Clone Name | basd23k01 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ272309.1|HVU272309 Hordeum vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 995 bits (502), Expect = 0.0 Identities = 502/502 (100%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 448 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 508 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 568 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 628 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 688 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 748 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 808 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 868 Query: 482 ttggtgataactctgatcttcg 503 |||||||||||||||||||||| Sbjct: 869 ttggtgataactctgatcttcg 890
>emb|AM055812.1| Hordeum vulgare subsp. vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 995 bits (502), Expect = 0.0 Identities = 502/502 (100%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 448 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 508 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 568 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 628 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 688 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 748 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 808 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 868 Query: 482 ttggtgataactctgatcttcg 503 |||||||||||||||||||||| Sbjct: 869 ttggtgataactctgatcttcg 890
>gb|AF408843.1| Triticum aestivum sucrose transporter SUT1B mRNA, complete cds Length = 2021 Score = 805 bits (406), Expect = 0.0 Identities = 478/502 (95%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 379 gtggttcaaccatgcgttgggctctacagtgacaagtgcacttctagatggggaagacgc 438 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 || || |||||||||||||||| | | ||||||||| |||||||| | ||||||||||| Sbjct: 439 agaccgtttattctgacaggatatatcctcatctgcattgctgtcgtagtcgtcggcttc 498 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 499 tcggctgacattggagctgctctgggtgacagcaaggaagagtgcagtctctatcatggg 558 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 559 cctcgttggcacgctgcaattgtgtatgttcttggattctggctccttgacttctccaac 618 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 619 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagctcaacatggaccc 678 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 679 agtgcagcaaattcaatcttctgttcttggatggcactaggaaatatccttggatactcc 738 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 739 tctggttccacaaataactggcacaagtggtttccgttcctccggacaagggcttgctgt 798 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 799 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctggccttctgt 858 Query: 482 ttggtgataactctgatcttcg 503 |||||||||||| ||||||||| Sbjct: 859 ttggtgataactgtgatcttcg 880
>gb|BT009324.1| Triticum aestivum clone wlm24.pk0015.g11:fis, full insert mRNA sequence Length = 2160 Score = 765 bits (386), Expect = 0.0 Identities = 473/502 (94%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 455 gtggttcaaccatgcgttgggctctacagtgacaagtgcacttcaagatggggaagacgc 514 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 || || || ||||||||||||||| | ||||||||| |||||||| | ||||||||||| Sbjct: 515 agaccgttcattctgacaggatgtatcctcatctgcattgctgtcgtggtcgtcggcttc 574 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 575 tcggctgacattggagctgctctgggtgacagcaaggaagagtgcagtctctatcatggg 634 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 635 cctcgttggcacgctgcaattgtgtatgttcttggattctggctccttgacttctccaac 694 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 ||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 695 aacacagtgcaaggaccagcgcgtgctctgatggctgatttatcagcccagcatggaccc 754 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 755 agtgcagcaaattcaatcttctgttcttggatggcactgggaaatatcctaggatactca 814 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 815 tctggttccacaaataactggcacaagtggtttccgttcctccggacaagggcttgctgt 874 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 875 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctggccttctgt 934 Query: 482 ttggtgataactctgatcttcg 503 ||||||||||| ||||||||| Sbjct: 935 ttggtgataaccgtgatcttcg 956
>gb|AF408844.1| Triticum aestivum sucrose transporter SUT1D mRNA, complete cds Length = 2106 Score = 765 bits (386), Expect = 0.0 Identities = 473/502 (94%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 488 gtggttcaaccatgcgttgggctctacagtgacaagtgcacatctagatggggaagacgc 547 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 || || ||||||||||||||||| | ||||||||| ||||||| | ||||||||||| Sbjct: 548 agaccgtttattctgacaggatgcatcctcatctgcattgctgttgtggtcgtcggcttc 607 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 608 tcggctgacattggagctgctctgggtgacagcaaggaagagtgcagtctctatcatggg 667 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 668 cctcgttggcacgctgcaattgtgtatgttcttggattctggctccttgacttctccaac 727 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 728 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagctcagcatggaccc 787 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 788 agtgcagcaaattcaatcttctgttcttggatggcgctaggaaatatccttggatactcc 847 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 848 tctggttccacaaacaactggcacaagtggtttccgttcctccggacaagggcttgctgt 907 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 908 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctggccttctgt 967 Query: 482 ttggtgataactctgatcttcg 503 |||||||||||| ||||||||| Sbjct: 968 ttggtgataactgtgatcttcg 989
