ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4k04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464428.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2150 Score = 565 bits (285), Expect = e-158 Identities = 552/641 (86%) Strand = Plus / Plus Query: 1 aagtttgtctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagcc 60 |||||||||||||| || ||||||||||| || ||||| || || || |||||||||||| Sbjct: 1008 aagtttgtctaccttggagatgttcaggtcaaaagtgagctgccaagtactttcaaagcc 1067 Query: 61 ttccggtttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctg 120 || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1068 tttcggtttcagcagcacaggtggtcatgtgggccggcaaacctgttcaggaagatgctg 1127 Query: 121 ttggagattgtgacaaacaagaaagtgacaatctggaagaaattccatgtcatctacaac 180 |||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1128 atggagattgtgagaaataagaaagtgacaatctggaagaagattcatgtcatctacaac 1187 Query: 181 ttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctactgcataatc 240 ||||| ||| | ||||| ||| |||| ||||| ||||| || | ||||||||| | || Sbjct: 1188 ttctttttgatccgcaaaatcatcgcgcacatcgtgacctttgcgttctactgcttgatt 1247 Query: 241 atcccgacaaccatctttgtccctgaggttcatataccaaagtggggttgcgtctacatt 300 |||||| |||| ||||||||||||||||| |||||||||||||| || || |||||| Sbjct: 1248 atcccggcaactatctttgtccctgaggtcaggataccaaagtggggctgtgtgtacatt 1307 Query: 301 ccaaccatcatcaccctcctcaattctgttggaactcccaggtctttccacttgcttttc 360 || || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1308 cccacaatcatcacccttctcaattccgttggaactcccaggtcttttcacttgcttttc 1367 Query: 361 ttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccacattgattggc 420 |||||||||||||| || || |||||||| ||||||||||| |||||||| | || ||| Sbjct: 1368 ttctggatcctctttgagaatgtcatgtcactgcatagaacaaaggccactctcatcggc 1427 Query: 421 ttgttagaggcaggcagggcgaatgaatgggtcgtcacggagaagctcggcagcgccatg 480 ||||||| || || |||||||| |||||||||||||| ||||||||||||| ||| || Sbjct: 1428 ctgttagaagccggtagggcgaacgaatgggtcgtcaccgagaagctcggcaacgctctg 1487 Query: 481 aagatgaaatccgctaacaaagcatcagccaggaagtcattcatgaggatgtgggagagg 540 ||||||||||| | | |||| ||||||||| ||| || ||||||||| | ||||| ||| Sbjct: 1488 aagatgaaatcatcaagcaaatcatcagccaagaaatcgttcatgagggtatgggacagg 1547 Query: 541 ttaaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtc 600 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | Sbjct: 1548 ctaaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatctt 1607 Query: 601 gcgttcgggaaggacaatttcttcatataccttttcttcca 641 || |||||||||||| |||||||||| ||||| |||||||| Sbjct: 1608 gcattcgggaaggaccatttcttcatctacctcttcttcca 1648
>dbj|AK102694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103E20, full insert sequence Length = 2151 Score = 565 bits (285), Expect = e-158 Identities = 552/641 (86%) Strand = Plus / Plus Query: 1 aagtttgtctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagcc 60 |||||||||||||| || ||||||||||| || ||||| || || || |||||||||||| Sbjct: 1008 aagtttgtctaccttggagatgttcaggtcaaaagtgagctgccaagtactttcaaagcc 1067 Query: 61 ttccggtttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctg 120 || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 1068 tttcggtttcagcagcacaggtggtcatgtgggccggcaaacctgttcaggaagatgctg 1127 Query: 121 ttggagattgtgacaaacaagaaagtgacaatctggaagaaattccatgtcatctacaac 180 |||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1128 atggagattgtgagaaataagaaagtgacaatctggaagaagattcatgtcatctacaac 1187 Query: 181 ttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctactgcataatc 240 ||||| ||| | ||||| ||| |||| ||||| ||||| || | ||||||||| | || Sbjct: 1188 ttctttttgatccgcaaaatcatcgcgcacatcgtgacctttgcgttctactgcttgatt 1247 Query: 241 atcccgacaaccatctttgtccctgaggttcatataccaaagtggggttgcgtctacatt 300 |||||| |||| ||||||||||||||||| |||||||||||||| || || |||||| Sbjct: 1248 atcccggcaactatctttgtccctgaggtcaggataccaaagtggggctgtgtgtacatt 1307 Query: 301 ccaaccatcatcaccctcctcaattctgttggaactcccaggtctttccacttgcttttc 360 || || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 1308 cccacaatcatcacccttctcaattccgttggaactcccaggtcttttcacttgcttttc 1367 Query: 361 ttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccacattgattggc 420 |||||||||||||| || || |||||||| ||||||||||| |||||||| | || ||| Sbjct: 1368 ttctggatcctctttgagaatgtcatgtcactgcatagaacaaaggccactctcatcggc 1427 Query: 421 ttgttagaggcaggcagggcgaatgaatgggtcgtcacggagaagctcggcagcgccatg 480 ||||||| || || |||||||| |||||||||||||| ||||||||||||| ||| || Sbjct: 1428 ctgttagaagccggtagggcgaacgaatgggtcgtcaccgagaagctcggcaacgctctg 1487 Query: 481 aagatgaaatccgctaacaaagcatcagccaggaagtcattcatgaggatgtgggagagg 540 ||||||||||| | | |||| ||||||||| ||| || ||||||||| | ||||| ||| Sbjct: 1488 aagatgaaatcatcaagcaaatcatcagccaagaaatcgttcatgagggtatgggacagg 1547 Query: 541 ttaaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtc 600 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | Sbjct: 1548 ctaaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatctt 1607 Query: 601 gcgttcgggaaggacaatttcttcatataccttttcttcca 641 || |||||||||||| |||||||||| ||||| |||||||| Sbjct: 1608 gcattcgggaaggaccatttcttcatctacctcttcttcca 1648
>dbj|AK059580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B02, full insert sequence Length = 1550 Score = 565 bits (285), Expect = e-158 Identities = 552/641 (86%) Strand = Plus / Plus Query: 1 aagtttgtctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagcc 60 |||||||||||||| || ||||||||||| || ||||| || || || |||||||||||| Sbjct: 444 aagtttgtctaccttggagatgttcaggtcaaaagtgagctgccaagtactttcaaagcc 503 Query: 61 ttccggtttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctg 120 || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 504 tttcggtttcagcagcacaggtggtcatgtgggccggcaaacctgttcaggaagatgctg 563 Query: 121 ttggagattgtgacaaacaagaaagtgacaatctggaagaaattccatgtcatctacaac 180 |||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 564 atggagattgtgagaaataagaaagtgacaatctggaagaagattcatgtcatctacaac 623 Query: 181 ttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctactgcataatc 240 ||||| ||| | ||||| ||| |||| ||||| ||||| || | ||||||||| | || Sbjct: 624 ttctttttgatccgcaaaatcatcgcgcacatcgtgacctttgcgttctactgcttgatt 683 Query: 241 atcccgacaaccatctttgtccctgaggttcatataccaaagtggggttgcgtctacatt 