Clone Name | FLbaf100a05 |
---|---|
Clone Library Name | barley_pub |
>Q6GL52:ZN574_XENTR Zinc finger protein 574 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 857 Score = 35.8 bits (81), Expect = 0.43 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +1 Query: 544 PRTSLVGGAGM-LPCSDCDEVFVKAESLELHRSTH 645 PR L GG G L CSDC + F SL++HR H Sbjct: 669 PRNKLKGGGGKNLECSDCHKTFSTETSLQVHRRIH 703
>Q16587:ZNF74_HUMAN Zinc finger protein 74 - Homo sapiens (Human)| Length = 643 Score = 35.4 bits (80), Expect = 0.56 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 511 GCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645 G + CHS L + G CSDC++ F L LH+ TH Sbjct: 393 GKAFTCHSSLTVHEKIHSGDKPFKCSDCEKAFNSRSRLTLHQRTH 437
>P18714:ZG20_XENLA Gastrula zinc finger protein XFG20-1 - Xenopus laevis (African| clawed frog) Length = 675 Score = 34.3 bits (77), Expect = 1.2 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 577 LPCSDCDEVFVKAESLELHRSTHHAVS-ELGAEDTSRN 687 LPC++C E+F L H+STH + S E G + T N Sbjct: 373 LPCTECGEIFSDEHELLTHQSTHTSPSTEFGVQTTEDN 410 Score = 32.7 bits (73), Expect = 3.6 Identities = 13/52 (25%), Positives = 25/52 (48%) Frame = +1 Query: 490 RSFRKLSGCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645 R + + + H++L +++ PC++C E+F L H+STH Sbjct: 228 RPLSEFGKTFSDAHNLLKHQSTFTEEQKPFPCTECGEIFSNEHELLTHQSTH 279 Score = 32.0 bits (71), Expect = 6.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +1 Query: 580 PCSDCDEVFVKAESLELHRSTH 645 PC++CD+ F K E LE H H Sbjct: 508 PCTECDKTFTKKEQLESHYKVH 529
>Q6ECI4:ZN470_HUMAN Zinc finger protein 470 - Homo sapiens (Human)| Length = 717 Score = 33.5 bits (75), Expect = 2.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 529 HSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645 HSV+ G +L C+DC+++F K +L LH+ H Sbjct: 212 HSVVKKHKQDRGEKKLLKCNDCEKIFSKISTLTLHQRIH 250
>P10076:ZFP26_MOUSE Zinc finger protein 26 - Mus musculus (Mouse)| Length = 861 Score = 33.5 bits (75), Expect = 2.1 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Frame = +1 Query: 520 YECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH 645 Y+C L +SLVG G C+ CD+ F ++ L +H TH Sbjct: 529 YQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTH 576
>Q5F334:LRC59_CHICK Leucine-rich repeat-containing protein 59 - Gallus gallus (Chicken)| Length = 339 Score = 33.5 bits (75), Expect = 2.1 Identities = 23/61 (37%), Positives = 29/61 (47%) Frame = -3 Query: 837 RSRLDALPVLLEPLHGLAGAVHLQNHLDPANRRRPRLPDEPARLEDNLHHVPARVLGAKL 658 ++RL LPV L L HLD N R LP A+L+ +LHH P +L L Sbjct: 71 KNRLQQLPVDFGRLVSL-------QHLDLLNNRLVTLPVSFAQLKLSLHHSPVEILSRLL 123 Query: 657 G 655 G Sbjct: 124 G 124
>P18739:ZO10_XENLA Oocyte zinc finger protein XLCOF10 - Xenopus laevis (African clawed| frog) Length = 214 Score = 33.1 bits (74), Expect = 2.8 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +1 Query: 583 CSDCDEVFVKAESLELHRSTH 645 CS CDE FV+ LELHR H Sbjct: 3 CSQCDESFVQRSELELHRQLH 23
>Q99PJ7:ZN689_RAT Zinc finger protein 689 - Rattus norvegicus (Rat)| Length = 500 Score = 33.1 bits (74), Expect = 2.8 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = +1 Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666 PC DC F ++ SL +HRSTH HA + G Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407
