccatgcaaaactgaggaagggagggtgatcagagaccggaaggctt 137084 Query: 578 tccttttacacaacctgtttgtagatacagcgattttcagagctgcgtcgacaatac 634 | ||||||||||| || |||||||||||||| ||||| |||||||| || ||||||| Sbjct: 137085 ttcttttacacaatctctttgtagatacagcaatttttagagctgcatcaacaatac 137141 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 5 cgatatcggcggcgcacgacatggtggccatcggcccgccgcccaagctcggagagttct 64 ||||||||| |||||||||||||| ||||||| | |||||||||| ||| || ||||||| Sbjct: 136077 cgatatcggaggcgcacgacatggcggccatccgtccgccgcccaggctgggcgagttct 136136 Query: 65 acgacttcttctccttcgcccacctcaccccgcccctccact 106 |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 136137 acgacttcctctccttcgcccacctcaccccgcccgtccact 136178 Score = 101 bits (51), Expect = 3e-18 Identities = 114/135 (84%) Strand = Plus / Plus Query: 164 aggtgaaggtttgcaacgggaagcttctgcacatagttgcttcggccaagggattctacc 223 ||||||| |||||||| |||||||| |||||||| |||||||| | |||||| ||||| Sbjct: 136433 aggtgaaagtttgcaatgggaagctcctgcacatcgttgcttccgtcaagggcttctatt 136492 Query: 224 tggtgggcaagccgcacaccgtaagccggtccttggtggacctgctacagcagctcagca 283 || || |||||||||||||| |||| ||||||||||| ||| | || |||||||||| Sbjct: 136493 cggcagggaagccgcacaccgtgagccactccttggtggatctgttgcaacagctcagca 136552 Query: 284 gtggatttgccaatg 298 ||| ||||||||||| Sbjct: 136553 gtgcatttgccaatg 136567 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 107 ttatcaggaggaaggagaggaatggggctgcccaggacggcgattacttcgaaatcgagg 166 ||||||||||||||||||| ||||| ||| | ||||| ||||| |||||||||||||||| Sbjct: 136264 ttatcaggaggaaggagagcaatggcgcttctcaggaaggcgactacttcgaaatcgagg 136323 Query: 167 tg 168 || Sbjct: 136324 tg 136325 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 307 gcactgatgaaagcttttgtggatcacaacaag 339 |||||||||||||||||| |||||||||||||| Sbjct: 136710 gcactgatgaaagcttttctggatcacaacaag 136742
>dbj|AK067390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103F03, full insert sequence Length = 2646 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 39 cccgccgcccaagctcggagagttctacgacttcttctccttcgcccacctcaccccgcc 98 ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||| ||||||| Sbjct: 793 cccgccgccgaagctgggacagttctacgagttcttctccttctcccacctctccccgcc 852 Query: 99 cctccactttatcaggagg 117 |||||| | ||| |||||| Sbjct: 853 cctccattatattaggagg 871
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 39 cccgccgcccaagctcggagagttctacgacttcttctccttcgcccacctcaccccgcc 98 ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||| ||||||| Sbjct: 8817925 cccgccgccgaagctgggacagttctacgagttcttctccttctcccacctctccccgcc 8817866 Query: 99 cctcca 104 |||||| Sbjct: 8817865 cctcca 8817860
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 39 cccgccgcccaagctcggagagttctacgacttcttctccttcgcccacctcaccccgcc 98 ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||| ||||||| Sbjct: 22943 cccgccgccgaagctgggacagttctacgagttcttctccttctcccacctctccccgcc 22884 Query: 99 cctcca 104 |||||| Sbjct: 22883 cctcca 22878
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 39 cccgccgcccaagctcggagagttctacgacttcttctccttcgcccacctcaccccgcc 98 ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||| ||||||| Sbjct: 117004 cccgccgccgaagctgggacagttctacgagttcttctccttctcccacctctccccgcc 116945 Query: 99 cctcca 104 |||||| Sbjct: 116944 cctcca 116939
>ref|XM_477727.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5802 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 61 ttctacgacttcttctccttcgcccacctcaccccgcccctccactttat 110 ||||| || ||||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 634 ttctatgagttcttctccctcgccaacctcactccgcccctccactttat 683 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 431 ctgaggatgagaactggggtgggaatggaggtgg 464 |||||||||| | ||||||||| ||||||||||| Sbjct: 1013 ctgaggatgaaacctggggtggcaatggaggtgg 1046 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 361 tttcgtgcaaacacatggcttgttcc 386 |||||||||||||||||||| ||||| Sbjct: 943 tttcgtgcaaacacatggctcgttcc 968