300 |||||| |||| ||||||||||||||||| |||||||||||||| || || |||||| Sbjct: 684 atcccggcaactatctttgtccctgaggtcaggataccaaagtggggctgtgtgtacatt 743 Query: 301 ccaaccatcatcaccctcctcaattctgttggaactcccaggtctttccacttgcttttc 360 || || ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 744 cccacaatcatcacccttctcaattccgttggaactcccaggtcttttcacttgcttttc 803 Query: 361 ttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccacattgattggc 420 |||||||||||||| || || |||||||| ||||||||||| |||||||| | || ||| Sbjct: 804 ttctggatcctctttgagaatgtcatgtcactgcatagaacaaaggccactctcatcggc 863 Query: 421 ttgttagaggcaggcagggcgaatgaatgggtcgtcacggagaagctcggcagcgccatg 480 ||||||| || || |||||||| |||||||||||||| ||||||||||||| ||| || Sbjct: 864 ctgttagaagccggtagggcgaacgaatgggtcgtcaccgagaagctcggcaacgctctg 923 Query: 481 aagatgaaatccgctaacaaagcatcagccaggaagtcattcatgaggatgtgggagagg 540 ||||||||||| | | |||| ||||||||| ||| || ||||||||| | ||||| ||| Sbjct: 924 aagatgaaatcatcaagcaaatcatcagccaagaaatcgttcatgagggtatgggacagg 983 Query: 541 ttaaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtc 600 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | Sbjct: 984 ctaaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatctt 1043 Query: 601 gcgttcgggaaggacaatttcttcatataccttttcttcca 641 || |||||||||||| |||||||||| ||||| |||||||| Sbjct: 1044 gcattcgggaaggaccatttcttcatctacctcttcttcca 1084
>gb|AY104830.1| Zea mays PCO115279 mRNA sequence Length = 848 Score = 446 bits (225), Expect = e-122 Identities = 501/593 (84%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctgttcagg 111 ||||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||||||| Sbjct: 57 ttcaaggccttccggttccagcagcacaggtggtcgtgcggcccggcgaacctgttcagg 116 Query: 112 aagatgctgttggagattgtgacaaacaagaaagtgacaatctggaagaaattccatgtc 171 |||||||| ||||||||||||| |||||||||||||| ||||||||||| |||| ||| Sbjct: 117 aagatgctcatggagattgtgacgaacaagaaagtgacgatctggaagaagatccacgtc 176 Query: 172 atctacaacttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctac 231 ||||||||||||||| || | ||||||||| |||| ||||| | || ||| | |||||| Sbjct: 177 atctacaacttcttcctgatacgcaagatcatcgcgcacatcatcaccttctcgttctac 236 Query: 232 tgcataatcatcccgacaaccatctttgtccctgaggttcatataccaaagtggggttgc 291 ||| | ||||||||| |||||||||| ||||| ||||| | ||||| |||||||| ||| Sbjct: 237 tgcgtcatcatcccggcaaccatcttcgtccccgaggtccgcatacccaagtggggctgc 296 Query: 292 gtctacattccaaccatcatcaccctcctcaattctgttggaactcccaggtctttccac 351 |||||||| || | ||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 297 gtctacatcccctcggccatcaccctcctcaactctgtcggcactcccaggtctttccac 356 Query: 352 ttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccaca 411 |||||||||||||| || |||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 357 ctgcttttcttctgggtcgccttcgagaacgtcatgtccctgcacagaacaaaggccacg 416 Query: 412 ttgattggcttgttagaggcaggcagggcgaatgaatgggtcgtcacggagaagctcggc 471 |||| |||||| | ||||| |||||||| || || ||||| || |||| |||||||||| Sbjct: 417 ctgatcggcttgctggaggccggcagggccaacgagtgggtggtgacggcgaagctcggc 476 Query: 472 agcgccatgaagatgaaatccgctaacaaagcatcagccaggaagtcattcatgaggatg 531 |||||||||||||||||||| ||||||||||| ||||||| ||||||||||| Sbjct: 477 agcgccatgaagatgaaatcggctaacaaagcggggctcaggaagcagttcatgaggata 536 Query: 532 tgggagaggttaaacgttccggagctcggcgtgggagccttcctcttctcatgtggatgg 591 ||||||||| | |||| |||||||||| |||| ||||||||||||||| || || ||| Sbjct: 537 tgggagaggctgcacgtcacggagctcggggtggcagccttcctcttctcctgcggctgg 596 Query: 592 tacgatgtcgcgttcgggaaggacaatttcttcatataccttttcttccagtc 644 |||||| | |||| ||||| |||| |||||||||| ||||| ||||||||||| Sbjct: 597 tacgatcttgcgtacgggagggaccatttcttcatctacctcttcttccagtc 649
>tpg|BK000080.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like A1 gene, complete cds Length = 7506 Score = 167 bits (84), Expect = 6e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 |||||||||||||||||||||| | |||||||||||||||||||| ||| | ||||| | Sbjct: 5724 agaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaa 5783 Query: 200 tcgtcgcccacattgtgacattcaccttctactgcataatcatcccgacaaccatctttg 259 || |||| ||||| ||||| || | ||||||||| | || |||||| |||| ||||||| Sbjct: 5784 tcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttg 5843 Query: 260 tccctgaggttcatataccaaagtggggttgcgtctacattccaaccatcatcaccctcc 319 |||||||||| |||||||||||||| || || |||||||| || ||||||||||| | Sbjct: 5844 tccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttc 5903 Query: 320 tcaattctgttggaactcccaggt 343 ||||||| |||||||||||||||| Sbjct: 5904 tcaattccgttggaactcccaggt 5927 Score = 165 bits (83), Expect = 2e-37 Identities = 173/203 (85%) Strand = Plus / Plus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 ||||||||| |||||||||||||||||||||||||| || || |||||||| |||||||| Sbjct: 6050 caggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatag 6109 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggtcgtcac 458 ||| |||||||| | || ||| ||||||| || || |||||||| |||||||||||||| Sbjct: 6110 aacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcac 6169 Query: 459 ggagaagctcggcagcgccatgaagatgaaatccgctaacaaagcatcagccaggaagtc 518 ||||||||||||| ||| ||||||||||||| | | |||| ||||||||| ||| || Sbjct: 6170 cgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatc 6229 Query: 519 attcatgaggatgtgggagaggt 541 ||||||||| | ||||| |||| Sbjct: 6230 gttcatgagggtatgggacaggt 6252 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 23 ttcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagat 82 ||||||| || ||||| || || || |||||||||||||| ||||||||||||||||| | Sbjct: 5512 ttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggt 5571 Query: 83 ggtcttgtggtccggcaaacctgttcaggaagatgctgttggagattgtga 133 |||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 5572 ggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtga 5622 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 542 taaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtcg 601 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | | Sbjct: 6356 taaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttg 6415 Query: 602 cgttcgggaaggacaatttcttcatataccttttcttcca 641 | |||||||||||| |||||||||| ||||| |||||||| Sbjct: 6416 cattcgggaaggaccatttcttcatctacctcttcttcca 6455 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 aagtttgtctacctcggcgatgttcaggt 29 |||||||||||||| || ||||||||||| Sbjct: 5300 aagtttgtctaccttggagatgttcaggt 5328
