Clone Information

BLAST Search Result

Clone Name	FLbaf100b05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisph...	280	3e-96
2	LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisph...	280	3e-95
3	LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisp...	280	9e-95
4	LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisph...	277	6e-94
5	LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisph...	132	5e-41
6	LOC_Os02g38300:12002.t03468:unspliced-genomic charged multiv...	40	5e-04
7	LOC_Os08g17540:12008.t01624:unspliced-genomic retrotransposo...	35	0.94
8	LOC_Os06g23390:12006.t02151:unspliced-genomic SF16-like prot...	35	1.3
9	LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, put...	34	1.5
10	LOC_Os12g43410:12012.t04010:unspliced-genomic thaumatin-like...	26	1.6
11	LOC_Os11g01594:12011.t004393:unspliced-genomic expressed pro...	34	1.8
12	LOC_Os07g11500:12007.t01023:unspliced-genomic retrotransposo...	34	1.8
13	LOC_Os06g07110:12006.t00595:unspliced-genomic retrotransposo...	34	1.8
14	LOC_Os05g26550:12005.t02309:unspliced-genomic retrotransposo...	34	1.8
15	LOC_Os03g62860:12003.t05513:unspliced-genomic glucan endo-1,...	30	1.8
16	LOC_Os01g08470:12001.t00725:unspliced-genomic protein bindin...	30	2.3
17	LOC_Os09g09470:12009.t00739:unspliced-genomic nucleotide bin...	34	2.4
18	LOC_Os08g14280:12008.t01303:unspliced-genomic retrotransposo...	34	2.4
19	LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like ...	27	2.7
20	LOC_Os09g02214:12009.t00121:unspliced-genomic Na+/H+ antipor...	30	2.9
21	LOC_Os12g06610:12012.t00546:unspliced-genomic expressed protein	29	3.0
22	LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein	33	3.3
23	LOC_Os05g19030:12005.t01670:unspliced-genomic expressed protein	33	3.3
24	LOC_Os02g07690:12002.t00666:unspliced-genomic VQ motif famil...	33	3.3
25	LOC_Os05g37700:12005.t03312:unspliced-genomic periplasmic be...	25	4.2
26	LOC_Os01g26039:12001.t02313:unspliced-genomic acyltransferas...	33	4.6
27	LOC_Os01g07720:12001.t00652:unspliced-genomic dolichyl-P-Man...	33	4.6
28	LOC_Os02g57950:12002.t05366:unspliced-genomic hypothetical p...	26	5.0
29	LOC_Os07g32880:12007.t02969:unspliced-genomic ATP synthase g...	32	5.5
30	LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposo...	30	6.0
31	LOC_Os04g46970:12004.t04224:unspliced-genomic cis-zeatin O-g...	30	6.2
32	LOC_Os05g17510:12005.t01520:unspliced-genomic conserved hypo...	32	6.3
33	LOC_Os02g35450:12002.t03183:unspliced-genomic DNA-repair pro...	26	7.7
34	LOC_Os07g49080:12007.t04536:unspliced-genomic COBRA-like pro...	29	7.7
35	LOC_Os11g44014:12011.t03931:unspliced-genomic retrotransposo...	32	8.6
36	LOC_Os10g01984:12010.t00094:unspliced-genomic transposon pro...	32	8.6
37	LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent ...	32	8.6
38	LOC_Os08g35520:12008.t03292:unspliced-genomic retrotransposo...	32	8.6
39	LOC_Os08g22210:12008.t02002:unspliced-genomic retrotransposo...	32	8.6
40	LOC_Os08g08190:12008.t00705:unspliced-genomic expressed protein	32	8.6
41	LOC_Os07g44670:12007.t04107:unspliced-genomic retrotransposo...	32	8.6
42	LOC_Os01g43030:12001.t03819:unspliced-genomic NMDA receptor-...	32	8.6
43	LOC_Os12g09310:12012.t00810:unspliced-genomic conserved hypo...	25	9.0
44	LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposo...	30	9.9

>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 2281
 Score =  280 bits (605), Expect(3) = 3e-96
 Identities = 106/125 (84%), Positives = 118/125 (94%)
 Frame = +3 / +3

                                                                       
Query: 411 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 590
           QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632

                                                                       
Query: 591 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 770
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812

                
Query: 771 CEESG 785
           CEESG
Sbjct: 813 CEESG 827



 Score = 70.3 bits (147), Expect(3) = 3e-96
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = +3 / +2

                                             
Query: 270 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           MAP+VMASSAT+VAPFQGLKSTAGLPV+RRSS+S
Sbjct: 206 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSS 307



 Score = 42.3 bits (86), Expect(3) = 3e-96
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +3 / +2

                                
Query: 354 RRSSASLGRVSNGGRIRCMQV 416
           R SS+S G VSNGGRIRCMQV
Sbjct: 293 RSSSSSFGNVSNGGRIRCMQV 355



 Score =  198 bits (427), Expect(3) = 4e-65
 Identities = 87/124 (70%), Positives = 97/124 (78%)
 Frame = -3 / -1