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 61 ttctacgacttcttctccttcgcccacctcaccccgcccctccact 106 ||||| || ||||||||| ||||| ||||||| ||||||||||||| Sbjct: 13538220 ttctatgagttcttctccctcgccaacctcactccgcccctccact 13538265 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 431 ctgaggatgagaactggggtgggaatggaggtgg 464 |||||||||| | ||||||||| ||||||||||| Sbjct: 13540302 ctgaggatgaaacctggggtggcaatggaggtgg 13540335 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 361 tttcgtgcaaacacatggcttgttcc 386 |||||||||||||||||||| ||||| Sbjct: 13540232 tttcgtgcaaacacatggctcgttcc 13540257
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 61 ttctacgacttcttctccttcgcccacctcaccccgcccctccact 106 ||||| || ||||||||| ||||| ||||||| ||||||||||||| Sbjct: 117903 ttctatgagttcttctccctcgccaacctcactccgcccctccact 117948 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 431 ctgaggatgagaactggggtgggaatggaggtgg 464 |||||||||| | ||||||||| ||||||||||| Sbjct: 119985 ctgaggatgaaacctggggtggcaatggaggtgg 120018 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 361 tttcgtgcaaacacatggcttgttcc 386 |||||||||||||||||||| ||||| Sbjct: 119915 tttcgtgcaaacacatggctcgttcc 119940
>dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084P08 Length = 158656 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 61 ttctacgacttcttctccttcgcccacctcaccccgcccctccact 106 ||||| || ||||||||| ||||| ||||||| ||||||||||||| Sbjct: 5839 ttctatgagttcttctccctcgccaacctcactccgcccctccact 5884 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 431 ctgaggatgagaactggggtgggaatggaggtgg 464 |||||||||| | ||||||||| ||||||||||| Sbjct: 7921 ctgaggatgaaacctggggtggcaatggaggtgg 7954 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 361 tttcgtgcaaacacatggcttgttcc 386 |||||||||||||||||||| ||||| Sbjct: 7851 tttcgtgcaaacacatggctcgttcc 7876
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Minus Query: 430 gctgaggatgagaactggggtgggaatggaggtggc 465 ||||||||||| ||||||||||| ||||| |||||| Sbjct: 51668 gctgaggatgaaaactggggtggcaatggtggtggc 51633 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 544 gaggaagagagggtgatcagagaccggaaggctttccttttacacaacctgtttgtagat 603 ||||| |||||||||||||||||||| || ||||| || | ||||| | |||||| ||| Sbjct: 51554 gaggaggagagggtgatcagagaccgaaaagcttttctacttcacaatcagtttgttgat 51495 Query: 604 acagcgat 611 ||| |||| Sbjct: 51494 acatcgat 51487
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 544 gaggaagagagggtgatcagagaccggaaggctttccttttacacaacctgtttgtagat 603 ||||| |||||||||||||||||||| || ||||| || | ||||| | |||||| ||| Sbjct: 75464 gaggaggagagggtgatcagagaccgaaaagcttttctacttcacaatcagtttgttgat 75523 Query: 604 acagcgat 611 ||| |||| Sbjct: 75524 acatcgat 75531 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 430 gctgaggatgagaactggggtgggaatggaggtggc 465 ||||||||||| ||||||||||| ||||| |||||| Sbjct: 75350 gctgaggatgaaaactggggtggcaatggtggtggc 75385
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 cttgttcctcctgtatatgtgg 400 |||||||||||||||||||||| Sbjct: 756187 cttgttcctcctgtatatgtgg 756166 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 acgagacggaaaacatgaccggag 494 |||||||||||||||||| ||||| Sbjct: 258336 acgagacggaaaacatgatcggag 258359
