ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22c18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550032.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1980 Score = 607 bits (306), Expect = e-170 Identities = 489/550 (88%) Strand = Plus / Plus Query: 22 cttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcatt 81 ||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1060 cttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcatt 1119 Query: 82 gcatctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgatt 141 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 1120 gcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttggtacaatgatt 1179 Query: 142 gcatcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttttctgga 201 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1180 gcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttttctggc 1239 Query: 202 atggcggcgtcgatgttactcttgtcattgtccttcacctggaaggctttggcaccttat 261 ||||| || || |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 1240 atggctgcctcaatgttacttctatcattgtccttcacgtggaaggctttggcaccttat 1299 Query: 262 tctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttggagct 321 || ||| ||||||| |||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 1300 tcaggccctcttgctgttgctggcactgttttgtatgtgctgtcttttgctcttggagct 1359 Query: 322 ggccctgttccagctttgctccttcctgaaatatttgcctccagaataagggccaaggct 381 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1360 ggcccagttccagcattgctccttcctgaaatatttgcctccagaataagggctaaagct 1419 Query: 382 gttgcattatcactgggcatgcactgggtatccaacttcttcatcggactgtacttcctg 441 ||||||||||| ||||||||||||||||| || |||||||| || || || |||||| || Sbjct: 1420 gttgcattatctctgggcatgcactgggtttcgaacttctttattggcctctacttcttg 1479 Query: 442 agcgtcgtcaacaagtttgggatcagcaccgtgtacttgggtttcgcgtccgtgtgcgct 501 |||||||||||||| || || |||||||| ||||| ||||| || || || || |||||| Sbjct: 1480 agcgtcgtcaacaaattcggaatcagcactgtgtatttgggatttgcatctgtttgcgct 1539 Query: 502 ctcgcggtcctgtacatagccggcaatgtggtcgagaccaaggggcgatccctagaagag 561 || || || | |||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 1540 cttgctgttgtctacatagctggaaatgtggttgagaccaaggggcgttctctggaagag 1599 Query: 562 atcgagcggg 571 || ||||||| Sbjct: 1600 attgagcggg 1609
>dbj|AK065247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J01, full insert sequence Length = 1982 Score = 607 bits (306), Expect = e-170 Identities = 489/550 (88%) Strand = Plus / Plus Query: 22 cttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcatt 81 ||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1060 cttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcatt 1119 Query: 82 gcatctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgatt 141 ||||||||||||||||||||||| |||||||| || |||||||||||||| || |||||| Sbjct: 1120 gcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttggtacaatgatt 1179 Query: 142 gcatcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttttctgga 201 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1180 gcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttttctggc 1239 Query: 202 atggcggcgtcgatgttactcttgtcattgtccttcacctggaaggctttggcaccttat 261 ||||| || || |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 1240 atggctgcctcaatgttacttctatcattgtccttcacgtggaaggctttggcaccttat 1299 Query: 262 tctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttggagct 321 || ||| ||||||| |||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 1300 tcaggccctcttgctgttgctggcactgttttgtatgtgctgtcttttgctcttggagct 1359 Query: 322 ggccctgttccagctttgctccttcctgaaatatttgcctccagaataagggccaaggct 381 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1360 ggcccagttccagcattgctccttcctgaaatatttgcctccagaataagggctaaagct 1419 Query: 382 gttgcattatcactgggcatgcactgggtatccaacttcttcatcggactgtacttcctg 441 ||||||||||| ||||||||||||||||| || |||||||| || || || |||||| || Sbjct: 1420 gttgcattatctctgggcatgcactgggtttcgaacttctttattggcctctacttcttg 1479 Query: 442 agcgtcgtcaacaagtttgggatcagcaccgtgtacttgggtttcgcgtccgtgtgcgct 501 |||||||||||||| || || |||||||| ||||| ||||| || || || || |||||| Sbjct: 1480 agcgtcgtcaacaaattcggaatcagcactgtgtatttgggatttgcatctgtttgcgct 1539 Query: 502 ctcgcggtcctgtacatagccggcaatgtggtcgagaccaaggggcgatccctagaagag 561 || || || | |||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 1540 cttgctgttgtctacatagctggaaatgtggttgagaccaaggggcgttctctggaagag 1599 Query: 562 atcgagcggg 571 || ||||||| Sbjct: 1600 attgagcggg 1609
>gb|BT018814.1| Zea mays clone EL01N0531A02.d mRNA sequence Length = 2008 Score = 545 bits (275), Expect = e-152 Identities = 492/563 (87%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 2 gcactgtttttgttc-agcaacttgctggcataaatgctgttgtgtactactctacatct 60 ||||||||||||||| |||| |||||||| ||||| |||||||| || ||||||||||| Sbjct: 1158 gcactgtttttgttccagcagcttgctggtataaacgctgttgtatattactctacatcg 1217 Query: 61 gtgttccgcagtgcaggcattgcatctgatgttgcagcgagtgctcttgttggtgctgcc 120 |||||||| |||||||||||||||||||||||||| || |||||||||||||| || ||| Sbjct: 1218 gtgttccgtagtgcaggcattgcatctgatgttgctgctagtgctcttgttggagcagcc 1277 Query: 121 aatgtttttggcaccatgattgcatcttcactgatggacaagcaaggaaggaagagcctt 180 ||||||||||| || ||| |||||||||| || |||||||| ||||||||||| |||||| Sbjct: 1278 aatgtttttggtactatggttgcatcttctctaatggacaaacaaggaaggaaaagcctt 1337 Query: 181 ctcataacaagcttttctggaatggcggcgtcgatgttactcttgtcattgtccttcacc 240 || |||||||||||||||||||||| || || ||| ||||| | |||||||||||||| Sbjct: 1338 ctgataacaagcttttctggaatgggtgcttcaatgctactcctagcattgtccttcacc 1397 Query: 241 tggaaggctttggcaccttattctggcactcttgccgttgttggcactgtcctgtatgtg 300 ||||| ||| |||||||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 1398 tggaaagctctggcaccttattctggtactcttgctgttgttggcactgttctgtacgtg 1457 Query: 301 ctgtctttcgctcttggagctggccctgttccagctttgctccttcctgaaatatttgcc 360 ||||| || ||||| ||||| |||||||||||||| | || |||||||||||||||||| Sbjct: 1458 ctgtcatttgctctaggagcgggccctgttccagcgctacttcttcctgaaatatttgcc 1517 Query: 361 tccagaataagggccaaggctgttgcattatcactgggcatgcactgggtatccaacttc 420 || |||||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 1518 tcgagaataagggccaaggctgtcgcattatctctaggcatgcactgggtatctaacttt 1577 Query: 421 ttcatcggactgtacttcctgagcgtcgtcaacaagtttgggatcagcaccgtgtacttg 480 ||||| || |||||||||||||| ||||| | ||||||||||||||||| |||||| || Sbjct: 1578 ttcattggcctgtacttcctgagtgtcgtgagcaagtttgggatcagcaacgtgtatctg 1637 Query: 481 ggtttcgcgtccgtgtgcgctctcgcggtcctgtacatagccggcaatgtggtcgagacc 540 || || || || || || || || || || ||||||||||| || |||||||||||| || Sbjct: 1638 ggatttgcatcagtatgtgcccttgcagttctgtacatagctgggaatgtggtcgagccc 1697 Query: 541 aaggggcgatccctagaagagat 563 |||||| ||||||| |||||||| Sbjct: 1698 aaggggagatcccttgaagagat 1720