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 167 bits (84), Expect = 6e-38 Identities = 174/204 (85%) Strand = Plus / Minus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 |||||||||||||||||||||| | |||||||||||||||||||| ||| | ||||| | Sbjct: 5153016 agaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaa 5152957 Query: 200 tcgtcgcccacattgtgacattcaccttctactgcataatcatcccgacaaccatctttg 259 || |||| ||||| ||||| || | ||||||||| | || |||||| |||| ||||||| Sbjct: 5152956 tcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttg 5152897 Query: 260 tccctgaggttcatataccaaagtggggttgcgtctacattccaaccatcatcaccctcc 319 |||||||||| |||||||||||||| || || |||||||| || ||||||||||| | Sbjct: 5152896 tccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttc 5152837 Query: 320 tcaattctgttggaactcccaggt 343 ||||||| |||||||||||||||| Sbjct: 5152836 tcaattccgttggaactcccaggt 5152813 Score = 165 bits (83), Expect = 2e-37 Identities = 173/203 (85%) Strand = Plus / Minus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 ||||||||| |||||||||||||||||||||||||| || || |||||||| |||||||| Sbjct: 5152690 caggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatag 5152631 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggtcgtcac 458 ||| |||||||| | || ||| ||||||| || || |||||||| |||||||||||||| Sbjct: 5152630 aacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcac 5152571 Query: 459 ggagaagctcggcagcgccatgaagatgaaatccgctaacaaagcatcagccaggaagtc 518 ||||||||||||| ||| ||||||||||||| | | |||| ||||||||| ||| || Sbjct: 5152570 cgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatc 5152511 Query: 519 attcatgaggatgtgggagaggt 541 ||||||||| | ||||| |||| Sbjct: 5152510 gttcatgagggtatgggacaggt 5152488 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 23 ttcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagat 82 ||||||| || ||||| || || || |||||||||||||| ||||||||||||||||| | Sbjct: 5153228 ttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggt 5153169 Query: 83 ggtcttgtggtccggcaaacctgttcaggaagatgctgttggagattgtga 133 |||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 5153168 ggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtga 5153118 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 542 taaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtcg 601 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | | Sbjct: 5152384 taaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttg 5152325 Query: 602 cgttcgggaaggacaatttcttcatataccttttcttcca 641 | |||||||||||| |||||||||| ||||| |||||||| Sbjct: 5152324 cattcgggaaggaccatttcttcatctacctcttcttcca 5152285 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 aagtttgtctacctcggcgatgttcaggt 29 |||||||||||||| || ||||||||||| Sbjct: 5153440 aagtttgtctaccttggagatgttcaggt 5153412
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 167 bits (84), Expect = 6e-38 Identities = 174/204 (85%) Strand = Plus / Minus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 |||||||||||||||||||||| | |||||||||||||||||||| ||| | ||||| | Sbjct: 113514 agaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaa 113455 Query: 200 tcgtcgcccacattgtgacattcaccttctactgcataatcatcccgacaaccatctttg 259 || |||| ||||| ||||| || | ||||||||| | || |||||| |||| ||||||| Sbjct: 113454 tcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttg 113395 Query: 260 tccctgaggttcatataccaaagtggggttgcgtctacattccaaccatcatcaccctcc 319 |||||||||| |||||||||||||| || || |||||||| || ||||||||||| | Sbjct: 113394 tccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttc 113335 Query: 320 tcaattctgttggaactcccaggt 343 ||||||| |||||||||||||||| Sbjct: 113334 tcaattccgttggaactcccaggt 113311 Score = 165 bits (83), Expect = 2e-37 Identities = 173/203 (85%) Strand = Plus / Minus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 ||||||||| |||||||||||||||||||||||||| || || |||||||| |||||||| Sbjct: 113188 caggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatag 113129 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggtcgtcac 458 ||| |||||||| | || ||| ||||||| || || |||||||| |||||||||||||| Sbjct: 113128 aacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcac 113069 Query: 459 ggagaagctcggcagcgccatgaagatgaaatccgctaacaaagcatcagccaggaagtc 518 ||||||||||||| ||| ||||||||||||| | | |||| ||||||||| ||| || Sbjct: 113068 cgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatc 113009 Query: 519 attcatgaggatgtgggagaggt 541 ||||||||| | ||||| |||| Sbjct: 113008 gttcatgagggtatgggacaggt 112986 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 23 ttcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagat 82 ||||||| || ||||| || || || |||||||||||||| ||||||||||||||||| | Sbjct: 113726 ttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggt 113667 Query: 83 ggtcttgtggtccggcaaacctgttcaggaagatgctgttggagattgtga 133 |||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 113666 ggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtga 113616 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 542 taaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtcg 601 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | | Sbjct: 112882 taaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttg 112823 Query: 602 cgttcgggaaggacaatttcttcatataccttttcttcca 641 | |||||||||||| |||||||||| ||||| |||||||| Sbjct: 112822 cattcgggaaggaccatttcttcatctacctcttcttcca 112783 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 aagtttgtctacctcggcgatgttcaggt 29 |||||||||||||| || ||||||||||| Sbjct: 113938 aagtttgtctaccttggagatgttcaggt 113910