>gb|AC021011.5| Homo sapiens BAC clone RP11-32K22 from 4, complete sequence Length = 43958 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 aagcttttgtggatcacaacaagttt 342 |||||||||||||||||| ||||||| Sbjct: 38017 aagcttttgtggatcacagcaagttt 38042
>gb|AE004914.1| Pseudomonas aeruginosa PAO1, section 475 of 529 of the complete genome Length = 11650 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 219 ctacctggtgggcaagccgcac 240 |||||||||||||||||||||| Sbjct: 10439 ctacctggtgggcaagccgcac 10460
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 cttgttcctcctgtatatgtgg 400 |||||||||||||||||||||| Sbjct: 41526 cttgttcctcctgtatatgtgg 41505
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 cttgttcctcctgtatatgtgg 400 |||||||||||||||||||||| Sbjct: 128728 cttgttcctcctgtatatgtgg 128707
>emb|AL645982.26| Mouse DNA sequence from clone DN-452A22 on chromosome 3 Contains the 5' end of the Fgf2 gene for fibroblast growth factor 2, a novel gene (A930011G24RIK), a mitochondrial ribosomal protein S33 (Mrps33) pseudogene, a novel gene (gene model 1805 (NCBI) (Gm1805)), the Cetn4 gene for centrin 4, a novel gene, the 5' end of the Il21 gene for interleukin 21 and a CpG island, complete sequence Length = 133023 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ctggggtgggaatggaggtgg 464 ||||||||||||||||||||| Sbjct: 104179 ctggggtgggaatggaggtgg 104159
>emb|CR931957.6| Mouse DNA sequence from clone RP23-21C14 on chromosome 2, complete sequence Length = 89566 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 tgggaatggaggtggctgcgg 470 ||||||||||||||||||||| Sbjct: 83749 tgggaatggaggtggctgcgg 83729
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 535 tccaagactgaggaagagagg 555 ||||||||||||||||||||| Sbjct: 2643385 tccaagactgaggaagagagg 2643365
>gb|AC108846.15| Mus musculus chromosome 9, clone RP23-12I4, complete sequence Length = 212729 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 agaactggggtgggaatggaggtgg 464 |||||||||||||| |||||||||| Sbjct: 149603 agaactggggtggggatggaggtgg 149579
>gb|AC116740.11| Mus musculus chromosome 3, clone RP23-446B17, complete sequence Length = 173065 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 aagactgaggaagagagggtg 558 ||||||||||||||||||||| Sbjct: 160523 aagactgaggaagagagggtg 160543
>gb|AC113992.8| Mus musculus chromosome 3, clone RP24-140K12, complete sequence Length = 146770 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 aagactgaggaagagagggtg 558 ||||||||||||||||||||| Sbjct: 133574 aagactgaggaagagagggtg 133554
>gb|AC170997.2| Mus musculus BAC clone RP24-198N9 from chromosome 9, complete sequence Length = 146891 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 agaactggggtgggaatggaggtgg 464 |||||||||||||| |||||||||| Sbjct: 16173 agaactggggtggggatggaggtgg 16149
>gb|U62809.1|BMU62809 Boophilus microplus angiotensin-converting enzyme-like protein (Bm91) mRNA, complete cds Length = 4387 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 acgagacggaaaacatgaccg 491 ||||||||||||||||||||| Sbjct: 793 acgagacggaaaacatgaccg 813
>emb|AL662862.16| Mouse DNA sequence from clone CT7-139P23 on chromosome 3, complete sequence Length = 120808 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ctggggtgggaatggaggtgg 464 ||||||||||||||||||||| Sbjct: 23179 ctggggtgggaatggaggtgg 23159
>gb|AC168980.1| Mus musculus BAC clone RP24-484L12 from chromosome 17, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cccacctcaccccgcccctc 102 |||||||||||||||||||| Sbjct: 114645 cccacctcaccccgcccctc 114626
>ref|XM_612582.2| PREDICTED: Bos taurus non-muscle myosin heavy chain (LOC404108), partial mRNA Length = 6279 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tgggcaagagaattttctat 518 |||||||||||||||||||| Sbjct: 5231 tgggcaagagaattttctat 5250