>gb|AF215854.1|AF215854 Zea mays hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1874 Score = 545 bits (275), Expect = e-152 Identities = 492/563 (87%), Gaps = 1/563 (0%) Strand = Plus / Plus Query: 2 gcactgtttttgttc-agcaacttgctggcataaatgctgttgtgtactactctacatct 60 ||||||||||||||| |||| |||||||| ||||| |||||||| || ||||||||||| Sbjct: 1040 gcactgtttttgttccagcagcttgctggtataaacgctgttgtatattactctacatcg 1099 Query: 61 gtgttccgcagtgcaggcattgcatctgatgttgcagcgagtgctcttgttggtgctgcc 120 |||||||| |||||||||||||||||||||||||| || |||||||||||||| || ||| Sbjct: 1100 gtgttccgtagtgcaggcattgcatctgatgttgctgctagtgctcttgttggagcagcc 1159 Query: 121 aatgtttttggcaccatgattgcatcttcactgatggacaagcaaggaaggaagagcctt 180 ||||||||||| || ||| |||||||||| || |||||||| ||||||||||| |||||| Sbjct: 1160 aatgtttttggtactatggttgcatcttctctaatggacaaacaaggaaggaaaagcctt 1219 Query: 181 ctcataacaagcttttctggaatggcggcgtcgatgttactcttgtcattgtccttcacc 240 || |||||||||||||||||||||| || || ||| ||||| | |||||||||||||| Sbjct: 1220 ctgataacaagcttttctggaatgggtgcttcaatgctactcctagcattgtccttcacc 1279 Query: 241 tggaaggctttggcaccttattctggcactcttgccgttgttggcactgtcctgtatgtg 300 ||||| ||| |||||||||||||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 1280 tggaaagctctggcaccttattctggtactcttgctgttgttggcactgttctgtacgtg 1339 Query: 301 ctgtctttcgctcttggagctggccctgttccagctttgctccttcctgaaatatttgcc 360 ||||| || ||||| ||||| |||||||||||||| | || |||||||||||||||||| Sbjct: 1340 ctgtcatttgctctaggagcgggccctgttccagcgctacttcttcctgaaatatttgcc 1399 Query: 361 tccagaataagggccaaggctgttgcattatcactgggcatgcactgggtatccaacttc 420 || |||||||||||||||||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 1400 tcgagaataagggccaaggctgtcgcattatctctaggcatgcactgggtatctaacttt 1459 Query: 421 ttcatcggactgtacttcctgagcgtcgtcaacaagtttgggatcagcaccgtgtacttg 480 ||||| || |||||||||||||| ||||| | ||||||||||||||||| |||||| || Sbjct: 1460 ttcattggcctgtacttcctgagtgtcgtgagcaagtttgggatcagcaacgtgtatctg 1519 Query: 481 ggtttcgcgtccgtgtgcgctctcgcggtcctgtacatagccggcaatgtggtcgagacc 540 || || || || || || || || || || ||||||||||| || ||||||||||||||| Sbjct: 1520 ggatttgcatcagtatgtgcccttgcagttctgtacatagctgggaatgtggtcgagacc 1579 Query: 541 aaggggcgatccctagaagagat 563 |||||| |||| || |||||||| Sbjct: 1580 aaggggagatcacttgaagagat 1602
>gb|AY112449.1| Zea mays CL1214_1 mRNA sequence Length = 1905 Score = 331 bits (167), Expect = 2e-87 Identities = 330/386 (85%) Strand = Plus / Plus Query: 178 cttctcataacaagcttttctggaatggcggcgtcgatgttactcttgtcattgtccttc 237 ||||| |||||||||||||||||||||| || || ||| ||||| | ||||||||||| Sbjct: 1217 cttctgataacaagcttttctggaatgggtgcttcaatgctactcctagcattgtccttc 1276 Query: 238 acctggaaggctttggcaccttattctggcactcttgccgttgttggcactgtcctgtat 297 |||||||| ||| |||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 1277 acctggaaagctctggcaccttattctggtactcttgctgttgttggcactgttctgtac 1336 Query: 298 gtgctgtctttcgctcttggagctggccctgttccagctttgctccttcctgaaatattt 357 |||||||| || ||||| ||||| |||||||||||||| | || ||||||||||||||| Sbjct: 1337 gtgctgtcatttgctctaggagcgggccctgttccagcgctacttcttcctgaaatattt 1396 Query: 358 gcctccagaataagggccaaggctgttgcattatcactgggcatgcactgggtatccaac 417 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| ||| Sbjct: 1397 gcctcgagaataagggccaaggctgtcgcattatctctaggcatgcactgggtatctaac 1456 Query: 418 ttcttcatcggactgtacttcctgagcgtcgtcaacaagtttgggatcagcaccgtgtac 477 ||| || |||||||||||||| ||||| | ||||||||||||||||| |||||| Sbjct: 1457 nnnnncattggcctgtacttcctgagtgtcgtgagcaagtttgggatcagcaacgtgtat 1516 Query: 478 ttgggtttcgcgtccgtgtgcgctctcgcggtcctgtacatagccggcaatgtggtcgag 537 |||| || || || || || || || || || ||||||||||| || |||||||||||| Sbjct: 1517 ctgggatttgcatcagtatgtgcccttgcagttctgtacatagctgggaatgtggtcgag 1576 Query: 538 accaaggggcgatccctagaagagat 563 ||||||||| |||| || |||||||| Sbjct: 1577 accaaggggagatcacttgaagagat 1602 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Plus Query: 16 cagcaacttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgca 75 ||||| |||||||| ||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct: 1055 cagcagcttgctggtataaacgctgttgtatattactctacatcggtgttccgtagtgca 1114 Query: 76 ggcattgcatctgatgttgcagcgagtgctcttgttggtgctgccaatg 124 |||||||||||||||||||| || |||||||||||||| || ||||||| Sbjct: 1115 ggcattgcatctgatgttgctgctagtgctcttgttggagcagccaatg 1163
