ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf100a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9UHL4:DPP2_HUMAN Dipeptidyl-peptidase 2 precursor - Homo sapien... 36 0.17
2Q3UH66:WNK2_MOUSE Serine/threonine-protein kinase WNK2 - Mus mus... 32 2.5
3Q61602:GLI3_MOUSE Zinc finger protein GLI3 - Mus musculus (Mouse) 32 2.5
4Q9WTR8:PHLPP_RAT PH domain leucine-rich repeat protein phosphata... 32 3.3
5Q8KBP9:FER3_CHLTE Ferredoxin-3 - Chlorobium tepidum 32 4.3
6Q9Z0G4:WISP2_MOUSE WNT1-inducible-signaling pathway protein 2 pr... 32 4.3
7Q5E9W5:G3ST4_BOVIN Galactose-3-O-sulfotransferase 4 - Bos taurus... 32 4.3
8P29353:SHC1_HUMAN SHC-transforming protein 1 - Homo sapiens (Human) 31 5.6
9P43662:LPFC_SALTY Outer membrane usher protein lpfC precursor - ... 31 5.6
10Q07441:ITB5_PAPCY Integrin beta-5 - Papio cynocephalus (Yellow b... 31 5.6
11Q9ULW5:RAB26_HUMAN Ras-related protein Rab-26 - Homo sapiens (Hu... 31 5.6
12Q8BZ05:CEND1_MOUSE Centaurin-delta 1 - Mus musculus (Mouse) 28 7.1
13P03204:EBNA6_EBV Epstein-Barr nuclear antigen 6 - Epstein-Barr v... 31 7.3
14Q15334:L2GL1_HUMAN Lethal(2) giant larvae protein homolog 1 - Ho... 30 9.5
15Q9WVK5:B4GT6_MOUSE Beta-1,4-galactosyltransferase 6 - Mus muscul... 30 9.5

>Q9UHL4:DPP2_HUMAN Dipeptidyl-peptidase 2 precursor - Homo sapiens (Human)|
          Length = 492
 Score = 36.2 bits (82), Expect = 0.17
 Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
 Frame = -3

Query: 676 ITGLSAMS---YSSGNA*TSLSLPPAYSS--NPQGCGLQCRGGPPEEFLDHSSFIEVN-- 518
           ITGL A++   Y++  +     +   Y S  +P GCG     GP     D+ +  E+N  
Sbjct: 303 ITGLRALAGLVYNASGSEHCYDIYRLYHSCADPTGCGT----GPDARAWDYQACTEINLT 358

Query: 517 -----------DRTVGHELRF-----SARIWPLPYRMHRTFWFAARATAVDPSLVFLRHT 386
                      D     ELR      +  +WP P  +  +FW      A   +++F    
Sbjct: 359 FASNNVTDMFPDLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGGDLRAA--SNIIFSNGN 416

Query: 385 GDTMSGGGVR---SSAEARVDVSGGTGLASLRAT---ENGSTVSARARA*TI 248
            D  +GGG+R   S++   V + GG     LRA+   +  S V AR    TI
Sbjct: 417 LDPWAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATI 468



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>Q3UH66:WNK2_MOUSE Serine/threonine-protein kinase WNK2 - Mus musculus (Mouse)|
          Length = 2149

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 31/104 (29%), Positives = 47/104 (45%)
 Frame = -1

Query: 372 LAEASARRPRHAWTSAVGPASPPCAPLKMVALSRPGPEHERSAT***YVEVTPSIPSAGE 193
           +AE +  RP     +A  PA+P   P      S PGP  ER+ T     + T +  +A +
Sbjct: 85  IAERARGRP-----AAPAPAAPAAPPGSPSVPSDPGP--ERAGTQEPSPDPTTASAAATQ 137

Query: 192 VPVGGP*QKPCHWTTLLARKASSTTTVMRKVGPSIADRPLQSGD 61
           VP GGP Q+     T   ++ + TT    + G +  D P +  D
Sbjct: 138 VPDGGPRQEEAPAPT---QEDAGTTEAKPEPGRARKDEPEEEED 178



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>Q61602:GLI3_MOUSE Zinc finger protein GLI3 - Mus musculus (Mouse)|
          Length = 1596

 Score = 32.3 bits (72), Expect = 2.5
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = -1