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 167 bits (84), Expect = 6e-38 Identities = 174/204 (85%) Strand = Plus / Minus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 |||||||||||||||||||||| | |||||||||||||||||||| ||| | ||||| | Sbjct: 46469 agaaagtgacaatctggaagaagattcatgtcatctacaacttctttttgatccgcaaaa 46410 Query: 200 tcgtcgcccacattgtgacattcaccttctactgcataatcatcccgacaaccatctttg 259 || |||| ||||| ||||| || | ||||||||| | || |||||| |||| ||||||| Sbjct: 46409 tcatcgcgcacatcgtgacctttgcgttctactgcttgattatcccggcaactatctttg 46350 Query: 260 tccctgaggttcatataccaaagtggggttgcgtctacattccaaccatcatcaccctcc 319 |||||||||| |||||||||||||| || || |||||||| || ||||||||||| | Sbjct: 46349 tccctgaggtcaggataccaaagtggggctgtgtgtacattcccacaatcatcacccttc 46290 Query: 320 tcaattctgttggaactcccaggt 343 ||||||| |||||||||||||||| Sbjct: 46289 tcaattccgttggaactcccaggt 46266 Score = 165 bits (83), Expect = 2e-37 Identities = 173/203 (85%) Strand = Plus / Minus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 ||||||||| |||||||||||||||||||||||||| || || |||||||| |||||||| Sbjct: 46143 caggtcttttcacttgcttttcttctggatcctctttgagaatgtcatgtcactgcatag 46084 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggtcgtcac 458 ||| |||||||| | || ||| ||||||| || || |||||||| |||||||||||||| Sbjct: 46083 aacaaaggccactctcatcggcctgttagaagccggtagggcgaacgaatgggtcgtcac 46024 Query: 459 ggagaagctcggcagcgccatgaagatgaaatccgctaacaaagcatcagccaggaagtc 518 ||||||||||||| ||| ||||||||||||| | | |||| ||||||||| ||| || Sbjct: 46023 cgagaagctcggcaacgctctgaagatgaaatcatcaagcaaatcatcagccaagaaatc 45964 Query: 519 attcatgaggatgtgggagaggt 541 ||||||||| | ||||| |||| Sbjct: 45963 gttcatgagggtatgggacaggt 45941 Score = 133 bits (67), Expect = 8e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 23 ttcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagat 82 ||||||| || ||||| || || || |||||||||||||| ||||||||||||||||| | Sbjct: 46681 ttcaggtcaaaagtgagctgccaagtactttcaaagcctttcggtttcagcagcacaggt 46622 Query: 83 ggtcttgtggtccggcaaacctgttcaggaagatgctgttggagattgtga 133 |||| ||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 46621 ggtcatgtgggccggcaaacctgttcaggaagatgctgatggagattgtga 46571 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Minus Query: 542 taaacgttccggagctcggcgtgggagccttcctcttctcatgtggatggtacgatgtcg 601 ||||||| ||||||||||||||| || ||||||||||| ||||||||||| ||| | | Sbjct: 45837 taaacgtcacggagctcggcgtggcggcattcctcttctcctgtggatggtatgatcttg 45778 Query: 602 cgttcgggaaggacaatttcttcatataccttttcttcca 641 | |||||||||||| |||||||||| ||||| |||||||| Sbjct: 45777 cattcgggaaggaccatttcttcatctacctcttcttcca 45738 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 aagtttgtctacctcggcgatgttcaggt 29 |||||||||||||| || ||||||||||| Sbjct: 46893 aagtttgtctaccttggagatgttcaggt 46865
>gb|AF432499.1|AF432499 Oryza sativa cellulose synthase-like protein OsCslA9 gene, complete cds Length = 4884 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 |||||| || ||||| ||| |||| ||| |||||||||| || || ||||| |||||||| Sbjct: 3958 caggtcattgcacttacttatcttttgggtcctcttcgagaatgttatgtcactgcatag 4017 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggt 452 ||| |||||||| |||| ||| |||||||| ||||||||| |||||||||||| Sbjct: 4018 aacaaaggccacgctgatcggcctgttagagacaggcagggtgaatgaatgggt 4071 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccggtttcagcagcacagatggtcttgtggt 93 |||||||| || || || |||||||| ||||||| ||| || ||||||||||| || || Sbjct: 3422 agtgaacttccaagtacattcaaagcattccggtatcaacaacacagatggtcctgcgga 3481 Query: 94 ccggcaaacctgttcaggaagatgctgttggagattgtgacaaacaag 141 |||||||||||||||||||| ||| || ||||||||| ||||||||| Sbjct: 3482 ccggcaaacctgttcaggaaaatgttggtggagattgccacaaacaag 3529 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 ||||||||||| | |||||||| || |||| |||||||||||||| ||||||||||||| Sbjct: 3618 agaaagtgacattgtggaagaagatctatgtgatctacaacttctttttggtgcgcaaga 3677 Query: 200 t 200 | Sbjct: 3678 t 3678
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 |||||| || ||||| ||| |||| ||| |||||||||| || || ||||| |||||||| Sbjct: 24851363 caggtcattgcacttacttatcttttgggtcctcttcgagaatgttatgtcactgcatag 24851422 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggt 452 ||| |||||||| |||| ||| |||||||| ||||||||| |||||||||||| Sbjct: 24851423 aacaaaggccacgctgatcggcctgttagagacaggcagggtgaatgaatgggt 24851476 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccggtttcagcagcacagatggtcttgtggt 93 |||||||| || || || |||||||| ||||||| ||| || ||||||||||| || || Sbjct: 24850827 agtgaacttccaagtacattcaaagcattccggtatcaacaacacagatggtcctgcgga 24850886 Query: 94 ccggcaaacctgttcaggaagatgctgttggagattgtgacaaacaag 141 |||||||||||||||||||| ||| || ||||||||| ||||||||| Sbjct: 24850887 ccggcaaacctgttcaggaaaatgttggtggagattgccacaaacaag 24850934 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 ||||||||||| | |||||||| || |||| |||||||||||||| ||||||||||||| Sbjct: 24851023 agaaagtgacattgtggaagaagatctatgtgatctacaacttctttttggtgcgcaaga 24851082 Query: 200 t 200 | Sbjct: 24851083 t 24851083
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 91.7 bits (46), Expect = 3e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 339 caggtctttccacttgcttttcttctggatcctcttcgaaaacgtcatgtcgctgcatag 398 |||||| || ||||| ||| |||| ||| |||||||||| || || ||||| |||||||| Sbjct: 62446 caggtcattgcacttacttatcttttgggtcctcttcgagaatgttatgtcactgcatag 62505 Query: 399 aaccaaggccacattgattggcttgttagaggcaggcagggcgaatgaatgggt 452 ||| |||||||| |||| ||| |||||||| ||||||||| |||||||||||| Sbjct: 62506 aacaaaggccacgctgatcggcctgttagagacaggcagggtgaatgaatgggt 62559 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccggtttcagcagcacagatggtcttgtggt 93 |||||||| || || || |||||||| ||||||| ||| || ||||||||||| || || Sbjct: 61910 agtgaacttccaagtacattcaaagcattccggtatcaacaacacagatggtcctgcgga 61969 Query: 94 ccggcaaacctgttcaggaagatgctgttggagattgtgacaaacaag 141 |||||||||||||||||||| ||| || ||||||||| ||||||||| Sbjct: 61970 ccggcaaacctgttcaggaaaatgttggtggagattgccacaaacaag 62017 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 140 agaaagtgacaatctggaagaaattccatgtcatctacaacttcttcttggtgcgcaaga 199 ||||||||||| | |||||||| || |||| |||||||||||||| ||||||||||||| Sbjct: 62106 agaaagtgacattgtggaagaagatctatgtgatctacaacttctttttggtgcgcaaga 62165 Query: 200 t 200 | Sbjct: 62166 t 62166
>ref|NM_122180.2| Arabidopsis thaliana ATCSLA02; transferase, transferring glycosyl groups AT5G22740 (ATCSLA02) mRNA, complete cds Length = 2263 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 8 tctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagccttccggt 67 |||||||||| || ||||||| || ||||| || || || ||||| | ||||||||| | Sbjct: 1118 tctacctcggtgaccttcaggtgaaaagtgagcttccaagtacttttagagccttccgtt 1177 Query: 68 ttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctgttggaga 127 ||||||| || |||||||||||||| || ||||| || || ||||| ||| | |||||| Sbjct: 1178 ttcagcaacatagatggtcttgtggacctgcaaatctctttaggaaaatggttatggaga 1237 Query: 128 ttgtgacaaacaagaaagtgacaatctggaagaaa 162 | || | |||||||||||||| | ||||||||||| Sbjct: 1238 tcgtaagaaacaagaaagtgagattctggaagaaa 1272