>gb|AF408842.1| Triticum aestivum sucrose transporter SUT1A mRNA, complete cds Length = 2134 Score = 765 bits (386), Expect = 0.0 Identities = 473/502 (94%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 477 gtggttcaaccatgcgttgggctctacagtgacaagtgcacttcaagatggggaagacgc 536 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 || || || ||||||||||||||| | ||||||||| |||||||| | ||||||||||| Sbjct: 537 agaccgttcattctgacaggatgtatcctcatctgcattgctgtcgtggtcgtcggcttc 596 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 597 tcggctgacattggagctgctctgggtgacagcaaggaagagtgcagtctctatcatggg 656 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 657 cctcgttggcacgctgcaattgtgtatgttcttggattctggctccttgacttctccaac 716 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 ||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 717 aacacagtgcaaggaccagcgcgtgctctgatggctgatttatcagcccagcatggaccc 776 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 777 agtgcagcaaattcaatcttctgttcttggatggcactgggaaatatcctaggatactca 836 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 837 tctggttccacaaataactggcacaagtggtttccgttcctccggacaagggcttgctgt 896 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 897 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctggccttctgt 956 Query: 482 ttggtgataactctgatcttcg 503 ||||||||||| ||||||||| Sbjct: 957 ttggtgataaccgtgatcttcg 978
>gb|BT009233.1| Triticum aestivum clone wle1n.pk0103.c11:fis, full insert mRNA sequence Length = 2083 Score = 749 bits (378), Expect = 0.0 Identities = 471/502 (93%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 |||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 474 gtggttcaaccatgcgttgggctctacagtgacaagtgcacatctagatggggaagacgc 533 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 || || ||||||||||||||||| | ||||||||| ||||||| | ||||||||||| Sbjct: 534 agaccgtttattctgacaggatgcatcctcatctgcattgctgttgtggtcgtcggcttc 593 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| Sbjct: 594 tcggctgacattggagctggtctgggtgacagcaaggaagagtgcagtctctatcatggg 653 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 654 cctcgttggcacgctgcaattgtgtatgttcttggattctggctccttgacttctccaac 713 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 714 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagctcagcatggaccc 773 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 774 agtgcagcaaattcaatcttctgttcttggatggcgctaggaaatatccttggatactcc 833 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 834 tctggttccacaaacaactggcacaagtggtttccgttcctccggacaagggcttgctgt 893 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtccttagct 481 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | Sbjct: 894 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctggtcctggccttctgt 953 Query: 482 ttggtgataactctgatcttcg 503 |||||||||||| ||||||||| Sbjct: 954 ttggtgataactgtgatcttcg 975
>gb|AY780256.1| Saccharum hybrid cultivar sucrose transporter (SUT1) mRNA, complete cds Length = 1554 Score = 385 bits (194), Expect = e-103 Identities = 401/470 (85%) Strand = Plus / Plus Query: 2 gtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgc 61 ||||||||||| | ||||| || |||||||| | |||||| | |||||||||||||| Sbjct: 241 gtggttcaaccgttggttggcctgtacagtgataggtgtacagcaagatggggaagacgg 300 Query: 62 aggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttc 121 ||||||||||| |||||||||||| | |||||| ||||||||||||| | || ||||| Sbjct: 301 aggccatttatcctgacaggatgtattctcatcagccttgctgtcattgttgttggcttt 360 Query: 122 tcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatggg 181 ||| | ||||| ||||||||||| || |||| |||||| | ||||||||||||||||| Sbjct: 361 tcgtcagacatcggagctgctctaggggatacaaaggaacattgcagtctctatcatggt 420 Query: 182 cctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaac 241 ||||| ||||| ||||||||||| |||||||| || || ||||| |||||||| |||||| Sbjct: 421 cctcgctggcatgctgcaattgtatatgttctggggttttggctccttgacttttccaac 480 Query: 242 aacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggaccc 301 || ||||||||||||||||| |||||| ||||||||||||| | | || ||||| || Sbjct: 481 aatactgtgcaaggtccagcacgtgctatgatggctgatttgtgcggtcatcatgggcct 540 Query: 302 agtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactcc 361 ||||| || |||||||||||||||||||||||||| || ||||| |||||||| || ||| Sbjct: 541 agtgcagctaattcaatcttctgttcttggatggcgctgggaaacatcctaggctattcc 600 Query: 362 tctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctgt 421 |||||||| ||||| ||||||||||||||||||||||||||| |||| || |||||| Sbjct: 601 tctggttccacaaacaactggcacaagtggtttcccttcctcaaaacaaatgcctgctgt 660 Query: 422 gaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcct 471 |||||||| ||||| |||||||| |||||||||||||| ||| ||||||| Sbjct: 661 gaagcctgtgcaaacctgaaaggtgcatttctggtggctgtggtgttcct 710