Query: 471 PCPIECTGHFGLQHAQP----PLIRPSSFSGTPAIPCLAEASARRPRHAWTSAVGPASPP 304
           P PI+   H G  H  P    PL  PS+ S +P  P L        R+   ++  P SPP
Sbjct: 134 PVPIDARHHEGRYHYDPSPIPPLHVPSALSSSPTYPDLPFIRISPHRNPTAASESPFSPP 193



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>Q9WTR8:PHLPP_RAT PH domain leucine-rich repeat protein phosphatase - Rattus|
           norvegicus (Rat)
          Length = 1696

 Score = 32.0 bits (71), Expect = 3.3
 Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
 Frame = -1

Query: 438 LQHAQPPLIRPSSFSGTPAIPCLAEASARRPRHAWTSAV-GPASPPCAPLKMVALSRPGP 262
           L H  PP   P++   TPA   L       P  +   AV GPA  P A L +     PG 
Sbjct: 222 LGHGPPPAAAPAASDQTPATE-LGRDVEPPPSSSTVGAVRGPARAPPADLPL-----PGG 275

Query: 261 EHERSAT***YVEVTPSIPSAGEVPVGGP*QKPCHWTTLLARKASSTTTV-MRKVGPSIA 85
              R A     V   PS  S GE+  GG    PC   +   R AS T +  +     S++
Sbjct: 276 AWTRCAP---RVNPAPSDSSPGELFAGG----PCS-PSRAPRPASDTESFSLSPSAESVS 327

Query: 84  DR--PLQSGDSGCFAS 43
           DR  P  SG     +S
Sbjct: 328 DRLDPYSSGGGSSSSS 343



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>Q8KBP9:FER3_CHLTE Ferredoxin-3 - Chlorobium tepidum|
          Length = 62

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = +2

Query: 425 CACCKPKCPVHSIGQG-------PNACAEAQLMANCP 514
           CA C+P+CPV++I  G        +AC E +  A+ P
Sbjct: 12  CAACEPECPVNAISAGSDIYVIDESACTECEGYADSP 48



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>Q9Z0G4:WISP2_MOUSE WNT1-inducible-signaling pathway protein 2 precursor - Mus musculus|
           (Mouse)
          Length = 251

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 435 QHAQPPLIRPSSFSGTPAIPCLAEASARRPRHAWTSAVGPASPPC 301
           Q    P I+PSS  G      +  ASA  P   W++A GP S  C
Sbjct: 165 QAVMQPAIQPSSAQGHQLSALVTPASADGPCPNWSTAWGPCSTTC 209



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>Q5E9W5:G3ST4_BOVIN Galactose-3-O-sulfotransferase 4 - Bos taurus (Bovine)|
          Length = 483

 Score = 31.6 bits (70), Expect = 4.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 345 RHAWTSAVGPASPPCAP 295
           RH+W S++GPA+P C P
Sbjct: 49  RHSWASSLGPAAPSCPP 65



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>P29353:SHC1_HUMAN SHC-transforming protein 1 - Homo sapiens (Human)|
          Length = 583

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = +2

Query: 2   SLAMGVHPGLRPQLLAKQPESPDCNGRSAIDGPTFLITVVVDDAFRARSVVQWHGFCQGP 181
           +L +G   G  P++  + P  P C GR   D P++   V V +  +AR  V   G     
Sbjct: 393 TLPVGQPVGGDPEVRKQMPPPPPCPGRELFDDPSY---VNVQNLDKARQAVGGAGPPNPA 449

Query: 182 PTGTSPADGID 214
             G++P D  D
Sbjct: 450 INGSAPRDLFD 460



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>P43662:LPFC_SALTY Outer membrane usher protein lpfC precursor - Salmonella|
           typhimurium
          Length = 842

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
 Frame = -3

Query: 364 GVRSSAEARVDVSGGTGLASLRATEN--GSTVSARARA*TISHIVVVRGGHAVDTVRR*G 191
           GV +S    +D  GG G ASL    N  G  V+   R   I+H   +             
Sbjct: 623 GVGNSGSVNLDYQGGVGSASLGYNYNRDGQQVNYGLRGGVIAHSEGI------------- 669

Query: 190 ASRRPLTEAVPLDDAPGAES--VVDHDGDEEGW 98
              +PL E++ +  APGA    V+++ G E  W
Sbjct: 670 TLSQPLGESMAIISAPGARGAHVINNGGVEVDW 702



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>Q07441:ITB5_PAPCY Integrin beta-5 - Papio cynocephalus (Yellow baboon)|
          Length = 655