>Q8BKK5:ZN689_MOUSE Zinc finger protein 689 - Mus musculus (Mouse)| Length = 500 Score = 33.1 bits (74), Expect = 2.8 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = +1 Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666 PC DC F ++ SL +HRSTH HA + G Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407
>Q96CS4:ZN689_HUMAN Zinc finger protein 689 - Homo sapiens (Human)| Length = 500 Score = 33.1 bits (74), Expect = 2.8 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%) Frame = +1 Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666 PC DC F ++ SL +HRSTH HA + G Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407
>Q9Z1D7:ZSC12_MOUSE Zinc finger and SCAN domain-containing protein 12 - Mus musculus| (Mouse) Length = 501 Score = 32.7 bits (73), Expect = 3.6 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 532 SVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHH 648 S L + GA C+DC + FV SL H+ THH Sbjct: 394 STLSQHQGVHTGAKPYECNDCGKAFVYNSSLATHQETHH 432
>Q9UEG4:ZN629_HUMAN Zinc finger protein 629 - Homo sapiens (Human)| Length = 869 Score = 32.7 bits (73), Expect = 3.6 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%) Frame = +1 Query: 583 CSDCDEVFVKAESLELHRSTHHAVSELGAEDTSRNVVEIIFQSSWLVGKPRAAPICR--- 753 CS C E F+ L H+ TH D + E S +L GKP P C+ Sbjct: 664 CSHCGESFLDRSVLLQHQLTHGNEKPFLFPDYRIGLGEGAGPSPFLSGKPFKCPECKQSF 723 Query: 754 ---IEMIL--KVHSSGKTVER 801 E++L KVH+ GK+ ++ Sbjct: 724 GLSSELLLHQKVHAGGKSSQK 744
>Q9NSD4:ZN275_HUMAN Zinc finger protein 275 - Homo sapiens (Human)| Length = 458 Score = 32.7 bits (73), Expect = 3.6 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 490 RSFRKLSGCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHH 648 ++FR+ SG L + GA CS C VF + +L+ H+ THH Sbjct: 413 KAFRRSSG--------LSRHRRIHSGARRCECSQCGRVFKRRSALQKHQPTHH 457
>P52741:ZN134_HUMAN Zinc finger protein 134 - Homo sapiens (Human)| Length = 348 Score = 32.7 bits (73), Expect = 3.6 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = +1 Query: 511 GCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSRN 687 G Y+ HS L + GA CSDC +VF +L H S H + D ++ Sbjct: 187 GKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKS 245
>P38621:ZN12_MICSA Zinc finger protein ZFMSA12A - Micropterus salmoides (Largemouth| bass) Length = 415 Score = 32.3 bits (72), Expect = 4.7 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 Query: 583 CSDCDEVFVKAESLELHRSTH 645 CSDC + F+ A L++HR TH Sbjct: 303 CSDCGKAFISAGELQIHRRTH 323
>Q8BXJ2:TREF1_MOUSE Transcriptional-regulating factor 1 - Mus musculus (Mouse)| Length = 1205 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +1 Query: 574 MLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSR-----NVVEIIFQSSWLVGKPRA 738 + PC +C +VF K +S H TH E + + + I +++ VG P Sbjct: 1091 IFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPEL 1150 Query: 739 APICRIEMILKV 774 P+ ++ ++ V Sbjct: 1151 LPLDQLSLMKPV 1162
>Q96PN7:TREF1_HUMAN Transcriptional-regulating factor 1 - Homo sapiens (Human)| Length = 1200 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +1 Query: 574 MLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSR-----NVVEIIFQSSWLVGKPRA 738 + PC +C +VF K +S H TH E + + + I +++ VG P Sbjct: 1085 IFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPGL 1144 Query: 739 APICRIEMI 765 P+ ++ +I Sbjct: 1145 LPLDQLSLI 1153
>P60371:KR106_HUMAN Keratin-associated protein 10-6 - Homo sapiens (Human)| Length = 365 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -2 Query: 919 CSGTAGSRCRRRRTVGNSSWPAHRCCSPQSP*RAPCTARTSPRSCR--SCAPS 767 CSG + S C++ V S P + SP ++ CT+ +P C+ SC P+ Sbjct: 165 CSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPT 217