>gb|AY608701.1| Vitis vinifera plastid hexose transporter mRNA, complete cds; nuclear gene for plastid product Length = 2044 Score = 228 bits (115), Expect = 2e-56 Identities = 370/455 (81%) Strand = Plus / Plus Query: 28 ggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatct 87 |||||||||||||| |||||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 1129 ggcataaatgctgtggtgtactattcaacatctgtgttccgcagtgctggaattgcttct 1188 Query: 88 gatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattgcatct 147 ||||||||||| |||||||||||||| || | ||||| |||||||| || ||||| Sbjct: 1189 gatgttgcagccagtgctcttgttggggcatcaaatgtctttggcacagccatagcatcc 1248 Query: 148 tcactgatggacaagcaaggaaggaagagccttctcataacaagcttttctggaatggcg 207 || ||||||||| |||||||||||| || ||||| |||||||||||| |||| ||||| Sbjct: 1249 tctttgatggacaggcaaggaaggaaaagtcttctaataacaagctttgctgggatggct 1308 Query: 208 gcgtcgatgttactcttgtcattgtccttcacctggaaggctttggcaccttattctggc 267 || || ||| | || | || || || ||||| |||| || ||||||| || |||||| Sbjct: 1309 gcttcaatgatgctgctttccttctctttcacttggagtgccctggcaccatactctggc 1368 Query: 268 actcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttggagctggccct 327 || ||||| || |||||||||| || |||||| |||| ||| ||||||| ||||| ||| Sbjct: 1369 acccttgctgtacttggcactgttctctatgtgttgtccttctctcttggtgctggtcct 1428 Query: 328 gttccagctttgctccttcctgaaatatttgcctccagaataagggccaaggctgttgca 387 || || ||| | || ||||| |||||||||||||| ||||| ||||| || || ||||| Sbjct: 1429 gtccctgctcttcttcttccagaaatatttgcctctagaatcagggcaaaagcagttgct 1488 Query: 388 ttatcactgggcatgcactgggtatccaacttcttcatcggactgtacttcctgagcgtc 447 |||||| | |||||||| ||| | || ||||| | || || || |||||| ||||||| Sbjct: 1489 ttatcattaggcatgcattggatctcaaactttgtgattgggctttacttcttgagcgtt 1548 Query: 448 gtcaacaagtttgggatcagcaccgtgtacttggg 482 || |||||||| ||||||||||| || |||||||| Sbjct: 1549 gtaaacaagttcgggatcagcacagtttacttggg 1583
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 294 gtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcctgaaat 353 ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 1847161 gtatgtgctgtcttttgctcttggagctggcccagttccagcattgctccttcctgaaat 1847220 Query: 354 atttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgggta 411 ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 1847221 atttgcctccagaataagggctaaagctgttgcattatctctgggcatgcactgggta 1847278 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 22 cttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcatt 81 ||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 1846635 cttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcatt 1846694 Query: 82 gcatctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttgg 131 ||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 1846695 gcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttgg 1846744 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 136 atgattgcatcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttt 195 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1846824 atgattgcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttt 1846883 Query: 196 tctggaatgg 205 ||||| |||| Sbjct: 1846884 tctggcatgg 1846893 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 415 aacttcttcatcggactgtacttcctgagcgtcgtcaacaagtttgggatcagcaccgtg 474 |||||||| || || || |||||| |||||||||||||||| || || |||||||| ||| Sbjct: 1847575 aacttctttattggcctctacttcttgagcgtcgtcaacaaattcggaatcagcactgtg 1847634 Query: 475 tacttgggtttcgcgtccgtgtgcgctctcgcggtcctgtacatagccggcaatgtggtc 534 || ||||| || || || || |||||||| || || | |||||||| || |||||||| Sbjct: 1847635 tatttgggatttgcatctgtttgcgctcttgctgttgtctacatagctggaaatgtggtt 1847694 Query: 535 gagaccaaggggcgatccctagaagagatcgagcggg 571 |||||||||||||| || || |||||||| ||||||| Sbjct: 1847695 gagaccaaggggcgttctctggaagagattgagcggg 1847731 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 226 tcattgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggc 285 |||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||| Sbjct: 1847006 tcattgtccttcacgtggaaggctttggcaccttattcaggccctcttgctgttgctggc 1847065 Query: 286 actgt 290 ||||| Sbjct: 1847066 actgt 1847070
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 186 bits (94), Expect = 6e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 294 gtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcctgaaat 353 ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 88543 gtatgtgctgtcttttgctcttggagctggcccagttccagcattgctccttcctgaaat 88602 Query: 354 atttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgggta 411 ||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 88603 atttgcctccagaataagggctaaagctgttgcattatctctgggcatgcactgggta 88660 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 22 cttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcatt 81 ||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 88017 cttgccggtataaatgctgttgtatattactctacatcggtgttccgcagtgcaggcatt 88076 Query: 82 gcatctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttgg 131 ||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 88077 gcatctgatgttgcagcgagtgcccttgttggagcagccaatgtttttgg 88126 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 136 atgattgcatcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttt 195 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 88206 atgattgcatcttctctgatggacaagcaaggaaggaagagccttctgataacaagcttt 88265 Query: 196 tctggaatgg 205 ||||| |||| Sbjct: 88266 tctggcatgg 88275 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 415 aacttcttcatcggactgtacttcctgagcgtcgtcaacaagtttgggatcagcaccgtg 474 |||||||| || || || |||||| |||||||||||||||| || || |||||||| ||| Sbjct: 88957 aacttctttattggcctctacttcttgagcgtcgtcaacaaattcggaatcagcactgtg 89016 Query: 475 tacttgggtttcgcgtccgtgtgcgctctcgcggtcctgtacatagccggcaatgtggtc 534 || ||||| || || || || |||||||| || || | |||||||| || |||||||| Sbjct: 89017 tatttgggatttgcatctgtttgcgctcttgctgttgtctacatagctggaaatgtggtt 89076 Query: 535 gagaccaaggggcgatccctagaagagatcgagcggg 571 |||||||||||||| || || |||||||| ||||||| Sbjct: 89077 gagaccaaggggcgttctctggaagagattgagcggg 89113 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 226 tcattgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggc 285 |||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||| Sbjct: 88388 tcattgtccttcacgtggaaggctttggcaccttattcaggccctcttgctgttgctggc 88447 Query: 286 actgt 290 ||||| Sbjct: 88448 actgt 88452