>dbj|AB008464.1| Zea mays mRNA for Sucrose Transporter, complete cds Length = 1834 Score = 327 bits (165), Expect = 2e-86 Identities = 360/425 (84%) Strand = Plus / Plus Query: 47 agatggggaagacgcaggccatttattctgacaggatgtgtgctcatctgccttgctgtc 106 |||||||||||||||||||||||||| |||| |||||| |||||||||||||||| ||| Sbjct: 465 agatggggaagacgcaggccatttatcctgataggatgcatgctcatctgccttgccgtc 524 Query: 107 atcatcgtcggcttctcggctgacattggagctgctctgggcgatagcaaggaagagtgc 166 || | || ||||||||| | ||||| ||||||||||| || || | |||||| | ||| Sbjct: 525 attgttgttggcttctcgtccgacatcggagctgctctaggggacacgaaggaacactgc 584 Query: 167 agtctctatcatgggcctcgttggcacgctgcaattgtgtatgttcttggattctggctt 226 || ||||| || || ||||||||||| ||||| || || || ||||| || || ||||| Sbjct: 585 agcctctaccacggccctcgttggcatgctgcgatcgtctacgttctggggttttggctc 644 Query: 227 cttgacttctccaacaacactgtgcaaggtccagcgcgtgctctgatggctgatttatca 286 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | | Sbjct: 645 cttgacttctccaacaatactgtgcaaggtccagcgcgtgctatgatggctgatctgtgc 704 Query: 287 gcgcaacatggacccagtgctgcaaattcaatcttctgttcttggatggcactaggaaat 346 | || ||||| || ||||| || || ||||||||||||||||||||||| || ||||| Sbjct: 705 ggtcatcatgggcctagtgcagccaactcaatcttctgttcttggatggcgctgggaaac 764 Query: 347 atcctaggatactcctctggttcaacaaataactggcacaagtggtttcccttcctccgg 406 |||||||| || ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 765 atcctaggctattcctctggttccacaaacaactggcacaagtggtttccgttcctttta 824 Query: 407 acaagggcttgctgtgaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctg 466 |||| || |||||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct: 825 acaaacgcgtgctgtgaagcctgcgcaaacctgaaaggcgcgtttctggtggctgtggtg 884 Query: 467 ttcct 471 ||||| Sbjct: 885 ttcct 889
>dbj|AK100027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J01, full insert sequence Length = 2062 Score = 291 bits (147), Expect = 1e-75 Identities = 393/475 (82%) Strand = Plus / Plus Query: 1 ggtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacg 60 |||||||||||||||||| || || |||||||| | ||| || || | |||||||||||| Sbjct: 500 ggtggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacg 559 Query: 61 caggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggctt 120 ||||||| |||||| |||||||||||| | || ||| | |||||| | | | || || Sbjct: 560 aaggccatatattcttacaggatgtgtgttgatatgcttggctgtcgtagttattggatt 619 Query: 121 ctcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatgg 180 || |||||||||||| || |||| |||| |||||||| |||||| |||| ||||| Sbjct: 620 ttcagctgacattggatacgccatgggtgatacaaaggaagactgcagtgtctaccatgg 679 Query: 181 gcctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaa 240 | || ||||| ||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 680 atcacggtggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaa 739 Query: 241 caacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggacc 300 |||||||||||| |||||||| |||||||| |||||||||||||||| | |||||||| Sbjct: 740 caacactgtgcagggtccagcacgtgctctaatggctgatttatcaggacgtcatggacc 799 Query: 301 cagtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactc 360 | | || || || ||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 800 tggcacagctaactccatcttctgttcttggatggcaatgggaaacatcctaggatactc 859 Query: 361 ctctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctg 420 ||||||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 860 ctctggttccacaaacaattggcacaagtggtttccattccttaaaacaagagcttgctg 919 Query: 421 tgaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtcc 475 |||||| || |||||| ||||||| |||||||||||||| ||| | ||||||||| Sbjct: 920 tgaagcttgtgcaaatttgaaaggtgcatttctggtggctgtgattttcctgtcc 974
>dbj|D87819.1| Oryza sativa (japonica cultivar-group) mRNA for sucrose transporter, complete cds Length = 2036 Score = 291 bits (147), Expect = 1e-75 Identities = 393/475 (82%) Strand = Plus / Plus Query: 1 ggtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacg 60 |||||||||||||||||| || || |||||||| | ||| || || | |||||||||||| Sbjct: 363 ggtggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacg 422 Query: 61 caggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggctt 120 ||||||| |||||| |||||||||||| | || ||| | |||||| | | | || || Sbjct: 423 aaggccatatattcttacaggatgtgtgttgatatgcttggctgtcgtagttattggatt 482 Query: 121 ctcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatgg 180 || |||||||||||| || |||| |||| |||||||| |||||| |||| ||||| Sbjct: 483 ttcagctgacattggatacgccatgggtgatacaaaggaagactgcagtgtctaccatgg 542 Query: 181 gcctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaa 240 | || ||||| ||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 543 atcacggtggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaa 602 Query: 241 caacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggacc 300 |||||||||||| |||||||| |||||||| |||||||||||||||| | |||||||| Sbjct: 603 caacactgtgcagggtccagcacgtgctctaatggctgatttatcaggacgtcatggacc 662 Query: 301 cagtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactc 360 | | || || || ||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 663 tggcacagctaactccatcttctgttcttggatggcaatgggaaacatcctaggatactc 722 Query: 361 ctctggttcaacaaataactggcacaagtggtttcccttcctccggacaagggcttgctg 420 ||||||||| ||||| || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 723 ctctggttccacaaacaattggcacaagtggtttccattccttaaaacaagagcttgctg 782 Query: 421 tgaagcctgcgcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtcc 475 |||||| || |||||| ||||||| |||||||||||||| ||| | ||||||||| Sbjct: 783 tgaagcttgtgcaaatttgaaaggtgcatttctggtggctgtgattttcctgtcc 837