>ref|XM_864762.1| PREDICTED: Bos taurus similar to G protein-coupled receptor 154 isoform B, transcript variant 2 (LOC519486), mRNA Length = 1441 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggaaggagaggaatggggct 135 |||||||||||||||||||| Sbjct: 105 ggaaggagaggaatggggct 124
>ref|XM_874073.1| PREDICTED: Bos taurus similar to G protein-coupled receptor 154 isoform B, transcript variant 3 (LOC519486), mRNA Length = 1243 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggaaggagaggaatggggct 135 |||||||||||||||||||| Sbjct: 105 ggaaggagaggaatggggct 124
>ref|XM_597706.2| PREDICTED: Bos taurus similar to G protein-coupled receptor 154 isoform B, transcript variant 1 (LOC519486), mRNA Length = 993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ggaaggagaggaatggggct 135 |||||||||||||||||||| Sbjct: 105 ggaaggagaggaatggggct 124
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gaggaaggagaggaatgggg 133 |||||||||||||||||||| Sbjct: 13731890 gaggaaggagaggaatgggg 13731909
>ref|XM_755079.1| Ustilago maydis 521 hypothetical protein (UM04025.1) partial mRNA Length = 1992 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 cgaagagcccagctttgccc 429 |||||||||||||||||||| Sbjct: 1017 cgaagagcccagctttgccc 1036
>gb|AC164314.5| Mus musculus BAC clone RP23-17J18 from chromosome 17, complete sequence Length = 212588 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cccacctcaccccgcccctc 102 |||||||||||||||||||| Sbjct: 201537 cccacctcaccccgcccctc 201518
>emb|AL591214.8| Human DNA sequence from clone RP11-18I23 on chromosome 9 Contains part of one variant of the ROR2 gene for receptor tyrosine kinase-like orphan receptor 2, complete sequence Length = 66959 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tggggtgggaatggaggtgg 464 |||||||||||||||||||| Sbjct: 31007 tggggtgggaatggaggtgg 30988
>emb|AL354754.9| Human DNA sequence from clone RP11-281A20 on chromosome 9 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 115532 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tccactttatcaggaggaaggaga 124 |||||||||||||||||| ||||| Sbjct: 105785 tccactttatcaggaggatggaga 105808
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 acaacctgtttgtagataca 606 |||||||||||||||||||| Sbjct: 997240 acaacctgtttgtagataca 997221
>emb|AL713956.13| Mouse DNA sequence from clone RP23-412C18 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 138860 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 aggatgagaactggggtggg 453 |||||||||||||||||||| Sbjct: 19670 aggatgagaactggggtggg 19689
>gb|AC055758.23| Homo sapiens 3 BAC RP11-88H10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173456 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agcagctcagcagtggattt 291 |||||||||||||||||||| Sbjct: 116993 agcagctcagcagtggattt 116974
>gb|AC093230.2| Homo sapiens chromosome 19 clone LLNLF-130H12, complete sequence Length = 46127 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ggtgggaatggaggtggctg 467 |||||||||||||||||||| Sbjct: 3213 ggtgggaatggaggtggctg 3232
>ref|NM_166310.1| Drosophila melanogaster CG15096-RB, transcript variant B (CG15096), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 1403 ggattctacctggtgggcaa 1422
>ref|NM_137532.2| Drosophila melanogaster CG15096-RA, transcript variant A (CG15096), mRNA Length = 2070 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 1672 ggattctacctggtgggcaa 1691
>gb|AC025205.12| Homo sapiens chromosome 17, clone RP11-140O10, complete sequence Length = 188417 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ctttatcaggaggaaggagaggaa 128 ||||| |||||||||||||||||| Sbjct: 92889 ctttaccaggaggaaggagaggaa 92912