>gb|AY036055.1| Olea europaea hexose transporter pGlT mRNA, complete cds; nuclear gene for plastid product Length = 2039 Score = 141 bits (71), Expect = 3e-30 Identities = 341/431 (79%) Strand = Plus / Plus Query: 16 cagcaacttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgca 75 ||||| |||||||| |||||||| || || ||||| ||||| ||||| ||||||||||| Sbjct: 1192 cagcagcttgctgggataaatgccgtagtatactattctacttctgttttccgcagtgct 1251 Query: 76 ggcattgcatctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcacc 135 || ||| ||||||||||||| || |||||||| ||||| || || ||||||||||| || Sbjct: 1252 ggaattacatctgatgttgctgccagtgctctagttggggcggcaaatgtttttgggaca 1311 Query: 136 atgattgcatcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttt 195 | ||||| || || ||||||| |||||||||||||| || ||||| | ||||||||| Sbjct: 1312 accattgcgtcctccttgatggataagcaaggaaggaaaagtcttctgcttacaagcttt 1371 Query: 196 tctggaatggcggcgtcgatgttactcttgtcattgtccttcacctggaaggctttggca 255 |||| ||||| | || ||||| || | || || ||||||| |||||| || ||||| Sbjct: 1372 gctggcatggctgtttccatgttgctgctttccttaaccttcacttggaagactctggca 1431 Query: 256 ccttattctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctctt 315 || ||| | ||||| ||||| ||| |||||||||| || ||||| | || ||| ||||| Sbjct: 1432 ccatatgcaggcacccttgctgttcttggcactgttctttatgtattatccttctctctt 1491 Query: 316 ggagctggccctgttccagctttgctccttcctgaaatatttgcctccagaataagggcc 375 || ||||| ||||| || ||| | || ||||| || || |||||||| ||||| || || Sbjct: 1492 ggtgctggtcctgtgcctgctcttctgcttccagagatttttgcctctagaattagagca 1551 Query: 376 aaggctgttgcattatcactgggcatgcactgggtatccaacttcttcatcggactgtac 435 || || || ||||| || | |||||||| ||| |||| || || |||| || |||||| Sbjct: 1552 aaagcagtggcattgtctttaggcatgcattggatatcgaattttgtcattggcctgtac 1611 Query: 436 ttcctgagcgt 446 ||| ||||||| Sbjct: 1612 ttcttgagcgt 1622
>gb|AF215852.1|AF215852 Nicotiana tabacum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1795 Score = 131 bits (66), Expect = 3e-27 Identities = 333/422 (78%) Strand = Plus / Plus Query: 23 ttgctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattg 82 ||||||| ||||||||||| || || || || || | |||||||| ||||| || ||| Sbjct: 1038 ttgctgggataaatgctgtggtctattattccactgcagtgttccgaagtgctggaattt 1097 Query: 83 catctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattg 142 |||||||||| ||||| |||||||| ||||| || ||||| || ||||| || ||| | | Sbjct: 1098 catctgatgtagcagccagtgctctggttggagcagccaacgtctttgggacaatggtgg 1157 Query: 143 catcttcactgatggacaagcaaggaaggaagagccttctcataacaagcttttctggaa 202 |||| || |||||||||| |||||||| ||||| || | | ||||||| |||||| Sbjct: 1158 catcctctttgatggacaaacaaggaagaaagagtctgttgctcgtaagctttactggaa 1217 Query: 203 tggcggcgtcgatgttactcttgtcattgtccttcacctggaaggctttggcaccttatt 262 |||| || || ||| | | | || ||||||||||| ||||||| || |||| |||| Sbjct: 1218 tggctgcatcaatgatgttgctttccttgtccttcacttggaaggtcctgacaccatatt 1277 Query: 263 ctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttggagctg 322 ||||||| || || ||| |||| |||||||| || ||| |||| ||| | ||||| |||| Sbjct: 1278 ctggcacactagctgttcttggtactgtcctctacgtgttgtccttctcacttggtgctg 1337 Query: 323 gccctgttccagctttgctccttcctgaaatatttgcctccagaataagggccaaggctg 382 | |||||||| ||| | || |||||||| ||||||||||||||||| ||||| || || | Sbjct: 1338 gtcctgttcctgctcttctacttcctgagatatttgcctccagaattagggcaaaagcgg 1397 Query: 383 ttgcattatcactgggcatgcactgggtatccaacttcttcatcggactgtacttcctga 442 | || || || |||| ||||| ||| |||| |||||||| || || ||||||||| ||| Sbjct: 1398 tggctttgtctttggggatgcattggatatcaaacttctttattggcctgtacttcttga 1457 Query: 443 gc 444 || Sbjct: 1458 gc 1459
>gb|AF215851.1|AF215851 Spinacia oleracea hexose transporter mRNA, complete cds; nuclear gene for chloroplast product Length = 1864 Score = 105 bits (53), Expect = 2e-19 Identities = 206/257 (80%) Strand = Plus / Plus Query: 34 aatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgatgtt 93 ||||||||||| || ||||| |||||||| ||||| ||||| || |||||||| |||||| Sbjct: 1159 aatgctgttgtatattactccacatctgtattccgaagtgctggaattgcatcagatgtt 1218 Query: 94 gcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattgcatcttcactg 153 || || ||||| |||||||| || | |||||| ||||||| | || ||||| | Sbjct: 1219 gccgctagtgcccttgttggagcatcaaatgttattggcactgctgtcgcctcttcttta 1278 Query: 154 atggacaagcaaggaaggaagagccttctcataacaagcttttctggaatggcggcgtcg 213 ||||||||||||||||| |||||||| || || ||||| || || |||||||| || || Sbjct: 1279 atggacaagcaaggaagaaagagcctactgatgacaagtttctcaggaatggctgcctca 1338 Query: 214 atgttactcttgtcattgtccttcacctggaaggctttggcaccttattctggcactctt 273 ||||| | ||||| | || ||||| ||||||||| | |||||||| || ||||| ||| Sbjct: 1339 atgttgttgctgtcactatcgttcacatggaaggctctagcaccttactcgggcacactt 1398 Query: 274 gccgttgttggcactgt 290 |||||||| || ||||| Sbjct: 1399 gccgttgtgggaactgt 1415
>gb|AF000952.1|AF000952 Prunus armeniaca putative sugar transporter mRNA, complete cds Length = 2065 Score = 99.6 bits (50), Expect = 1e-17 Identities = 341/438 (77%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| ||||| || || || ||||| ||||| ||||||||||| |||||| |||||||| Sbjct: 1230 ataaacgctgtggtctattattctacttctgtcttccgcagtgctggcattacatctgat 1289 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattgcatcttca 150 |||||||| |||||||||||||| || || ||||| || || || | ||||| ||| Sbjct: 1290 gttgcagcaagtgctcttgttggagcagcaaatgtcttcggaactgctgtcgcatcctca 1349 Query: 151 ctgatggacaagcaaggaaggaagagccttctcataacaagcttttctggaatggcggcg 210 ||||||||| ||||||||| | || ||||| | | |||||| ||||||||| || Sbjct: 1350 ttgatggacagacaaggaagggaaagtcttctactcataagcttcggtggaatggctgct 1409 Query: 211 tcgatgttactcttgtcattgtccttcacctggaaggctttggcaccttattctggcact 270 || ||||| || | || |||||||| || ||||| | |||| || ||||||||| | Sbjct: 1410 tcaatgttgctgctttctttgtcctttacatggaaagtcctggctccatattctggcccc 1469 Query: 271 cttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttggagctggccctgtt 330 ||||| |||| ||| ||||| || ||||| ||||| || | ||||| ||||||||||| Sbjct: 1470 cttgctgttgctgggactgttctctatgtactgtccttttcacttggggctggccctgtg 1529 Query: 331 ccagctttgctccttcctgaaatatttgcctccagaataagggccaaggctgttgcatta 390 || ||| | || ||||| || |||||||| || ||||| || || || || ||| | || Sbjct: 1530 cctgctctccttcttccagagatatttgcttcaagaatcagagcaaaagcagtttctttg 1589 Query: 391 tcactgggcatgcactgggtatccaacttcttcatcggactgtacttcctgagcgtcgtc 450 ||| |||||||||||||| | || |||||| |||| || || || ||| ||||| | || Sbjct: 1590 tcattgggcatgcactggatttcaaacttcgtcataggcctctatttcttgagctttgta 1649 Query: 451 aacaagtttgggatcagc 468 | |||||| ||||||||| Sbjct: 1650 accaagttcgggatcagc 1667