>gb|AY106212.1| Zea mays PCO103031 mRNA sequence Length = 2088 Score = 283 bits (143), Expect = 3e-73 Identities = 377/455 (82%) Strand = Plus / Plus Query: 17 gttgggctctacagtgacaagtgtacttccagatggggaagacgcaggccatttattctg 76 ||||| || ||||| |||| |||||| || |||||||| ||||| ||||| ||||| ||| Sbjct: 460 gttggcctgtacagcgacaggtgtacatcgagatgggggagacggaggccgtttatcctg 519 Query: 77 acaggatgtgtgctcatctgccttgctgtcatcatcgtcggcttctcggctgacattgga 136 ||||| || ||||||||||| |||| ||||| | ||||| |||||| | ||||| ||| Sbjct: 520 acagggtgcatgctcatctgcgttgccgtcattgttgtcggattctcgtcagacatcgga 579 Query: 137 gctgctctgggcgatagcaaggaagagtgcagtctctatcatgggcctcgttggcacgct 196 |||||||| || || | |||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 580 gctgctctaggggacacgaaggaacactgcagcctctaccacggtcctcgttggcacgct 639 Query: 197 gcaattgtgtatgttcttggattctggcttcttgacttctccaacaacactgtgcaaggt 256 || || ||||| ||||| || || ||||| |||||||||||||||||||||||||| ||| Sbjct: 640 gcgatcgtgtacgttctggggttttggctccttgacttctccaacaacactgtgcagggt 699 Query: 257 ccagcgcgtgctctgatggctgatttatcagcgcaacatggacccagtgctgcaaattca 316 ||||| |||||| ||||||||||| ||| | || ||||| || ||||| || || || Sbjct: 700 ccagcacgtgctatgatggctgatctatgtgaccatcatgggccaagtgcggctaactcc 759 Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 |||||||||||||||||||| || ||||| |||||||| ||||||||||| || || || Sbjct: 760 atcttctgttcttggatggcgctgggaaacatcctaggctactcctctggctccacgaac 819 Query: 377 aactggcacaagtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaat 436 || ||||||||||||||||||||||| || || || |||||||| ||||| || || Sbjct: 820 aattggcacaagtggtttcccttccttaaaacgagcgcctgctgtgaggcctgtgcgaac 879 Query: 437 ctgaaaggcgcatttctggtggcagtgctgttcct 471 |||||||| |||||||||||||| ||| ||||||| Sbjct: 880 ctgaaaggtgcatttctggtggccgtggtgttcct 914
>gb|AF378185.1|AF378185 Oryza sativa cultivar Stejaree45 sucrose transporter mRNA, partial cds Length = 408 Score = 210 bits (106), Expect = 3e-51 Identities = 304/370 (82%) Strand = Plus / Plus Query: 1 ggtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacg 60 |||||||||||||||||| || || |||||||| | ||| || || | |||||||||||| Sbjct: 39 ggtggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacg 98 Query: 61 caggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggctt 120 ||||||| |||||| |||||||||||| | || ||| | |||||| | | | || || Sbjct: 99 gaggccatatattcttacaggatgtgtgttgatatgcttggctgtcgtagttattggatt 158 Query: 121 ctcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatgg 180 || |||||||||||| || |||| |||| |||||||| |||||| |||| ||||| Sbjct: 159 ttcagctgacattggatacgccatgggtgatacaaaggaagactgcagtgtctaccatgg 218 Query: 181 gcctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaa 240 | || ||||| ||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 219 atcacggtggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaa 278 Query: 241 caacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggacc 300 |||||||||||| |||||||| |||||||| |||||||||||||||| | |||||||| Sbjct: 279 caacactgtgcagggtccagcacgtgctctaatggctgatttatcaggacgtcatggacc 338 Query: 301 cagtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactc 360 | | || || || ||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 339 tggcacagctaactccatcttctgttcttggatggcaatgggaaacatcctaggatactc 398 Query: 361 ctctggttca 370 |||||||||| Sbjct: 399 ctctggttca 408
>gb|AF378186.1|AF378186 Oryza sativa cultivar Milyang23 sucrose transporter mRNA, partial cds Length = 405 Score = 204 bits (103), Expect = 2e-49 Identities = 301/367 (82%) Strand = Plus / Plus Query: 1 ggtggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacg 60 |||||||||||||||||| || || |||||||| | ||| || || | |||||||||||| Sbjct: 39 ggtggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacg 98 Query: 61 caggccatttattctgacaggatgtgtgctcatctgccttgctgtcatcatcgtcggctt 120 ||||||| |||||| |||||||||||| | || ||| | |||||| | | | || || Sbjct: 99 aaggccatatattcttacaggatgtgtgttgatatgcttggctgtcgtagttattggatt 158 Query: 121 ctcggctgacattggagctgctctgggcgatagcaaggaagagtgcagtctctatcatgg 180 || |||||||||||| || |||| |||| |||||||| |||||| |||| ||||| Sbjct: 159 ttcagctgacattggatacgccatgggtgatacaaaggaagactgcagtgtctaccatgg 218 Query: 181 gcctcgttggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaa 240 | || ||||| ||||| ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 219 atcacggtggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaa 278 Query: 241 caacactgtgcaaggtccagcgcgtgctctgatggctgatttatcagcgcaacatggacc 300 |||||||||||| |||||||| |||||||| |||||||||||||||| | |||||||| Sbjct: 279 caacactgtgcagggtccagcacgtgctctaatggctgatttatcaggacgtcatggacc 338 Query: 301 cagtgctgcaaattcaatcttctgttcttggatggcactaggaaatatcctaggatactc 360 | | || || || ||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 339 tggcacagctaactccatcttctgttcttggatggcaatgggaaacatcctaggatactc 398 Query: 361 ctctggt 367 ||||||| Sbjct: 399 ctctggt 405
>gb|AF408845.1| Triticum aestivum sucrose transporter SUT1D gene, complete cds Length = 6582 Score = 172 bits (87), Expect = 7e-40 Identities = 90/91 (98%) Strand = Plus / Plus Query: 164 tgcagtctctatcatgggcctcgttggcacgctgcaattgtgtatgttcttggattctgg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4084 tgcagtctctatcatgggcctcgttggcacgctgcaattgtgtatgttcttggattctgg 4143 Query: 224 cttcttgacttctccaacaacactgtgcaag 254 || |||||||||||||||||||||||||||| Sbjct: 4144 ctccttgacttctccaacaacactgtgcaag 4174 Score = 153 bits (77), Expect = 7e-34 Identities = 92/97 (94%) Strand = Plus / Plus Query: 293 catggacccagtgctgcaaattcaatcttctgttcttggatggcactaggaaatatccta 352 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4426 catggacccagtgcagcaaattcaatcttctgttcttggatggcgctaggaaatatcctt 4485 Query: 353 ggatactcctctggttcaacaaataactggcacaagt 389 ||||||||||||||||| ||||| ||||||||||||| Sbjct: 4486 ggatactcctctggttccacaaacaactggcacaagt 4522 Score = 143 bits (72), Expect = 6e-31 Identities = 75/76 (98%) Strand = Plus / Plus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaaggcgc 447 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4609 gtggtttccgttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaaggcgc 4668 Query: 448 atttctggtggcagtg 463 |||||||||||||||| Sbjct: 4669 atttctggtggcagtg 4684 Score = 131 bits (66), Expect = 2e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgcag 63 |||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 3740 ggttcaaccatgcgttgggctctacagtgacaagtgcacatctagatggggaagacgcag 3799 Query: 64 gccatttattctgacaggatgtgtgctcatctgccttgctgt 105 || ||||||||||||||||| | ||||||||| ||||||| Sbjct: 3800 accgtttattctgacaggatgcatcctcatctgcattgctgt 3841 Score = 99.6 bits (50), Expect = 9e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 111 tcgtcggcttctcggctgacattggagctgctctgggcgatagcaaggaagagtgcag 168 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 3940 tcgtcggcttctcggctgacattggagctgctctgggtgacagcaaggaagagtgcag 3997 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 254 ggtccagcgcgtgctctgatggctgatttatcag 287 |||||||||||||||||||||||||||||||||| Sbjct: 4261 ggtccagcgcgtgctctgatggctgatttatcag 4294 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 463 gctgttcctgtccttagctttggtgataactctgatcttcg 503 |||||||||| |||| ||||||||||||| ||||||||| Sbjct: 4890 gctgttcctggccttctgtttggtgataactgtgatcttcg 4930
>dbj|AB071809.1| Oryza sativa (japonica cultivar-group) OsSUT3 mRNA for sucrose transporter, complete cds Length = 1713 Score = 153 bits (77), Expect = 7e-34 Identities = 191/229 (83%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgcaaggtccagcgcgtgctctgatg 274 ||||||||||| || ||||||||||||||||| ||||| |||||||| || ||||||||| Sbjct: 517 ggattctggctgctcgacttctccaacaacaccgtgcagggtccagctcgcgctctgatg 576 Query: 275 gctgatttatcagcgcaacatggacccagtgctgcaaattcaatcttctgttcttggatg 334 || ||||| |||| | ||||| || || || || || | |||||||||||||||||| Sbjct: 577 gccgatttgtcaggtcggcatggcccaagcgcggccaacgcgatcttctgttcttggatg 636 Query: 335 gcactaggaaatatcctaggatactcctctggttcaacaaataactggcacaagtggttt 394 ||| |||| || ||||| || |||||||| || || || ||| ||||||||||||||||| Sbjct: 637 gcattaggcaacatccttggctactcctccggatccaccaatgactggcacaagtggttt 696 Query: 395 cccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 ||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 697 ccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 745 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 5 gttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 ||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 307 gttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 350
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| Sbjct: 3781648 atcttctgttcttggatggcaatgggaaacatcctaggatactcctctggttccacaaac 3781589 Query: 377 aactggcacaagt 389 || |||||||||| Sbjct: 3781588 aattggcacaagt 3781576 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgcag 63 ||||||||||||||| || || |||||||| | ||| || || | |||||||||||| || Sbjct: 3782368 ggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacgaag 3782309 Query: 64 gccatttattctgacaggatgtgtg 88 ||||| |||||| |||||||||||| Sbjct: 3782308 gccatatattcttacaggatgtgtg 3782284 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 188 tggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaacaacact 247 ||||| ||||| ||||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct: 3782030 tggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaacaacact 3781971 Query: 248 gtgca 252 ||||| Sbjct: 3781970 gtgca 3781966 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 407 acaagggcttgctgtgaagcctgcgcaaatctgaaaggcgcatttctggtggc 459 ||||| |||||||||||||| || |||||| ||||||| |||||||||||||| Sbjct: 3781392 acaagagcttgctgtgaagcttgtgcaaatttgaaaggtgcatttctggtggc 3781340 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 ggtccagcgcgtgctctgatggctgatttatcag 287 |||||||| |||||||| |||||||||||||||| Sbjct: 3781877 ggtccagcacgtgctctaatggctgatttatcag 3781844
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| Sbjct: 60272 atcttctgttcttggatggcaatgggaaacatcctaggatactcctctggttccacaaac 60213 Query: 377 aactggcacaagt 389 || |||||||||| Sbjct: 60212 aattggcacaagt 60200 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgcag 63 ||||||||||||||| || || |||||||| | ||| || || | |||||||||||| || Sbjct: 60992 ggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacgaag 60933 Query: 64 gccatttattctgacaggatgtgtg 88 ||||| |||||| |||||||||||| Sbjct: 60932 gccatatattcttacaggatgtgtg 60908 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 188 tggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaacaacact 247 ||||| ||||| ||||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct: 60654 tggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaacaacact 60595 Query: 248 gtgca 252 ||||| Sbjct: 60594 gtgca 60590 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 407 acaagggcttgctgtgaagcctgcgcaaatctgaaaggcgcatttctggtggc 459 ||||| |||||||||||||| || |||||| ||||||| |||||||||||||| Sbjct: 60016 acaagagcttgctgtgaagcttgtgcaaatttgaaaggtgcatttctggtggc 59964 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 ggtccagcgcgtgctctgatggctgatttatcag 287 |||||||| |||||||| |||||||||||||||| Sbjct: 60501 ggtccagcacgtgctctaatggctgatttatcag 60468
