ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf100a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6GL52:ZN574_XENTR Zinc finger protein 574 - Xenopus tropicalis ... 36 0.43
2Q16587:ZNF74_HUMAN Zinc finger protein 74 - Homo sapiens (Human) 35 0.56
3P18714:ZG20_XENLA Gastrula zinc finger protein XFG20-1 - Xenopus... 34 1.2
4Q6ECI4:ZN470_HUMAN Zinc finger protein 470 - Homo sapiens (Human) 33 2.1
5P10076:ZFP26_MOUSE Zinc finger protein 26 - Mus musculus (Mouse) 33 2.1
6Q5F334:LRC59_CHICK Leucine-rich repeat-containing protein 59 - G... 33 2.1
7P18739:ZO10_XENLA Oocyte zinc finger protein XLCOF10 - Xenopus l... 33 2.8
8Q99PJ7:ZN689_RAT Zinc finger protein 689 - Rattus norvegicus (Rat) 33 2.8
9Q8BKK5:ZN689_MOUSE Zinc finger protein 689 - Mus musculus (Mouse) 33 2.8
10Q96CS4:ZN689_HUMAN Zinc finger protein 689 - Homo sapiens (Human) 33 2.8
11Q9Z1D7:ZSC12_MOUSE Zinc finger and SCAN domain-containing protei... 33 3.6
12Q9UEG4:ZN629_HUMAN Zinc finger protein 629 - Homo sapiens (Human) 33 3.6
13Q9NSD4:ZN275_HUMAN Zinc finger protein 275 - Homo sapiens (Human) 33 3.6
14P52741:ZN134_HUMAN Zinc finger protein 134 - Homo sapiens (Human) 33 3.6
15P38621:ZN12_MICSA Zinc finger protein ZFMSA12A - Micropterus sal... 32 4.7
16Q8BXJ2:TREF1_MOUSE Transcriptional-regulating factor 1 - Mus mus... 32 4.7
17Q96PN7:TREF1_HUMAN Transcriptional-regulating factor 1 - Homo sa... 32 4.7
18P60371:KR106_HUMAN Keratin-associated protein 10-6 - Homo sapien... 32 4.7
19P18753:ZO84_XENLA Oocyte zinc finger protein XLCOF8.4 - Xenopus ... 32 6.2
20P18751:ZO71_XENLA Oocyte zinc finger protein XLCOF7.1 - Xenopus ... 32 6.2
21Q9Y473:ZN175_HUMAN Zinc finger protein 175 - Homo sapiens (Human) 32 6.2
22Q22258:ATR_CAEEL Serine/threonine-protein kinase ATR - Caenorhab... 32 6.2
23P08045:XFIN_XENLA Zinc finger protein Xfin - Xenopus laevis (Afr... 32 8.1
24Q9QZZ4:MYO15_MOUSE Myosin-XV - Mus musculus (Mouse) 32 8.1

>Q6GL52:ZN574_XENTR Zinc finger protein 574 - Xenopus tropicalis (Western clawed frog)|
           (Silurana tropicalis)
          Length = 857
 Score = 35.8 bits (81), Expect = 0.43
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 544 PRTSLVGGAGM-LPCSDCDEVFVKAESLELHRSTH 645
           PR  L GG G  L CSDC + F    SL++HR  H
Sbjct: 669 PRNKLKGGGGKNLECSDCHKTFSTETSLQVHRRIH 703



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>Q16587:ZNF74_HUMAN Zinc finger protein 74 - Homo sapiens (Human)|
          Length = 643

 Score = 35.4 bits (80), Expect = 0.56
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 511 GCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645
           G  + CHS L     +  G     CSDC++ F     L LH+ TH
Sbjct: 393 GKAFTCHSSLTVHEKIHSGDKPFKCSDCEKAFNSRSRLTLHQRTH 437



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>P18714:ZG20_XENLA Gastrula zinc finger protein XFG20-1 - Xenopus laevis (African|
           clawed frog)
          Length = 675