>gb|BT012878.1| Lycopersicon esculentum clone 113977R, mRNA sequence Length = 2099 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 25 gctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgca 84 ||||| |||||||||||||| || || || || | |||||||| ||||| || ||| || Sbjct: 1237 gctgggataaatgctgttgtctattattccactgccgtgttccgaagtgctggaattaca 1296 Query: 85 tctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattgca 144 |||||||| ||||| |||||||| ||||| || ||||| || ||||| || | | | ||| Sbjct: 1297 tctgatgtagcagccagtgctctggttggagcagccaacgtctttgggacaacggtggca 1356 Query: 145 tcttcactgatggacaagcaaggaaggaagag 176 || || |||||||||| |||||||||||||| Sbjct: 1357 tcctctttgatggacaaacaaggaaggaagag 1388 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 259 tattctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttgga 318 ||||||||||| || || ||| |||| |||||||| |||||| |||| || | ||||| Sbjct: 1471 tattctggcacactggctgttcttggtactgtcctctatgtgttgtccttttcacttggt 1530 Query: 319 gctggccctgttccagctttgctccttcctgaaatatttgcctccagaataagggc 374 ||||| ||||| || ||| | || ||||| ||||||||||| |||||||| ||||| Sbjct: 1531 gctggtcctgtgcctgctcttctacttccagaaatatttgcttccagaattagggc 1586
>gb|AF215853.1|AF215853 Solanum tuberosum hexose transporter (pGlcT) mRNA, partial cds; nuclear gene for chloroplast product Length = 1650 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Plus Query: 25 gctggcataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgca 84 ||||| |||||||||||||| || || || || | |||||||| ||||| || ||| || Sbjct: 849 gctgggataaatgctgttgtctattattccactgccgtgttccggagtgctggaattaca 908 Query: 85 tctgatgttgcagcgagtgctcttgttggtgctgccaatgtttttggcaccatgattgca 144 |||||||| ||||| |||||||| ||||| || ||||| || ||||| || | | | ||| Sbjct: 909 tctgatgtagcagccagtgctctggttggagcagccaacgtctttgggacaacggtggca 968 Query: 145 tcttcactgatggacaagcaaggaaggaagag 176 || || |||||||||| |||||||||||||| Sbjct: 969 tcctctttgatggacaaacaaggaaggaagag 1000 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 259 tattctggcactcttgccgttgttggcactgtcctgtatgtgctgtctttcgctcttgga 318 ||||||||||| || || ||| |||| |||||||| |||||| |||| || | ||||| Sbjct: 1083 tattctggcacactggctgttcttggtactgtcctctatgtgttgtccttttcacttggt 1142 Query: 319 gctggccctgttccagctttgctccttcctgaaatatttgcctccagaataagggc 374 ||||| ||||| || ||| | || ||||| ||||||||||| |||||||| ||||| Sbjct: 1143 gctggtcctgtgcctgctcttctacttccagaaatatttgcttccagaattagggc 1198
>ref|NM_203058.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.3 mRNA, complete cds Length = 1995 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1496 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1555 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1556 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1615 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1616 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1675 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1676 atatcaaactttgtgatcggactatacttc 1705 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1298 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1357 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1358 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1401
>ref|NM_180497.1| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.2 mRNA, complete cds Length = 1864 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1365 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1424 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1425 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1484 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1485 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1544 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1545 atatcaaactttgtgatcggactatacttc 1574 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1167 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1226 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1227 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1270
>ref|NM_121620.2| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT5G16150 transcript variant AT5G16150.1 mRNA, complete cds Length = 1880 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1381 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1440 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1441 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1500 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1501 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1560 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1561 atatcaaactttgtgatcggactatacttc 1590 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1183 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1242 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1243 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1286
>gb|AY117359.1| Arabidopsis thaliana putative sugar transporter (At5g16150) mRNA, complete cds Length = 1672 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1279 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1338 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1339 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1398 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1399 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1458 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1459 atatcaaactttgtgatcggactatacttc 1488 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1081 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1140 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1141 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1184