>gb|AF280050.1| Oryza sativa (indica cultivar-group) sucrose transporter (SUT1) gene, complete cds Length = 7717 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| Sbjct: 5437 atcttctgttcttggatggcaatgggaaacatcctaggatactcctctggttccacaaac 5496 Query: 377 aactggcacaagt 389 || |||||||||| Sbjct: 5497 aattggcacaagt 5509 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 188 tggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaacaacact 247 ||||| ||||| ||||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct: 5055 tggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaacaacact 5114 Query: 248 gtgca 252 ||||| Sbjct: 5115 gtgca 5119 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgcag 63 ||||||||||||||| || || |||||||| | ||| || || | |||||||||||| || Sbjct: 4718 ggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacggag 4777 Query: 64 gccatttattctgacaggatgtgtg 88 ||||| |||||| |||||||||||| Sbjct: 4778 gccatatattcttacaggatgtgtg 4802 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 407 acaagggcttgctgtgaagcctgcgcaaatctgaaaggcgcatttctggtggc 459 ||||| |||||||||||||| || |||||| ||||||| |||||||||||||| Sbjct: 5693 acaagagcttgctgtgaagcttgtgcaaatttgaaaggtgcatttctggtggc 5745 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 254 ggtccagcgcgtgctctgatggctgatttatcag 287 |||||||| |||||||| |||||||||||||||| Sbjct: 5208 ggtccagcacgtgctctaatggctgatttatcag 5241
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| Sbjct: 3781759 atcttctgttcttggatggcaatgggaaacatcctaggatactcctctggttccacaaac 3781700 Query: 377 aactggcacaagt 389 || |||||||||| Sbjct: 3781699 aattggcacaagt 3781687 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccagatggggaagacgcag 63 ||||||||||||||| || || |||||||| | ||| || || | |||||||||||| || Sbjct: 3782479 ggttcaaccatgcgtgggtctatacagtgataggtgcacctcaaaatggggaagacgaag 3782420 Query: 64 gccatttattctgacaggatgtgtg 88 ||||| |||||| |||||||||||| Sbjct: 3782419 gccatatattcttacaggatgtgtg 3782395 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 188 tggcacgctgcaattgtgtatgttcttggattctggcttcttgacttctccaacaacact 247 ||||| ||||| ||||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct: 3782141 tggcatgctgctattgtatatgtcctgggattctggcttcttgatttttccaacaacact 3782082 Query: 248 gtgca 252 ||||| Sbjct: 3782081 gtgca 3782077 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 407 acaagggcttgctgtgaagcctgcgcaaatctgaaaggcgcatttctggtggc 459 ||||| |||||||||||||| || |||||| ||||||| |||||||||||||| Sbjct: 3781503 acaagagcttgctgtgaagcttgtgcaaatttgaaaggtgcatttctggtggc 3781451 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 254 ggtccagcgcgtgctctgatggctgatttatcag 287 |||||||| |||||||| |||||||||||||||| Sbjct: 3781988 ggtccagcacgtgctctaatggctgatttatcag 3781955
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| |||| || ||||| || |||||||| || || || ||| Sbjct: 113817 atcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaat 113876 Query: 377 aactggcacaagt 389 |||||||||||| Sbjct: 113877 gactggcacaagt 113889 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 113505 ggattctggctgctcgacttctccaacaacaccgtgca 113542 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 |||||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 114060 gtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 114115 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 |||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 111855 ggttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 111899
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| |||| || ||||| || |||||||| || || || ||| Sbjct: 62725 atcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaat 62666 Query: 377 aactggcacaagt 389 |||||||||||| Sbjct: 62665 gactggcacaagt 62653 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 63037 ggattctggctgctcgacttctccaacaacaccgtgca 63000 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Minus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 |||||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 62482 gtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 62427
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| |||| || ||||| || |||||||| || || || ||| Sbjct: 13267568 atcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaat 13267627 Query: 377 aactggcacaagt 389 |||||||||||| Sbjct: 13267628 gactggcacaagt 13267640 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 13267256 ggattctggctgctcgacttctccaacaacaccgtgca 13267293 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 |||||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 13267811 gtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 13267866 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 |||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 13265606 ggttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 13265650
>gb|AF419298.1| Oryza sativa (indica cultivar-group) sucrose transporter gene, complete cds Length = 7518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| |||| || ||||| || |||||||| || || || ||| Sbjct: 4957 atcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaat 5016 Query: 377 aactggcacaagt 389 |||||||||||| Sbjct: 5017 gactggcacaagt 5029 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 4645 ggattctggctgctcgacttctccaacaacaccgtgca 4682 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 |||||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 5200 gtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 5255 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 |||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 3001 ggttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 3045