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 577 LPCSDCDEVFVKAESLELHRSTHHAVS-ELGAEDTSRN 687
           LPC++C E+F     L  H+STH + S E G + T  N
Sbjct: 373 LPCTECGEIFSDEHELLTHQSTHTSPSTEFGVQTTEDN 410



 Score = 32.7 bits (73), Expect = 3.6
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 490 RSFRKLSGCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645
           R   +    + + H++L  +++        PC++C E+F     L  H+STH
Sbjct: 228 RPLSEFGKTFSDAHNLLKHQSTFTEEQKPFPCTECGEIFSNEHELLTHQSTH 279



 Score = 32.0 bits (71), Expect = 6.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 580 PCSDCDEVFVKAESLELHRSTH 645
           PC++CD+ F K E LE H   H
Sbjct: 508 PCTECDKTFTKKEQLESHYKVH 529



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>Q6ECI4:ZN470_HUMAN Zinc finger protein 470 - Homo sapiens (Human)|
          Length = 717

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 529 HSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTH 645
           HSV+       G   +L C+DC+++F K  +L LH+  H
Sbjct: 212 HSVVKKHKQDRGEKKLLKCNDCEKIFSKISTLTLHQRIH 250



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>P10076:ZFP26_MOUSE Zinc finger protein 26 - Mus musculus (Mouse)|
          Length = 861

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = +1

Query: 520 YECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH 645
           Y+C   L   +SLVG      G     C+ CD+ F ++  L +H  TH
Sbjct: 529 YQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTH 576



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>Q5F334:LRC59_CHICK Leucine-rich repeat-containing protein 59 - Gallus gallus (Chicken)|
          Length = 339

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 23/61 (37%), Positives = 29/61 (47%)
 Frame = -3

Query: 837 RSRLDALPVLLEPLHGLAGAVHLQNHLDPANRRRPRLPDEPARLEDNLHHVPARVLGAKL 658
           ++RL  LPV    L  L        HLD  N R   LP   A+L+ +LHH P  +L   L
Sbjct: 71  KNRLQQLPVDFGRLVSL-------QHLDLLNNRLVTLPVSFAQLKLSLHHSPVEILSRLL 123

Query: 657 G 655
           G
Sbjct: 124 G 124



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>P18739:ZO10_XENLA Oocyte zinc finger protein XLCOF10 - Xenopus laevis (African clawed|
           frog)
          Length = 214

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 583 CSDCDEVFVKAESLELHRSTH 645
           CS CDE FV+   LELHR  H
Sbjct: 3   CSQCDESFVQRSELELHRQLH 23



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>Q99PJ7:ZN689_RAT Zinc finger protein 689 - Rattus norvegicus (Rat)|
          Length = 500

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
 Frame = +1

Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666
           PC DC   F ++ SL +HRSTH     HA  + G
Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407



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>Q8BKK5:ZN689_MOUSE Zinc finger protein 689 - Mus musculus (Mouse)|
          Length = 500

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
 Frame = +1

Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666
           PC DC   F ++ SL +HRSTH     HA  + G
Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407



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>Q96CS4:ZN689_HUMAN Zinc finger protein 689 - Homo sapiens (Human)|
          Length = 500

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
 Frame = +1

Query: 580 PCSDCDEVFVKAESLELHRSTH-----HAVSELG 666
           PC DC   F ++ SL +HRSTH     HA  + G
Sbjct: 374 PCPDCGRAFRRSGSLAIHRSTHTEEKLHACDDCG 407



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>Q9Z1D7:ZSC12_MOUSE Zinc finger and SCAN domain-containing protein 12 - Mus musculus|
           (Mouse)
          Length = 501

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 532 SVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHH 648
           S L     +  GA    C+DC + FV   SL  H+ THH
Sbjct: 394 STLSQHQGVHTGAKPYECNDCGKAFVYNSSLATHQETHH 432



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>Q9UEG4:ZN629_HUMAN Zinc finger protein 629 - Homo sapiens (Human)|
          Length = 869