>gb|AY091052.1| Arabidopsis thaliana putative sugar transporter (At5g16150) mRNA, complete cds Length = 1876 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1365 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1424 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1425 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1484 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1485 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1544 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1545 atatcaaactttgtgatcggactatacttc 1574 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1167 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1226 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1227 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1270
>gb|AY058152.1| Arabidopsis thaliana AT5g16150/T21H19_70 mRNA, complete cds Length = 1877 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1381 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1440 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1441 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1500 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1501 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1560 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1561 atatcaaactttgtgatcggactatacttc 1590 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1183 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1242 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1243 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1286
>emb|BX830471.1|CNS09YQR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 75.8 bits (38), Expect = 2e-10 Identities = 167/210 (79%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 1500 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 1559 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccctgttccagctttgctccttcct 348 || || ||||| ||||| ||| | ||||| |||||||| || || ||| | || ||||| Sbjct: 1560 gttctatatgtcctgtcattctcacttggtgctggcccggtaccggctcttcttcttcca 1619 Query: 349 gaaatatttgcctccagaataagggccaaggctgttgcattatcactgggcatgcactgg 408 || |||||||| ||| |||| || || || || || || | || || |||||||||||| Sbjct: 1620 gagatatttgcatcccgaatcagagcaaaagccgtcgctctttctctcggcatgcactgg 1679 Query: 409 gtatccaacttcttcatcggactgtacttc 438 |||| ||||| | |||||||| |||||| Sbjct: 1680 atatcaaactttgtgatcggactatacttc 1709 Score = 48.1 bits (24), Expect = 0.037 Identities = 84/104 (80%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1302 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1361 Query: 91 gttgcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 |||||||| |||||||| ||||| || | ||||| |||||||| Sbjct: 1362 gttgcagccagtgctctcgttggagcatcaaatgtctttggcac 1405
>gb|AF286906.1|AF286906 Mesembryanthemum crystallinum putative glucose translocator mRNA, complete cds; nuclear gene for chloroplast product Length = 2041 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 34 aatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgatgtt 93 |||||||| || || ||||| || ||||| ||||||||||| || |||| |||||||||| Sbjct: 1228 aatgctgtggtatattactccacttctgtattccgcagtgctggaattgaatctgatgtt 1287 Query: 94 gcagcgagtgctcttgttggtgctgccaatgtttttggcac 134 ||||| |||||| | ||||| ||||| ||||| || ||||| Sbjct: 1288 gcagctagtgctttggttggggctgcaaatgtcttcggcac 1328 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 cttcctgaaatatttgcctccagaat 368 ||||||||||| |||||||||||||| Sbjct: 1537 cttcctgaaatttttgcctccagaat 1562
>gb|AY184480.1| Brassica rapa subsp. pekinensis putative sugar transporter mRNA, partial cds Length = 513 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | ||||||||||||||||| |||||||| ||| Sbjct: 156 ttgtccttcacatggaaggctcttgctgcatattctggcactcttgctgttgttggaact 215 Query: 289 gtcctgtatgtgctgtctttcgctcttggagctggccc 326 || || ||||| ||||| || | ||||| |||||||| Sbjct: 216 gttctatatgtcctgtcattttcgcttggtgctggccc 253 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 84 atctgatgttgcagcgagtgctcttgttgg 113 ||||||||||||||| |||||||||||||| Sbjct: 11 atctgatgttgcagccagtgctcttgttgg 40
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 19167 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 19226 Query: 289 gtcctgta 296 || ||||| Sbjct: 19227 gttctgta 19234 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 18790 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 18849 Query: 91 gttgcagcgagtgctcttgttgg 113 |||||||| |||||||| ||||| Sbjct: 18850 gttgcagccagtgctctcgttgg 18872
>gb|AF215855.1|AF215855 Arabidopsis thaliana hexose transporter (pGlcT) gene, partial cds; nuclear gene for chloroplast product Length = 2909 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 229 ttgtccttcacctggaaggctttggcaccttattctggcactcttgccgttgttggcact 288 ||||||||||| ||||||||| | || | |||||||| || |||||||||||||| ||| Sbjct: 2144 ttgtccttcacatggaaggctcttgctgcctattctggaacccttgccgttgttggaact 2203 Query: 289 gtcctgta 296 || ||||| Sbjct: 2204 gttctgta 2211 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 31 ataaatgctgttgtgtactactctacatctgtgttccgcagtgcaggcattgcatctgat 90 ||||| || |||||||| ||||| ||||| || ||||| ||||| || || ||| ||| Sbjct: 1767 ataaacgcagttgtgtattactccacatcggtattccgtagtgcgggaatccaatcagat 1826 Query: 91 gttgcagcgagtgctcttgttgg 113 |||||||| |||||||| ||||| Sbjct: 1827 gttgcagccagtgctctcgttgg 1849
>gb|AC121794.3| Mus musculus BAC clone RP23-413C3 from chromosome 3, complete sequence Length = 195453 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 tggcataaatgctgttgtgtac 48 |||||||||||||||||||||| Sbjct: 140670 tggcataaatgctgttgtgtac 140649
>emb|AL109953.24|HSDJ746H2 Human DNA sequence from clone RP4-746H2 on chromosome 20 Contains the MRPS11P1 gene for mitochondrial ribosmal protein S11 pseudogene 1, complete sequence Length = 148859 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 ctggccctgttccagctttgct 341 |||||||||||||||||||||| Sbjct: 11560 ctggccctgttccagctttgct 11581