>P18753:ZO84_XENLA Oocyte zinc finger protein XLCOF8.4 - Xenopus laevis (African| clawed frog) Length = 780 Score = 32.0 bits (71), Expect = 6.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 529 HSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHHAV 654 H L S+ G PCS+C + F + L +HR TH V Sbjct: 234 HINLHNDLSIHAGKKPFPCSECGKCFAGSSELNVHRRTHTRV 275
>P18751:ZO71_XENLA Oocyte zinc finger protein XLCOF7.1 - Xenopus laevis (African clawed| frog) Length = 898 Score = 32.0 bits (71), Expect = 6.2 Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 13/167 (7%) Frame = +1 Query: 523 ECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH-----HAVSELGA 669 EC ++SLV G CS CD+ F + L +H+ TH + SE G Sbjct: 655 ECGKCYSKKSSLVHHQRTHTGEKPFSCSKCDKCFASSSELNIHQRTHTGEKAFSCSECGK 714 Query: 670 EDTSRNVVEIIFQSSWLVGKPRAAPICRIEMILKVHSSGKTVERFEQYRERVKATAASST 849 T+R+ + Q KP + P C + SS + +Q VK + Sbjct: 715 CFTNRSQLS-RHQMIHTGEKPISCPECEECFV----SSSQLTAHQQQAHRMVKPFSCLEC 769 Query: 850 DEL--ARRSFPRCAADGNEILRFHCTTFTCSLGLAGATSLCRSSPQH 984 + R +F R F C+ C G + +SL R H Sbjct: 770 GKCFSNRSNFARHQMIHTGEKPFSCS--ECRKGFSNQSSLARHQMTH 814
>Q9Y473:ZN175_HUMAN Zinc finger protein 175 - Homo sapiens (Human)| Length = 711 Score = 32.0 bits (71), Expect = 6.2 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 14/74 (18%) Frame = +1 Query: 520 YECH---------SVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHR-----STHHAVS 657 Y+CH S LD + G CSDC + F + L +H+ HH S Sbjct: 475 YQCHNCGKSFISKSQLDIHHRIHTGEKPYECSDCGKTFTQKSHLNIHQKIHTGERHHVCS 534 Query: 658 ELGAEDTSRNVVEI 699 E G ++++ + Sbjct: 535 ECGKAFNQKSILSM 548
>Q22258:ATR_CAEEL Serine/threonine-protein kinase ATR - Caenorhabditis elegans| Length = 2531 Score = 32.0 bits (71), Expect = 6.2 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 812 YCS-NLSTVLPELCTFRIISILQIGAARGFPTSQLDWKIISTTF 684 YC S+ LP+L T I S + +GA+ GF L W IIST F Sbjct: 138 YCDVEPSSSLPQLITPEIASAISLGAS-GFFRYHLKWNIISTLF 180
>P08045:XFIN_XENLA Zinc finger protein Xfin - Xenopus laevis (African clawed frog)| Length = 1350 Score = 31.6 bits (70), Expect = 8.1 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%) Frame = +1 Query: 523 ECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH-----HAVSELGA 669 ECH ++ LV G CS CD+ F + +L H+ TH + S+ G Sbjct: 386 ECHKGFIQKSDLVKHLRTHTGEKPFKCSHCDKKFTERSALAKHQRTHTGEKPYKCSDCGK 445 Query: 670 EDTSRNVVEIIFQSSWLVGKPRAAPIC 750 E T R+ + I+ Q +P +C Sbjct: 446 EFTQRSNL-ILHQRIHTGERPYKCTLC 471
>Q9QZZ4:MYO15_MOUSE Myosin-XV - Mus musculus (Mouse)| Length = 3511 Score = 31.6 bits (70), Expect = 8.1 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -1 Query: 779 LCTFRIISILQIGAARGFPTSQLDWKII---STTFLLVSSAPSSETAWWVDLWSSRDS 615 +C R++ + GAAR FP +QL+W I ++ L VS + + V WS+ ++ Sbjct: 2167 VCQHRLLQAMGSGAARTFPPTQLEWTAIQEKASMALDVSCFNGDQFSCPVHTWSTGEA 2224 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 189,580,744 Number of extensions: 3576648 Number of successful extensions: 13558 Number of sequences better than 10.0: 24 Number of HSP's gapped: 13511 Number of HSP's successfully gapped: 26 Length of query: 456 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 339 Effective length of database: 68,593,924 Effective search space: 23253340236 Effective search space used: 23253340236 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)