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 11/100 (11%)
 Frame = +2

Query: 257 CSGPGR---DSATIFSGAQGGEAGPTADVHACLGRRADASARHGIAGVPEKDEGRINGGC 427
           CSG G          +G  G     + D+  C GR     +  G           + G C
Sbjct: 419 CSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHC---------LCGQC 469

Query: 428 ACCKP--------KCPVHSIGQGPNACAEAQLMANCPVIH 523
            C +P        KCP       P+AC+  +    CP++H
Sbjct: 470 QCTEPGAFGEMCEKCPTC-----PDACSTKRDCVECPLLH 504



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>Q9ULW5:RAB26_HUMAN Ras-related protein Rab-26 - Homo sapiens (Human)|
          Length = 256

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -1

Query: 405 SSFSGTPAIPCLAEASARRPRHAWTSAVGPASPPCAPLK 289
           S  + TPA   L  A+  RP  + T+  GP +PP  PL+
Sbjct: 9   SKGASTPAASTLPTANGARPARSGTALSGPDAPPNGPLQ 47



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>Q8BZ05:CEND1_MOUSE Centaurin-delta 1 - Mus musculus (Mouse)|
          Length = 1703

 Score = 28.5 bits (62), Expect(2) = 7.1
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +3

Query: 186 LAPHRRTVSTA*PPRTTTMWLIVHALALAETVLPFSVARKEARPVPPLTSTRASADERTP 365
           + P+R    TA   R    W+     ++AET+  + VA K    +    S R+ AD + P
Sbjct: 649 ITPYRSFSFTADSEREKQEWIEAVQQSIAETLSDYEVAEK----IWFNESNRSCADCKAP 704

Query: 366 PPDMVS 383
            PD  S
Sbjct: 705 DPDWAS 710



 Score = 20.8 bits (42), Expect(2) = 7.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 382 RRCAGERRGTDQRRLRVLQTKMSCAFY 462
           ++CAG+ R    +  +V   KM  + +
Sbjct: 719 KKCAGQHRSLGPKDCKVRSLKMDASIW 745



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>P03204:EBNA6_EBV Epstein-Barr nuclear antigen 6 - Epstein-Barr virus (strain B95-8)|
           (HHV-4) (Human herpesvirus 4)
          Length = 992

 Score = 30.8 bits (68), Expect = 7.3
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -1

Query: 435 QHAQPPLIRPSSFSGTPAI-PCLAEASARRPRHAWTSAVGP--ASPPCAPLKMVALSRPG 265
           + A PP + PS  +G PA+ P  A   A  P  A   A GP  A PP A  +++A    G
Sbjct: 547 KRAAPPTVSPSD-TGPPAVGPPAAGPPAAGPPAAGPPAAGPPAAGPPAAGPRILAPLSAG 605

Query: 264 P 262
           P
Sbjct: 606 P 606



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>Q15334:L2GL1_HUMAN Lethal(2) giant larvae protein homolog 1 - Homo sapiens (Human)|
          Length = 1062

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
 Frame = +2

Query: 194 SPADGIDGVTSTYYY---YVADRSCSGP----GRDSATIFS-------GAQGGEAGPTAD 331
           S  D + GV    Y+   ++ D +  GP    G +S ++F+        A GGE  P   
Sbjct: 715 SADDSLSGVVRCLYFADTFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQA 774

Query: 332 VHACLGRRADASARHGIAGVPEKDEGR 412
           V A LG+      R  +  +   D GR
Sbjct: 775 VEAVLGKELQLMHRAPVVAIAVLDGGR 801



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>Q9WVK5:B4GT6_MOUSE Beta-1,4-galactosyltransferase 6 - Mus musculus (Mouse)|
          Length = 382

 Score = 30.4 bits (67), Expect = 9.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 513 LSFTSMKEEWSRNSSGGPPRHWRPQPC 593
           +SF  + + +S++S  GP  HWRP+ C
Sbjct: 126 ISFDEVHQLFSKDSEIGPGGHWRPKDC 152


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 165,733,454
Number of extensions: 3992151
Number of successful extensions: 12317
Number of sequences better than 10.0: 15
Number of HSP's gapped: 12297
Number of HSP's successfully gapped: 16
Length of query: 288
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 176
Effective length of database: 69,965,399
Effective search space: 12313910224
Effective search space used: 12313910224
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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