>emb|BX649169.1|HSM809321 Homo sapiens mRNA; cDNA DKFZp686A2394 (from clone DKFZp686A2394) Length = 5053 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 atcttcactgatggacaagcaa 165 |||||||||||||||||||||| Sbjct: 455 atcttcactgatggacaagcaa 476
>dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51K10, complete sequence Length = 111591 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 atcttcactgatggacaagcaa 165 |||||||||||||||||||||| Sbjct: 80468 atcttcactgatggacaagcaa 80447
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 144 atcttcactgatggacaagcaa 165 |||||||||||||||||||||| Sbjct: 33181 atcttcactgatggacaagcaa 33160
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tgctccttcctgaaatatttg 358 ||||||||||||||||||||| Sbjct: 107808 tgctccttcctgaaatatttg 107828
>gb|AC026730.6| Homo sapiens chromosome 5 clone CTD-2295C16, complete sequence Length = 134054 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcgatgttactcttgtcattg 231 ||||||||||||||||||||| Sbjct: 102318 tcgatgttactcttgtcattg 102298
>gb|AC140172.3| Homo sapiens chromosome 5 clone RP11-811J10, complete sequence Length = 178207 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcgatgttactcttgtcattg 231 ||||||||||||||||||||| Sbjct: 139614 tcgatgttactcttgtcattg 139594
>gb|AC093274.4| Homo sapiens chromosome 5 clone RP11-374A4, complete sequence Length = 186608 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcgatgttactcttgtcattg 231 ||||||||||||||||||||| Sbjct: 20346 tcgatgttactcttgtcattg 20326
>dbj|BS000019.1| Pan troglodytes chromosome 22 clone:PTB-023I17, map 22, complete sequences Length = 141751 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ttgctccttcctgaaatattt 357 ||||||||||||||||||||| Sbjct: 85375 ttgctccttcctgaaatattt 85355
>emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009 Length = 340000 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ttgctccttcctgaaatattt 357 ||||||||||||||||||||| Sbjct: 287666 ttgctccttcctgaaatattt 287646
>gb|L43967.2| Mycoplasma genitalium G37, complete genome Length = 580076 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cttctcataacaagcttttct 198 ||||||||||||||||||||| Sbjct: 209193 cttctcataacaagcttttct 209173
>emb|AJ006997.1|HS190A9 Homo sapiens chromosome 21 PAC RPCIP704A9190Q2, complete sequence Length = 123708 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ttgctccttcctgaaatattt 357 ||||||||||||||||||||| Sbjct: 72193 ttgctccttcctgaaatattt 72173
>gb|BC106137.1| Mus musculus ribosomal protein S13, mRNA (cDNA clone MGC:118043 IMAGE:4990874), complete cds Length = 528 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 460 tggcataaatgctgttgtgt 479
>gb|AC104918.13| Mus musculus chromosome 7, clone RP23-335G1, complete sequence Length = 204099 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 110569 tggcataaatgctgttgtgt 110588
>gb|AC093366.9| Mus musculus chromosome 8, clone RP23-60P23, complete sequence Length = 230236 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 gtatgtgctgtctttcgctcttggagct 321 |||||||||||||||||| || |||||| Sbjct: 107926 gtatgtgctgtctttcgcactgggagct 107953
>ref|NM_026533.1| Mus musculus ribosomal protein S13 (Rps13), mRNA Length = 522 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 477 tggcataaatgctgttgtgt 496
>gb|AY545983.1| Culex pipiens esterase A5 (Est-3) gene, complete cds Length = 1984 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ttttgttcagcaacttgctg 28 |||||||||||||||||||| Sbjct: 299 ttttgttcagcaacttgctg 280
>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence Length = 249789 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 206354 tggcataaatgctgttgtgt 206335
>gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome 17, complete sequence Length = 179745 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 149853 tggcataaatgctgttgtgt 149872
>ref|XM_989679.1| PREDICTED: Mus musculus similar to ribosomal protein S13 (LOC671887), mRNA Length = 560 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 482 tggcataaatgctgttgtgt 501
>ref|XM_001000226.1| PREDICTED: Mus musculus similar to ribosomal protein S13 (LOC668239), mRNA Length = 560 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 482 tggcataaatgctgttgtgt 501
>ref|XR_003543.1| PREDICTED: Mus musculus similar to ribosomal protein S13 (LOC671723), mRNA Length = 544 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 481 tggcataaatgctgttgtgt 500
>ref|XM_908471.2| PREDICTED: Mus musculus similar to ribosomal protein S13 (LOC633920), mRNA Length = 552 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 480 tggcataaatgctgttgtgt 499
>ref|XM_889857.2| PREDICTED: Mus musculus similar to ribosomal protein S13 (LOC625298), mRNA Length = 552 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 480 tggcataaatgctgttgtgt 499
>gb|AC138618.5| Mus musculus BAC clone RP23-335D4 from chromosome 7, complete sequence Length = 189419 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 158007 tggcataaatgctgttgtgt 158026
>emb|AJ508935.1|PFR508935 Propionibacterium freudenreichii subsp. shermanii eno1 gene for enolase 1 Length = 1290 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 cggcaatgtggtcgagacca 541 |||||||||||||||||||| Sbjct: 204 cggcaatgtggtcgagacca 223
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggacaagcaaggaaggaag 174 |||||||||||||||||||| Sbjct: 213086 tggacaagcaaggaaggaag 213067
>gb|BC011192.1| Mus musculus ribosomal protein S13, mRNA (cDNA clone MGC:18694 IMAGE:4016679), complete cds Length = 1331 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 1271 tggcataaatgctgttgtgt 1290