>gb|AY093293.1| Arabidopsis thaliana glucosyltransferase-like protein (MDJ22.16) mRNA, complete cds Length = 1636 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 8 tctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagccttccggt 67 |||||||||| || ||||||| || ||||| || || || ||||| | ||||||||| | Sbjct: 911 tctacctcggtgaccttcaggtgaaaagtgagcttccaagtacttttagagccttccgtt 970 Query: 68 ttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctgttggaga 127 ||||||| || |||||||||||||| || ||||| || || ||||| ||| | |||||| Sbjct: 971 ttcagcaacatagatggtcttgtggacctgcaaatctctttaggaaaatggttatggaga 1030 Query: 128 ttgtgacaaacaagaaagtgacaatctggaagaaa 162 | || | |||||||||||||| | ||||||||||| Sbjct: 1031 tcgtaagaaacaagaaagtgagattctggaagaaa 1065
>gb|AY059852.1| Arabidopsis thaliana glucosyltransferase-like protein (MDJ22.16) mRNA, complete cds Length = 1874 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 8 tctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagccttccggt 67 |||||||||| || ||||||| || ||||| || || || ||||| | ||||||||| | Sbjct: 1111 tctacctcggtgaccttcaggtgaaaagtgagcttccaagtacttttagagccttccgtt 1170 Query: 68 ttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctgttggaga 127 ||||||| || |||||||||||||| || ||||| || || ||||| ||| | |||||| Sbjct: 1171 ttcagcaacatagatggtcttgtggacctgcaaatctctttaggaaaatggttatggaga 1230 Query: 128 ttgtgacaaacaagaaagtgacaatctggaagaaa 162 | || | |||||||||||||| | ||||||||||| Sbjct: 1231 tcgtaagaaacaagaaagtgagattctggaagaaa 1265
>gb|AY058158.1| Arabidopsis thaliana AT5g22740/MDJ22_16 mRNA, complete cds Length = 2167 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 8 tctacctcggcgatgttcaggttaagagtgaactccccagcactttcaaagccttccggt 67 |||||||||| || ||||||| || ||||| || || || ||||| | ||||||||| | Sbjct: 1118 tctacctcggtgaccttcaggtgaaaagtgagcttccaagtacttttagagccttccgtt 1177 Query: 68 ttcagcagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctgttggaga 127 ||||||| || |||||||||||||| || ||||| || || ||||| ||| | |||||| Sbjct: 1178 ttcagcaacatagatggtcttgtggacctgcaaatctctttaggaaaatggttatggaga 1237 Query: 128 ttgtgacaaacaagaaagtgacaatctggaagaaa 162 | || | |||||||||||||| | ||||||||||| Sbjct: 1238 tcgtaagaaacaagaaagtgagattctggaagaaa 1272
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 24 tcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatg 83 ||||||||||||||||||||| || || |||||||||| ||| ||||||||| ||||| Sbjct: 3714200 tcaggttaagagtgaactcccaagtaccttcaaagcctaccgacatcagcagcatagatg 3714259 Query: 84 gtcttgtggtccggcaaacctgttcag 110 | |||||||| | || ||||| ||||| Sbjct: 3714260 gacttgtggtgctgccaacctcttcag 3714286
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 24 tcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatg 83 ||||||||||||||||||||| || || |||||||||| ||| ||||||||| ||||| Sbjct: 67177 tcaggttaagagtgaactcccaagtaccttcaaagcctaccgacatcagcagcatagatg 67118 Query: 84 gtcttgtggtccggcaaacctgttcag 110 | |||||||| | || ||||| ||||| Sbjct: 67117 gacttgtggtgctgccaacctcttcag 67091
>tpg|BK000082.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like A4 gene, complete cds Length = 4946 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 24 tcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatg 83 ||||||||||||||||||||| || || |||||||||| ||| ||||||||| ||||| Sbjct: 3485 tcaggttaagagtgaactcccaagtaccttcaaagcctaccgacatcagcagcatagatg 3544 Query: 84 gtcttgtggtccggcaaacctgttcag 110 | |||||||| | || ||||| ||||| Sbjct: 3545 gacttgtggtgctgccaacctcttcag 3571
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 24 tcaggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatg 83 ||||||||||||||||||||| || || |||||||||| ||| ||||||||| ||||| Sbjct: 3714311 tcaggttaagagtgaactcccaagtaccttcaaagcctaccgacatcagcagcatagatg 3714370 Query: 84 gtcttgtggtccggcaaacctgttcag 110 | |||||||| | || ||||| ||||| Sbjct: 3714371 gacttgtggtgctgccaacctcttcag 3714397
>ref|XM_482559.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1713 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 46 agcactttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctg 105 ||||| ||||| || | |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 1012 agcacattcaaggcataccggtttcagcagcacagatggtcatgtggaccagcaaatctg 1071 Query: 106 ttcaggaagatgctgttggagattgtgacaaacaagaaagtg 147 |||| ||| ||| || | |||||| | ||||||||||||| Sbjct: 1072 ttcaagaaaatgatggtagagattttagaaaacaagaaagtg 1113
>gb|DQ417757.1| Physcomitrella patens cellulose synthase-like A2 (CslA2) mRNA, complete cds Length = 2238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 26 aggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatggt 85 |||| |||| ||| || |||||||||||||| || ||||| || |||||||||||||||| Sbjct: 1353 aggtgaagaatgagctgcccagcactttcaaggcgttccgattccagcagcacagatggt 1412 Query: 86 cttgtggtccggcaaacctgtt 107 | || || ||||| |||||||| Sbjct: 1413 cgtgcgggccggccaacctgtt 1434 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 180 cttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctactgc 234 ||||||||| ||||||||| | || || || |||||||||||||||||||||||| Sbjct: 1507 cttcttcttcgtgcgcaaggttgtggctcatattgtgacattcaccttctactgc 1561 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 361 ttctggatcctcttcgaaaacgtcatgtcgctgca 395 ||||||||||| ||||| ||||| ||||||||||| Sbjct: 1688 ttctggatcctgttcgagaacgtgatgtcgctgca 1722
>gb|DQ417756.1| Physcomitrella patens cellulose synthase-like A1 (CslA1) mRNA, complete cds Length = 2116 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 46 agcactttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctg 105 ||||| ||||| || |||||||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 1283 agcacgttcaaggcgttccggttccagcagcacaggtggtcgtgcgggccggcgaacctg 1342 Query: 106 ttcaggaagatgctgtt 122 ||| ||||| ||||||| Sbjct: 1343 ttccggaaggtgctgtt 1359 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 181 ttcttcttggtgcgcaagatcgtcgcccacattgtgacattcaccttctactgc 234 |||||||| ||||| |||||||| |||||||||||||| || || ||||||||| Sbjct: 1418 ttcttcttcgtgcggaagatcgtggcccacattgtgacgtttacattctactgc 1471