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 317 atcttctgttcttggatggcactaggaaatatcctaggatactcctctggttcaacaaat 376 ||||||||||||||||||||| |||| || ||||| || |||||||| || || || ||| Sbjct: 13274908 atcttctgttcttggatggcattaggcaacatccttggctactcctccggatccaccaat 13274967 Query: 377 aactggcacaagt 389 |||||||||||| Sbjct: 13274968 gactggcacaagt 13274980 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 13274596 ggattctggctgctcgacttctccaacaacaccgtgca 13274633 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 388 gtggtttcccttcctccggacaagggcttgctgtgaagcctgcgcaaatctgaaag 443 |||||||||||| ||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 13275151 gtggtttccctttctcatgaccagggcttgctgcgaggcctgcgcgaatctcaaag 13275206 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 4 ggttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 |||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 13272946 ggttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 13272990
>dbj|AK071452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091J01, full insert sequence Length = 1959 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 215 ggattctggcttcttgacttctccaacaacactgtgca 252 ||||||||||| || ||||||||||||||||| ||||| Sbjct: 1909 ggattctggctgctcgacttctccaacaacaccgtgca 1946 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 5 gttcaaccatgcgttgggctctacagtgacaagtgtacttccag 48 ||||| |||||||| || || |||||||||||||| || ||||| Sbjct: 260 gttcagccatgcgtcggcctgtacagtgacaagtgcacatccag 303
>ref|XM_470311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1253 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 431 gcaaatctgaaaggcgcatttctggtggcagtgctgttcctgtcc 475 |||||| ||||||| |||||||||||||| ||| | ||||||||| Sbjct: 9 gcaaatttgaaaggtgcatttctggtggctgtgattttcctgtcc 53
>emb|AJ534442.1|PMA534442 Plantago major macronuclear mRNA for sucrose transporter (suc3 gene) Length = 1800 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 239 aacaacactgtgcaaggtccagcgcgtgctctgatggctgatttatcag 287 |||||||||||||| |||||||| || || || ||||||||||||||| Sbjct: 565 aacaacactgtgcagggtccagctcgagcactcctggctgatttatcag 613
>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173752 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 gttcttggattctggcttcttg 230 |||||||||||||||||||||| Sbjct: 82039 gttcttggattctggcttcttg 82018
>gb|AC139376.3| Mus musculus BAC clone RP24-420A20 from chromosome 10, complete sequence Length = 184039 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aagggcttgctgtgaagcctg 429 ||||||||||||||||||||| Sbjct: 29187 aagggcttgctgtgaagcctg 29207
>gb|DQ138373.1| Manihot esculenta sucrose transporter type 2 (SUT2) mRNA, complete cds Length = 2431 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 239 aacaacactgtgcaaggtccagcgcgtgctctgatggctgatttatcag 287 ||||| || ||||| || ||||| |||||||| ||||||||||||||| Sbjct: 794 aacaatacagtgcagggaccagcacgtgctcttctggctgatttatcag 842
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 431 gcaaatctgaaaggcgcatttctggtggc 459 |||||| ||||||| |||||||||||||| Sbjct: 9 gcaaatttgaaaggtgcatttctggtggc 37
>gb|AC095048.3| Homo sapiens BAC clone RP11-239A9 from 4, complete sequence Length = 123661 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 cccagtgctgcaaattcaatcttct 323 |||||||| |||||||||||||||| Sbjct: 70442 cccagtgcagcaaattcaatcttct 70466
>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence Length = 203324 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 aagggcttgctgtgaagcctg 429 ||||||||||||||||||||| Sbjct: 19868 aagggcttgctgtgaagcctg 19848
>gb|AC139724.1| Homo sapiens BAC clone RP11-1H20 from 4, complete sequence Length = 155873 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 cccagtgctgcaaattcaatcttct 323 |||||||| |||||||||||||||| Sbjct: 130887 cccagtgcagcaaattcaatcttct 130911
>ref|XM_466396.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2036 Score = 40.1 bits (20), Expect = 6.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 213 ttggattctggcttcttgacttctccaacaacactgtgcaaggtccagcgcgtgctctga 272 |||| |||||| | ||||||||| | ||||||||||| || || || || ||||| ||| Sbjct: 617 ttggcttctggttccttgacttcgctaacaacactgtccaggggccggctcgtgccatga 676 Query: 273 tggctgat 280 |||||||| Sbjct: 677 tggctgat 684
>gb|AY504969.1| Juglans regia sucrose transporter mRNA, complete cds Length = 1886 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 ttctggcttcttgacttctccaacaaca 245 |||||| |||||||| |||||||||||| Sbjct: 487 ttctgggttcttgacgtctccaacaaca 514
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ttctggcttcttgacttctc 237 |||||||||||||||||||| Sbjct: 122044 ttctggcttcttgacttctc 122025
>gb|AC183529.4| Pan troglodytes BAC clone CH251-669H19 from chromosome 3, complete sequence Length = 216860 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcctgtccttagctttggtg 487 |||||||||||||||||||| Sbjct: 119840 tcctgtccttagctttggtg 119859
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence Length = 162143 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 caaattcaatcttctgttct 328 |||||||||||||||||||| Sbjct: 38539 caaattcaatcttctgttct 38558
>gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromosome 3, complete sequence Length = 220398 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcctgtccttagctttggtg 487 |||||||||||||||||||| Sbjct: 26325 tcctgtccttagctttggtg 26344
>ref|XM_655494.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2982.2), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 atggggaagacgcaggccatttat 72 |||||||||||| ||||||||||| Sbjct: 153 atggggaagacgaaggccatttat 176