>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the Kcnj12 gene for potassium inwardly-rectifying channel subfamily J member 12, a ribosomal protein L27a (Rpl27a) pseudogene, the Tnfrsf13b gene for tumor necrosis factor receptor superfamily member 13b, the Usp22 gene for ubiquitin specific protease 22, a ribosomal protein S13 (Rps13) pseudogene, the Aldh3a1 gene for aldehyde dehydrogenase family 3 subfamily A1, the 3' end of one variant of the Aldh3a2 gene for aldehyde dehydrogenase family 3 subfamily A2 and three CpG islands, complete sequence Length = 241400 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 218245 tggcataaatgctgttgtgt 218226
>gb|AC113139.2| Homo sapiens chromosome 8, clone CTD-3214K23, complete sequence Length = 185102 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aggaaggaagagccttctca 184 |||||||||||||||||||| Sbjct: 84779 aggaaggaagagccttctca 84760
>dbj|AK151043.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022B07 product:ribosomal protein S13, full insert sequence Length = 519 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 477 tggcataaatgctgttgtgt 496
>dbj|AK151671.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830033F16 product:ribosomal protein S13, full insert sequence Length = 523 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 478 tggcataaatgctgttgtgt 497
>dbj|AK166691.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0003E23 product:ribosomal protein S13, full insert sequence Length = 522 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 477 tggcataaatgctgttgtgt 496
>dbj|AK161798.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030430E16 product:ribosomal protein S13, full insert sequence Length = 2362 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 2317 tggcataaatgctgttgtgt 2336
>gb|AF032920.1|AF032920 Mus musculus cytosolic class 3 aldehyde dehydrogenase (Adh4) gene, 5' flanking region sequence Length = 3181 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 150 tggcataaatgctgttgtgt 131
>dbj|AK018703.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610006G09 product:ribosomal protein S13, full insert sequence Length = 521 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 476 tggcataaatgctgttgtgt 495
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tggacaagcaaggaaggaag 174 |||||||||||||||||||| Sbjct: 119823 tggacaagcaaggaaggaag 119842
>dbj|AK088237.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430007M13 product:ribosomal protein S13, full insert sequence Length = 1154 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 1109 tggcataaatgctgttgtgt 1128
>gb|DQ089481.1| Homo sapiens xanthine dehydrogenase (XDH) gene, complete cds Length = 82011 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 atggacaagcaaggaaggaa 173 |||||||||||||||||||| Sbjct: 42020 atggacaagcaaggaaggaa 42039
>dbj|AK012479.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700063M04 product:ribosomal protein S13, full insert sequence Length = 522 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 477 tggcataaatgctgttgtgt 496
>dbj|AK076060.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700056G11 product:ribosomal protein S13, full insert sequence Length = 533 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 476 tggcataaatgctgttgtgt 495
>gb|AY585926.1| Paxillus involutus strain ATCC 200175 CipC1 protein (cipC1) mRNA, complete cds Length = 435 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 tggtcgagaccaaggggcga 549 |||||||||||||||||||| Sbjct: 265 tggtcgagaccaaggggcga 284
>gb|AC025910.19|AC025910 Mus musculus 11 BAC RP23-40J4 (Roswell Park Cancer Institute Mouse BAC) complete sequence Length = 240536 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 102197 tggcataaatgctgttgtgt 102216
>gb|BC090397.1| Mus musculus ribosomal protein S13, mRNA (cDNA clone MGC:102403 IMAGE:5150054), complete cds Length = 520 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 459 tggcataaatgctgttgtgt 478
>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence Length = 249251 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tggcataaatgctgttgtgt 46 |||||||||||||||||||| Sbjct: 69859 tggcataaatgctgttgtgt 69878
>gb|AC157784.2| Mus musculus chromosome 18, clone RP24-163C18, complete sequence Length = 182283 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gagctggccctgttccagct 336 |||||||||||||||||||| Sbjct: 52015 gagctggccctgttccagct 52034
>gb|AC161932.5| Mus musculus chromosome 18, clone RP24-78F20, complete sequence Length = 166896 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 gagctggccctgttccagct 336 |||||||||||||||||||| Sbjct: 165341 gagctggccctgttccagct 165360
>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete sequence Length = 221319 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 gtttttgttcagcaacttgc 26 |||||||||||||||||||| Sbjct: 172024 gtttttgttcagcaacttgc 172043
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tttttgttcagcaacttgct 27 |||||||||||||||||||| Sbjct: 106305 tttttgttcagcaacttgct 106324
>emb|AL807801.3| Mouse DNA sequence from clone RP23-235A15 on chromosome 2, complete sequence Length = 158498 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 gcataaatgctgttgtgtac 48 |||||||||||||||||||| Sbjct: 73172 gcataaatgctgttgtgtac 73191
>emb|AL121657.4|CNS01DS7 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 41M14 of library CITB_978_SKB from chromosome 2 of Homo sapiens (Human) Length = 151949 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 atggacaagcaaggaaggaa 173 |||||||||||||||||||| Sbjct: 145414 atggacaagcaaggaaggaa 145395 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,878,213 Number of Sequences: 3902068 Number of extensions: 5878213 Number of successful extensions: 95337 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95148 Number of HSP's gapped (non-prelim): 178 length of query: 666 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 643 effective length of database: 17,143,297,704 effective search space: 11023140423672 effective search space used: 11023140423672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