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
 Frame = +1

Query: 583 CSDCDEVFVKAESLELHRSTHHAVSELGAEDTSRNVVEIIFQSSWLVGKPRAAPICR--- 753
           CS C E F+    L  H+ TH         D    + E    S +L GKP   P C+   
Sbjct: 664 CSHCGESFLDRSVLLQHQLTHGNEKPFLFPDYRIGLGEGAGPSPFLSGKPFKCPECKQSF 723

Query: 754 ---IEMIL--KVHSSGKTVER 801
               E++L  KVH+ GK+ ++
Sbjct: 724 GLSSELLLHQKVHAGGKSSQK 744



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>Q9NSD4:ZN275_HUMAN Zinc finger protein 275 - Homo sapiens (Human)|
          Length = 458

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +1

Query: 490 RSFRKLSGCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHH 648
           ++FR+ SG        L     +  GA    CS C  VF +  +L+ H+ THH
Sbjct: 413 KAFRRSSG--------LSRHRRIHSGARRCECSQCGRVFKRRSALQKHQPTHH 457



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>P52741:ZN134_HUMAN Zinc finger protein 134 - Homo sapiens (Human)|
          Length = 348

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = +1

Query: 511 GCYYECHSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSRN 687
           G Y+  HS L     +  GA    CSDC +VF    +L  H S H   +     D  ++
Sbjct: 187 GKYFSHHSNLIVHQRVHNGARPYKCSDCGKVFRHKSTLVQHESIHTGENPYDCSDCGKS 245



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>P38621:ZN12_MICSA Zinc finger protein ZFMSA12A - Micropterus salmoides (Largemouth|
           bass)
          Length = 415

 Score = 32.3 bits (72), Expect = 4.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 583 CSDCDEVFVKAESLELHRSTH 645
           CSDC + F+ A  L++HR TH
Sbjct: 303 CSDCGKAFISAGELQIHRRTH 323



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>Q8BXJ2:TREF1_MOUSE Transcriptional-regulating factor 1 - Mus musculus (Mouse)|
          Length = 1205

 Score = 32.3 bits (72), Expect = 4.7
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +1

Query: 574  MLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSR-----NVVEIIFQSSWLVGKPRA 738
            + PC +C +VF K +S   H  TH    E   +   +      +   I +++  VG P  
Sbjct: 1091 IFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPEL 1150

Query: 739  APICRIEMILKV 774
             P+ ++ ++  V
Sbjct: 1151 LPLDQLSLMKPV 1162



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>Q96PN7:TREF1_HUMAN Transcriptional-regulating factor 1 - Homo sapiens (Human)|
          Length = 1200

 Score = 32.3 bits (72), Expect = 4.7
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 574  MLPCSDCDEVFVKAESLELHRSTHHAVSELGAEDTSR-----NVVEIIFQSSWLVGKPRA 738
            + PC +C +VF K +S   H  TH    E   +   +      +   I +++  VG P  
Sbjct: 1085 IFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPGL 1144

Query: 739  APICRIEMI 765
             P+ ++ +I
Sbjct: 1145 LPLDQLSLI 1153



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>P60371:KR106_HUMAN Keratin-associated protein 10-6 - Homo sapiens (Human)|
          Length = 365

 Score = 32.3 bits (72), Expect = 4.7
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 919 CSGTAGSRCRRRRTVGNSSWPAHRCCSPQSP*RAPCTARTSPRSCR--SCAPS 767
           CSG + S C++   V   S P  +     SP ++ CT+  +P  C+  SC P+
Sbjct: 165 CSGISSSCCQQSSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPT 217



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>P18753:ZO84_XENLA Oocyte zinc finger protein XLCOF8.4 - Xenopus laevis (African|
           clawed frog)
          Length = 780

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 529 HSVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHRSTHHAV 654
           H  L    S+  G    PCS+C + F  +  L +HR TH  V
Sbjct: 234 HINLHNDLSIHAGKKPFPCSECGKCFAGSSELNVHRRTHTRV 275



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>P18751:ZO71_XENLA Oocyte zinc finger protein XLCOF7.1 - Xenopus laevis (African clawed|
            frog)
          Length = 898