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ttctggcttcttgacttctc 237 |||||||||||||||||||| Sbjct: 44748 ttctggcttcttgacttctc 44729
>gb|AY581895.1| Zea mays sucrose transporter 2 (SUT2) mRNA, complete cds Length = 2166 Score = 40.1 bits (20), Expect = 6.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 380 tggcacaagtggtttcccttcctccggacaagggcttgctgtgaagcctgcg 431 ||||||||||||||||| || || |||||| || ||||||||||| |||| Sbjct: 723 tggcacaagtggtttccatttctaacgacaagagcatgctgtgaagcttgcg 774 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 239 aacaacactgtgcaaggtccagcgcgtgctct 270 ||||| || ||||||||||| ||||||||||| Sbjct: 582 aacaatacagtgcaaggtcctgcgcgtgctct 613
>gb|AC121788.3| Mus musculus BAC clone RP23-395N2 from chromosome 10, complete sequence Length = 196144 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 caaattcaatcttctgttct 328 |||||||||||||||||||| Sbjct: 20239 caaattcaatcttctgttct 20220
>gb|AC141639.3| Mus musculus BAC clone RP23-354J7 from chromosome 18, complete sequence Length = 216358 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 aattcaatcttctgttcttg 330 |||||||||||||||||||| Sbjct: 41055 aattcaatcttctgttcttg 41074
>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6, complete sequence Length = 101890 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 ctggtggcagtgctgttcctgtcc 475 |||||||||||||| ||||||||| Sbjct: 58912 ctggtggcagtgctcttcctgtcc 58889
>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence Length = 178649 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ttggatggcactaggaaatatcct 351 |||||||| ||||||||||||||| Sbjct: 111907 ttggatggaactaggaaatatcct 111930
>gb|AC119733.2| Homo sapiens 3 RP11-159G9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154803 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gttcctgtccttagctttgg 485 |||||||||||||||||||| Sbjct: 35001 gttcctgtccttagctttgg 34982
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 agcaaggaagagtgcagtctctat 175 |||||||||||||||||| ||||| Sbjct: 145013 agcaaggaagagtgcagtgtctat 144990
>gb|AC166259.3| Mus musculus BAC RP23-360A24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198972 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 tgcaattgtgtatgttcttg 215 |||||||||||||||||||| Sbjct: 47865 tgcaattgtgtatgttcttg 47884
>gb|AC183102.3| Pan troglodytes BAC clone CH251-717M1 from chromosome 3, complete sequence Length = 172268 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tcctgtccttagctttggtg 487 |||||||||||||||||||| Sbjct: 16774 tcctgtccttagctttggtg 16755
>gb|AC017100.4| Homo sapiens BAC clone RP11-549B18 from 18, complete sequence Length = 202950 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 taactggcacaagtggtttc 395 |||||||||||||||||||| Sbjct: 87296 taactggcacaagtggtttc 87277
>gb|AC146160.3| Pan troglodytes BAC clone RP43-1E22 from chromosome 7, complete sequence Length = 182457 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcctgtccttagctttggtg 487 |||||||||||||||||||| Sbjct: 23876 tcctgtccttagctttggtg 23895
>gb|AC153520.3| Mus musculus 10 BAC RP23-144O19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207519 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 tgcaattgtgtatgttcttg 215 |||||||||||||||||||| Sbjct: 77597 tgcaattgtgtatgttcttg 77578
>dbj|AB091674.1| Oryza sativa (japonica cultivar-group) OsSUT5 mRNA for sucrose transporter, complete cds Length = 1972 Score = 40.1 bits (20), Expect = 6.8 Identities = 56/68 (82%) Strand = Plus / Plus Query: 213 ttggattctggcttcttgacttctccaacaacactgtgcaaggtccagcgcgtgctctga 272 |||| |||||| | ||||||||| | ||||||||||| || || || || ||||| ||| Sbjct: 526 ttggcttctggttccttgacttcgctaacaacactgtccaggggccggctcgtgccatga 585 Query: 273 tggctgat 280 |||||||| Sbjct: 586 tggctgat 593
>emb|AL157391.11| Human DNA sequence from clone RP11-271M1 on chromosome 10 Contains an olfactory receptor pseudogene, a seven transmembrane receptor (Rhodopsin family) pseudogene, a pseudogene simlar to part of DNA cross-link repair 1C (PSO2 homolog, S.cerevisiae) (DCLRE1C)(SCIDA, SNM1C, ARTEMIS, RS-SCID,DCLREC1C, FLJ11360), the 5' end of the gene for a novel thioesterase domain containing protein (FLJ11106) and a CpG island, complete sequence Length = 47177 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 tcctgtccttagctttggtg 487 |||||||||||||||||||| Sbjct: 8111 tcctgtccttagctttggtg 8130
>emb|AL844891.7| Mouse DNA sequence from clone RP23-350N21 on chromosome 2, complete sequence Length = 138602 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 tggatggcactaggaaatatccta 352 ||||||| |||||||||||||||| Sbjct: 76324 tggatggaactaggaaatatccta 76301
>emb|AL627074.11| Mouse DNA sequence from clone RP23-465A17 on chromosome 3, complete sequence Length = 177133 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ttggatggcactaggaaatatcct 351 |||||||| ||||||||||||||| Sbjct: 84865 ttggatggaactaggaaatatcct 84888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,358,726 Number of Sequences: 3902068 Number of extensions: 4358726 Number of successful extensions: 77764 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77549 Number of HSP's gapped (non-prelim): 208 length of query: 503 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 481 effective length of database: 17,147,199,772 effective search space: 8247803090332 effective search space used: 8247803090332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)