>ref|XM_470299.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 63.9 bits (32), Expect = 7e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 27 ggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatggtc 86 |||||||||||||||||| || || |||||||||| ||| ||||||||| |||||| | Sbjct: 975 ggttaagagtgaactcccaagtaccttcaaagcctaccgacatcagcagcatagatggac 1034 Query: 87 ttgtggtccggcaaacctgttcag 110 ||||||| | || ||||| ||||| Sbjct: 1035 ttgtggtgctgccaacctcttcag 1058
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 46 agcactttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctg 105 ||||| ||||| || | |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 21077796 agcacattcaaggcataccggtttcagcagcacagatggtcatgtggaccagcaaatctg 21077855 Query: 106 ttca 109 |||| Sbjct: 21077856 ttca 21077859
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 46 agcactttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctg 105 ||||| ||||| || | |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 143971 agcacattcaaggcataccggtttcagcagcacagatggtcatgtggaccagcaaatctg 144030 Query: 106 ttca 109 |||| Sbjct: 144031 ttca 144034
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 46 agcactttcaaagccttccggtttcagcagcacagatggtcttgtggtccggcaaacctg 105 ||||| ||||| || | |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 49006 agcacattcaaggcataccggtttcagcagcacagatggtcatgtggaccagcaaatctg 49065 Query: 106 ttca 109 |||| Sbjct: 49066 ttca 49069
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 25 caggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatgg 84 |||||||||||||||||||| || || |||||||||| ||| || |||||| |||||| Sbjct: 16209703 caggttaagagtgaactcccaagtaccttcaaagcctaccgacatcggcagcatagatgg 16209762 Query: 85 tcttgtggtccggcaaacctgttcag 110 |||||||| | || ||||| ||||| Sbjct: 16209763 acttgtggtactgccaacctcttcag 16209788 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 359 tcttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccac 410 ||||||||||||||||||| ||||||||||| |||| | ||||||||||| Sbjct: 22600796 tcttctggatcctcttcgagaacgtcatgtccatgcaccggaccaaggccac 22600847
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 25 caggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatgg 84 |||||||||||||||||||| || || |||||||||| ||| || |||||| |||||| Sbjct: 26219 caggttaagagtgaactcccaagtaccttcaaagcctaccgacatcggcagcatagatgg 26278 Query: 85 tcttgtggtccggcaaacctgttcag 110 |||||||| | || ||||| ||||| Sbjct: 26279 acttgtggtactgccaacctcttcag 26304
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 60.0 bits (30), Expect = 1e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 25 caggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatgg 84 |||||||||||||||||||| || || |||||||||| ||| || |||||| |||||| Sbjct: 114304 caggttaagagtgaactcccaagtaccttcaaagcctaccgacatcggcagcatagatgg 114363 Query: 85 tcttgtggtccggcaaacctgttcag 110 |||||||| | || ||||| ||||| Sbjct: 114364 acttgtggtactgccaacctcttcag 114389
>dbj|AP006450.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1130E07 Length = 152245 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 359 tcttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccac 410 ||||||||||||||||||| ||||||||||| |||| | ||||||||||| Sbjct: 42716 tcttctggatcctcttcgagaacgtcatgtccatgcaccggaccaaggccac 42767
>dbj|AP006162.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1331F11 Length = 132205 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 359 tcttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccac 410 ||||||||||||||||||| ||||||||||| |||| | ||||||||||| Sbjct: 115997 tcttctggatcctcttcgagaacgtcatgtccatgcaccggaccaaggccac 116048
>dbj|AK110960.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A11, full insert sequence Length = 1399 Score = 56.0 bits (28), Expect = 2e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 27 ggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatggtc 86 |||||||||||||||||| || || |||||||||| ||| || |||||| |||||| | Sbjct: 279 ggttaagagtgaactcccaagtaccttcaaagcctaccgacatcggcagcatagatggac 338 Query: 87 ttgtggtccggcaaacctgttcag 110 ||||||| | || ||||| ||||| Sbjct: 339 ttgtggtactgccaacctcttcag 362
>dbj|AK107635.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-E08, full insert sequence Length = 1971 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 359 tcttctggatcctcttcgaaaacgtcatgtcgctgcatagaaccaaggccac 410 ||||||||||||||||||| ||||||||||| |||| | ||||||||||| Sbjct: 1531 tcttctggatcctcttcgagaacgtcatgtccatgcaccggaccaaggccac 1582
>gb|BT009013.1| Triticum aestivum clone wdk3c.pk006.c5:fis, full insert mRNA sequence Length = 1155 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 359 tcttctggatcctcttcgaaaacgtcatgtc 389 ||||||||||||||||||| ||||||||||| Sbjct: 486 tcttctggatcctcttcgagaacgtcatgtc 516 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 448 tgggtcgtcacggagaagctcggc 471 |||||||||||||||||||||||| Sbjct: 575 tgggtcgtcacggagaagctcggc 598
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 25 caggttaagagtgaactccccagcactttcaaagccttccggtttcagcagcacagatgg 84 |||||||||||||||||||| || || ||||| |||| ||| ||| |||||||| ||| Sbjct: 117313 caggttaagagtgaactcccaagtaccttcaaggcctaccgccatcaacagcacaggtgg 117254 Query: 85 tcttgtggtccggcaaacctgttcag 110 |||||||| | || ||||| ||||| Sbjct: 117253 acttgtggtgctgccaacctcttcag 117228
>dbj|AB006699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDJ22 Length = 77363 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 57 agccttccggtttcagcagcacagatggtcttgtggtccggcaaa 101 ||||||||| |||||||| || |||||||||||||| || ||||| Sbjct: 52782 agccttccgttttcagcaacatagatggtcttgtggacctgcaaa 52738
>gb|AC137552.11| Medicago truncatula clone mth2-9k5, complete sequence Length = 122089 Score = 48.1 bits (24), Expect = 0.039 Identities = 45/52 (86%) Strand = Plus / Minus Query: 57 agccttccggtttcagcagcacagatggtcttgtggtccggcaaacctgttc 108 ||||||| | || ||||||||||||||||| |||||||| || || |||||| Sbjct: 23298 agccttcagattccagcagcacagatggtcgtgtggtcctgctaatctgttc 23247