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 13/167 (7%)
 Frame = +1

Query: 523  ECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH-----HAVSELGA 669
            EC      ++SLV       G     CS CD+ F  +  L +H+ TH      + SE G 
Sbjct: 655  ECGKCYSKKSSLVHHQRTHTGEKPFSCSKCDKCFASSSELNIHQRTHTGEKAFSCSECGK 714

Query: 670  EDTSRNVVEIIFQSSWLVGKPRAAPICRIEMILKVHSSGKTVERFEQYRERVKATAASST 849
              T+R+ +    Q      KP + P C    +    SS +     +Q    VK  +    
Sbjct: 715  CFTNRSQLS-RHQMIHTGEKPISCPECEECFV----SSSQLTAHQQQAHRMVKPFSCLEC 769

Query: 850  DEL--ARRSFPRCAADGNEILRFHCTTFTCSLGLAGATSLCRSSPQH 984
             +    R +F R          F C+   C  G +  +SL R    H
Sbjct: 770  GKCFSNRSNFARHQMIHTGEKPFSCS--ECRKGFSNQSSLARHQMTH 814



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>Q9Y473:ZN175_HUMAN Zinc finger protein 175 - Homo sapiens (Human)|
          Length = 711

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 14/74 (18%)
 Frame = +1

Query: 520 YECH---------SVLDPRTSLVGGAGMLPCSDCDEVFVKAESLELHR-----STHHAVS 657
           Y+CH         S LD    +  G     CSDC + F +   L +H+       HH  S
Sbjct: 475 YQCHNCGKSFISKSQLDIHHRIHTGEKPYECSDCGKTFTQKSHLNIHQKIHTGERHHVCS 534

Query: 658 ELGAEDTSRNVVEI 699
           E G     ++++ +
Sbjct: 535 ECGKAFNQKSILSM 548



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>Q22258:ATR_CAEEL Serine/threonine-protein kinase ATR - Caenorhabditis elegans|
          Length = 2531

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 812 YCS-NLSTVLPELCTFRIISILQIGAARGFPTSQLDWKIISTTF 684
           YC    S+ LP+L T  I S + +GA+ GF    L W IIST F
Sbjct: 138 YCDVEPSSSLPQLITPEIASAISLGAS-GFFRYHLKWNIISTLF 180



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>P08045:XFIN_XENLA Zinc finger protein Xfin - Xenopus laevis (African clawed frog)|
          Length = 1350

 Score = 31.6 bits (70), Expect = 8.1
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
 Frame = +1

Query: 523 ECHSVLDPRTSLVG------GAGMLPCSDCDEVFVKAESLELHRSTH-----HAVSELGA 669
           ECH     ++ LV       G     CS CD+ F +  +L  H+ TH     +  S+ G 
Sbjct: 386 ECHKGFIQKSDLVKHLRTHTGEKPFKCSHCDKKFTERSALAKHQRTHTGEKPYKCSDCGK 445

Query: 670 EDTSRNVVEIIFQSSWLVGKPRAAPIC 750
           E T R+ + I+ Q      +P    +C
Sbjct: 446 EFTQRSNL-ILHQRIHTGERPYKCTLC 471



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>Q9QZZ4:MYO15_MOUSE Myosin-XV - Mus musculus (Mouse)|
          Length = 3511

 Score = 31.6 bits (70), Expect = 8.1
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = -1

Query: 779  LCTFRIISILQIGAARGFPTSQLDWKII---STTFLLVSSAPSSETAWWVDLWSSRDS 615
            +C  R++  +  GAAR FP +QL+W  I   ++  L VS     + +  V  WS+ ++
Sbjct: 2167 VCQHRLLQAMGSGAARTFPPTQLEWTAIQEKASMALDVSCFNGDQFSCPVHTWSTGEA 2224


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 189,580,744
Number of extensions: 3576648
Number of successful extensions: 13558
Number of sequences better than 10.0: 24
Number of HSP's gapped: 13511
Number of HSP's successfully gapped: 26
Length of query: 456
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 339
Effective length of database: 68,593,924
Effective search space: 23253340236
Effective search space used: 23253340236
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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