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gaggaaggagaggaatgggg 133 |||||||||||||||||||| Sbjct: 8418 gaggaaggagaggaatgggg 8437
>gb|AY060811.1| Drosophila melanogaster GH28013 full length cDNA Length = 1115 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 719 ggattctacctggtgggcaa 738
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 182940 ggattctacctggtgggcaa 182921
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 38440 ggattctacctggtgggcaa 38421
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gaggaaggagaggaatgggg 133 |||||||||||||||||||| Sbjct: 13726865 gaggaaggagaggaatgggg 13726884
>gb|AC007820.5|AC007820 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone BACR12J15, complete sequence Length = 198734 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 actgaggaagagagggtgat 560 |||||||||||||||||||| Sbjct: 132546 actgaggaagagagggtgat 132527
>gb|AC092311.3| Homo sapiens chromosome 19 clone LLNLR-278C11, complete sequence Length = 27896 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 ggtgggaatggaggtggctg 467 |||||||||||||||||||| Sbjct: 21574 ggtgggaatggaggtggctg 21555
>gb|AC012616.7| Homo sapiens chromosome 19 clone CTD-2557P19, complete sequence Length = 95328 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ggtgggaatggaggtggctg 467 |||||||||||||||||||| Sbjct: 91208 ggtgggaatggaggtggctg 91227
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gaggaaggagaggaatgggg 133 |||||||||||||||||||| Sbjct: 122562 gaggaaggagaggaatgggg 122581
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 acgagacggaaaacatgaccggag 494 |||||||||||||||||| ||||| Sbjct: 6935 acgagacggaaaacatgatcggag 6958
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 acgagacggaaaacatgaccggag 494 |||||||||||||||||| ||||| Sbjct: 153834 acgagacggaaaacatgatcggag 153857
>gb|BT021280.1| Drosophila melanogaster RE40577 full insert cDNA Length = 2064 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 1672 ggattctacctggtgggcaa 1691
>gb|AC006578.5|AC006578 Homo sapiens chromosome 17, clone 27_J_12, complete sequence Length = 76988 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ctttatcaggaggaaggagaggaa 128 ||||| |||||||||||||||||| Sbjct: 32677 ctttaccaggaggaaggagaggaa 32654
>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete sequence Length = 239051 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 actgaggaagagagggtgat 560 |||||||||||||||||||| Sbjct: 222198 actgaggaagagagggtgat 222179
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 179404 ggattctacctggtgggcaa 179385
>gb|BT001852.1| Drosophila melanogaster RH60267 full insert cDNA Length = 1797 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 1404 ggattctacctggtgggcaa 1423
>gb|AC004345.1|AC004345 Drosophila melanogaster DNA sequence (P1 DS07069 (D244)), complete sequence Length = 86419 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggattctacctggtgggcaa 233 |||||||||||||||||||| Sbjct: 33778 ggattctacctggtgggcaa 33797
>gb|AC122413.4| Mus musculus BAC clone RP24-148B13 from 17, complete sequence Length = 172633 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cccacctcaccccgcccctc 102 |||||||||||||||||||| Sbjct: 85225 cccacctcaccccgcccctc 85206 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,676,691 Number of Sequences: 3902068 Number of extensions: 5676691 Number of successful extensions: 119058 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118630 Number of HSP's gapped (non-prelim): 426 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)