>gb|AY351702.1| Ipomoea trifida glycosyltransferase 10 mRNA, complete cds Length = 2146 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccg 65 ||||||||||| ||||||||||| |||||||| Sbjct: 943 agtgaactcccaagcactttcaaggccttccg 974
>ref|NM_102197.4| Arabidopsis thaliana ATCSLA03; transferase, transferring glycosyl groups AT1G23480 (ATCSLA03) transcript variant AT1G23480.2 mRNA, complete cds Length = 2037 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1235 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1275
>ref|NM_001036007.1| Arabidopsis thaliana ATCSLA03; transferase, transferring glycosyl groups AT1G23480 (ATCSLA03) transcript variant AT1G23480.3 mRNA, complete cds Length = 2146 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1344 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1384
>ref|NM_180621.2| Arabidopsis thaliana ATCSLA03; transferase, transferring glycosyl groups AT1G23480 (ATCSLA03) transcript variant AT1G23480.1 mRNA, complete cds Length = 2015 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1213 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1253
>gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig SR1 Length = 82054 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Minus Query: 317 tcctcaattctgttggaactcccaggtctttccacttgcttttcttctggatcctcttcg 376 ||||||| || || |||||||| ||||| |||||||| | || | ||||||| | |||| Sbjct: 57359 tcctcaactcagtgggaactcctaggtcaatccacttgttgttttactggatcttgttcg 57300 Query: 377 aaaacgtcatgtc 389 | ||||||||||| Sbjct: 57299 agaacgtcatgtc 57287 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 34 agtgaactccccagcactttcaaagccttccg 65 ||||||||||| || |||||||| |||||||| Sbjct: 57725 agtgaactcccaagtactttcaaggccttccg 57694
>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence Length = 176757 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ggtctttccacttgcttttct 361 ||||||||||||||||||||| Sbjct: 168176 ggtctttccacttgcttttct 168156
>gb|AC095022.4| Sus scrofa clone RP44-374C1, complete sequence Length = 61497 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ggtctttccacttgcttttct 361 ||||||||||||||||||||| Sbjct: 10841 ggtctttccacttgcttttct 10821
>gb|AY351701.1| Ipomoea trifida glycosyltransferase 5 mRNA, partial cds Length = 1899 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Plus Query: 317 tcctcaattctgttggaactcccaggtctttccacttgcttttcttctggatcctcttcg 376 ||||||| || || |||||||| ||||| |||||||| | || | ||||||| | |||| Sbjct: 1142 tcctcaactcagtgggaactcctaggtcaatccacttgttgttttactggatcttgttcg 1201 Query: 377 aaaacgtcatgtc 389 | ||||||||||| Sbjct: 1202 agaacgtcatgtc 1214 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccg 65 ||||||||||| || |||||||| |||||||| Sbjct: 859 agtgaactcccaagtactttcaaggccttccg 890
>gb|AY351700.1| Ipomoea trifida glycosyltransferase 1 mRNA, complete cds Length = 1993 Score = 42.1 bits (21), Expect = 2.4 Identities = 60/73 (82%) Strand = Plus / Plus Query: 317 tcctcaattctgttggaactcccaggtctttccacttgcttttcttctggatcctcttcg 376 ||||||| || || |||||||| ||||| |||||||| | || | ||||||| | |||| Sbjct: 1226 tcctcaactcagtgggaactcctaggtcaatccacttgttgttttactggatcttgttcg 1285 Query: 377 aaaacgtcatgtc 389 | ||||||||||| Sbjct: 1286 agaacgtcatgtc 1298 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 34 agtgaactccccagcactttcaaagccttccg 65 ||||||||||| || |||||||| |||||||| Sbjct: 943 agtgaactcccaagtactttcaaggccttccg 974
>gb|AC055753.21| Homo sapiens 3 BAC RP11-503I22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167662 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 632 ttttcttccagtcgatggctt 652 ||||||||||||||||||||| Sbjct: 95665 ttttcttccagtcgatggctt 95685
>gb|BT000203.1| Arabidopsis thaliana unknown protein (At1g23480) mRNA, complete cds Length = 1707 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1024 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1064
>gb|AY099769.1| Arabidopsis thaliana unknown protein (At1g23480) mRNA, complete cds Length = 1927 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1124 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1164
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 tttcaaagccttccggtttcagcag 75 |||||||||||||| |||||||||| Sbjct: 5748604 tttcaaagccttcctgtttcagcag 5748580
>emb|BX815621.1|CNS0ADY9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1925 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1121 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1161
>emb|BX815871.1|CNS0ABW0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1822 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1111 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1151
>emb|BX816185.1|CNS0AAH7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1837 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 1215 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 1255
>gb|AC007945.3|AC007945 Genomic sequence for Arabidopsis thaliana BAC F28C11 from chromosome I, complete sequence Length = 80472 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 39304 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 39344
>gb|U65066.1|TVU65066 Trichomonas vaginalis sarcoplasmic-endoplasmic reticulum calcium ATPase (TVCA1) gene, complete cds Length = 6365 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 tcttctggatcctcttcgaaa 379 ||||||||||||||||||||| Sbjct: 715 tcttctggatcctcttcgaaa 695
>gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5O8 sequence, complete sequence Length = 99923 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 52 ttcaaagccttccggtttcagcagcacagatggtcttgtgg 92 |||||||| | | |||||||||| || |||||||||||||| Sbjct: 9613 ttcaaagcatacaggtttcagcaacatagatggtcttgtgg 9653
>dbj|AP006685.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT45M12, TM0378b, complete sequence Length = 86433 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Plus Query: 73 cagcacagatggtcttgtggtccggcaaacctgttcaggaagatgctgttggagattgtg 132 |||||| | ||||||||||| || || || ||||||| ||| ||| | ||||||||||| Sbjct: 68999 cagcaccgttggtcttgtggaccagccaatctgttcaagaaaatggtcttggagattgta 69058 Query: 133 acaaacaag 141 | ||||||| Sbjct: 69059 agaaacaag 69067
>ref|NM_125215.3| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT5G58300 mRNA, complete cds Length = 2664 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttgtgacaaacaagaaagtgacaa 151 |||||||||||||||||| ||||| Sbjct: 312 ttgtgacaaacaagaaagagacaa 289
>gb|AC102205.8| Mus musculus chromosome 7, clone RP24-194L15, complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tgtgacaaacaagaaagtga 148 |||||||||||||||||||| Sbjct: 118452 tgtgacaaacaagaaagtga 118471
>gb|AC146079.2| Pan troglodytes BAC clone RP43-46C10 from 7, complete sequence Length = 186437 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 tctgttggaactcccaggtc 344 |||||||||||||||||||| Sbjct: 61179 tctgttggaactcccaggtc 61198
>gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome 6, complete sequence Length = 188069 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 ttcctcttctcatgtggatg 590 |||||||||||||||||||| Sbjct: 91106 ttcctcttctcatgtggatg 91087
>gb|AC104231.10| Homo sapiens chromosome 15, clone RP11-96H23, complete sequence Length = 81256 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 acctgttcaggaagatgctg 120 |||||||||||||||||||| Sbjct: 22461 acctgttcaggaagatgctg 22480
>gb|AC004741.2| Homo sapiens PAC clone RP4-754J18 from 7, complete sequence Length = 112242 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 tctgttggaactcccaggtc 344 |||||||||||||||||||| Sbjct: 32729 tctgttggaactcccaggtc 32748
>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5, complete sequence Length = 122069 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 ccttcctcttctcatgtggatggt 592 ||||||||| |||||||||||||| Sbjct: 28600 ccttcctctcctcatgtggatggt 28623
>emb|AL138999.13| Human DNA sequence from clone RP11-141M1 on chromosome 13 Contains parts of 2 novel genes, complete sequence Length = 51831 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 106 ttcaggaagatgctgttggagattgtga 133 |||||| | ||||||||||||||||||| Sbjct: 37084 ttcagggacatgctgttggagattgtga 37111
>ref|XM_781144.1| PREDICTED: Strongylocentrotus purpuratus similar to Conserved oligomeric Golgi complex component 7 (LOC581128), mRNA Length = 2469 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gaagatgctgttggagattg 130 |||||||||||||||||||| Sbjct: 492 gaagatgctgttggagattg 511
>ref|XM_790137.1| PREDICTED: Strongylocentrotus purpuratus similar to Conserved oligomeric Golgi complex component 7 (LOC590536), partial mRNA Length = 369 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gaagatgctgttggagattg 130 |||||||||||||||||||| Sbjct: 201 gaagatgctgttggagattg 220
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gccttccggtttcagcagca 77 |||||||||||||||||||| Sbjct: 4733440 gccttccggtttcagcagca 4733459
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 atcgtcgcccacattgtgac 218 |||||||||||||||||||| Sbjct: 256758 atcgtcgcccacattgtgac 256777
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 atcgtcgcccacattgtgac 218 |||||||||||||||||||| Sbjct: 272176 atcgtcgcccacattgtgac 272157
>emb|AL670322.1|TB13J3 Trypanosoma brucei Bn-2 VSG expression site BAC 13J3 Length = 58506 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tttccacttgcttttcttct 364 |||||||||||||||||||| Sbjct: 30233 tttccacttgcttttcttct 30214
>gb|AC007166.7| Arabidopsis thaliana chromosome 2 clone F14P14 map mi421, complete sequence Length = 92569 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ttttcttctggatcctcttc 375 |||||||||||||||||||| Sbjct: 37009 ttttcttctggatcctcttc 37028
>gb|AY065009.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2373 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttgtgacaaacaagaaagtgacaa 151 |||||||||||||||||| ||||| Sbjct: 312 ttgtgacaaacaagaaagagacaa 289
>gb|AC022820.11| Homo sapiens chromosome 8, clone RP11-46G17, complete sequence Length = 180899 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 gacaatttcttcatatacct 632 |||||||||||||||||||| Sbjct: 159810 gacaatttcttcatatacct 159829
>gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, complete sequence Length = 160454 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 gacaatttcttcatatacct 632 |||||||||||||||||||| Sbjct: 86151 gacaatttcttcatatacct 86132
>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence Length = 152232 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cagcagcacagatggtcttgtggt 93 |||||||||||||||| ||||||| Sbjct: 41070 cagcagcacagatggtgttgtggt 41093
>emb|BX296548.20| Pig DNA sequence from clone PigE-193I9, complete sequence Length = 172252 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 gtcattcatgaggatgtggg 535 |||||||||||||||||||| Sbjct: 150927 gtcattcatgaggatgtggg 150908
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 gaagctcggcagcgccatga 481 |||||||||||||||||||| Sbjct: 2903352 gaagctcggcagcgccatga 2903371
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttgtgacaaacaagaaagtgacaa 151 |||||||||||||||||| ||||| Sbjct: 46051 ttgtgacaaacaagaaagagacaa 46028
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 caaccatcatcaccctcctc 321 |||||||||||||||||||| Sbjct: 407218 caaccatcatcaccctcctc 407237
>emb|AL772410.12| Mouse DNA sequence from clone RP23-402K11 on chromosome 4, complete sequence Length = 140507 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ccatctttgtccctgaggtt 270 |||||||||||||||||||| Sbjct: 60862 ccatctttgtccctgaggtt 60843
>emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chromosome X, complete sequence Length = 197729 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aacaaagcatcagccaggaa 515 |||||||||||||||||||| Sbjct: 84673 aacaaagcatcagccaggaa 84654
>gb|BT001138.1| Arabidopsis thaliana At5g58299/At5g58299 mRNA, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 ttgtgacaaacaagaaagtgacaa 151 |||||||||||||||||| ||||| Sbjct: 103 ttgtgacaaacaagaaagagacaa 80
>gb|AC021573.10| Homo sapiens chromosome 11, clone RP11-411D10, complete sequence Length = 144656 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gagattgtgacaaacaagaaagtg 147 |||||||||||||| ||||||||| Sbjct: 70110 gagattgtgacaaagaagaaagtg 70087 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,130,553 Number of Sequences: 3902068 Number of extensions: 7130553 Number of successful extensions: 125068 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 124521 Number of HSP's gapped (non-prelim): 538 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