                                                                       
Query: 784 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 605
           PDSSQPGGL AMKL +CTC  LSKPM+RT ASGY          T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647

                                                                       
Query: 604 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLIPS 425
           QY PS*YPG+L  SR T PTLLNS+QGTHL+R R S CF+R+S V GGK DRVSNFL+PS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467

               
Query: 424 IGHT 413
           IGHT
Sbjct: 466 IGHT 455



 Score = 59.3 bits (123), Expect(3) = 4e-65
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3 / -2

                                      
Query: 349 TGRPAVDLSPWKGATVVADEAITAGAM 269
           TGRPAVDLSPWKGAT VADEAIT GA+
Sbjct: 285 TGRPAVDLSPWKGATEVADEAITEGAI 205



 Score = 30.4 bits (60), Expect(3) = 4e-65
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1 / -3

                        
Query: 414 PACT*SFRHC*PC 376
           PAC *SFRHC* C
Sbjct: 353 PACI*SFRHC*RC 315



 Score = 90.9 bits (192), Expect(3) = 3e-28
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = +2 / +2

                                                                       
Query: 404 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 583
           + +GVAD*G+ EVRD V+LA    GGP EA  +P P+ VGAL  VQQG +RLP*  Q+ R
Sbjct: 446 IQSGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITR 625

                             
Query: 584 VLRRPILDNVEAAYVRMH 637
           +L R +LD+VE A+V MH
Sbjct: 626 IL*R*VLDHVETAHVWMH 679



 Score = 45.1 bits (92), Expect(3) = 3e-28
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +2 / +2

                                             
Query: 695 LRPYHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 796
           LR +H L Q  AGAV QLHR+ ATGLRGVR+ ++
Sbjct: 737 LRSHHWL*QR*AGAVNQLHRV*ATGLRGVRRQLS 838



 Score = 35.4 bits (71), Expect(3) = 3e-28
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2 / +1

                                 
Query: 269 HGPRRDGFVGYHRRTLPGAQVH 334
           +G   DGFVG+ R +LPGAQVH
Sbjct: 205 NGSLGDGFVGHLRGSLPGAQVH 270



 Score = 72.5 bits (152), Expect(4) = 4e-22
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -2 / -3

                                                               
Query: 566 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHL 411
           LT DE++LAEL+A HPL ++QV++LLQ+ L  +  QVRQ LELL+ LNRPHL
Sbjct: 608 LTVDESDLAELQARHPLRSEQVLDLLQKVLHCQWRQVRQSLELLNALNRPHL 453



 Score = 42.3 bits (86), Expect(4) = 4e-22
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = -1 / -2

                                           
Query: 780 TPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 685
           TPRNPVA  R*S* TAPA  C+S+*  R+ QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727



 Score = 29.5 bits (58), Expect(4) = 4e-22
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = -1 / -3

                               
Query: 330 T*APGRVRRW*PTKPSRRGP 271
           T*APGR  R  PTKPS R P
Sbjct: 266 T*APGREPRRWPTKPSPREP 207



 Score = 25.8 bits (50), Expect(4) = 4e-22
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2 / -3

                       
Query: 644 GVGASEHRQLPH 609
           G+GAS+H Q PH
Sbjct: 686 GIGASKHGQFPH 651



 Score = 58.8 bits (122), Expect(3) = 5e-18
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = -1 / -2

                                                      
Query: 645 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPT 517
           W RCI+T A ST SS  R S R  C +HGRR +PC*T  +APT
Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRRIRPC*TPSKAPT 559



 Score = 40.0 bits (81), Expect(3) = 5e-18
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = -2 / -3

                                         
Query: 800 RSLCLAGLLATRWPEGDEADALHLPQVVEA 711
           + L  A LLATRW   DEAD LHLP VV+A
Sbjct: 842 KRLVAA*LLATRWLIRDEAD*LHLPNVVKA 753



 Score = 29.9 bits (59), Expect(3) = 5e-18
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -1 / -2

                            
Query: 462 ASKTGSRTS*YPQSATP 412
           AS T SRTS* PQSATP
Sbjct: 504 ASTTESRTS*CPQSATP 454



 Score = 34.1 bits (68), Expect(3) = 6e-06
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +1 / +1

                            
Query: 412 RCGRLRVSRSSRPCLTC 462
           RCGRLR  RSSR C TC
Sbjct: 454 RCGRLRALRSSRLCRTC 504



 Score = 33.6 bits (67), Expect(3) = 6e-06
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +1 / +1

                                  
Query: 727 GRCSASASSPSGHRVARSPARHK 795
           GRCS SASS   HRVARS A  K
Sbjct: 769 GRCS*SASSRISHRVARSQAATK 837



 Score = 26.7 bits (52), Expect(3) = 6e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1 / +1

                       
Query: 610 CGSCLCSDAPTP 645
           CG+C C DAP P
Sbjct: 652 CGNCPCLDAPMP 687

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>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1193

 Score =  280 bits (606), Expect(3) = 3e-95
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = +3 / +2

                                                                       
Query: 408 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGY 587
           +QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523

                                                                       
Query: 588 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 767
           YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703

                 
Query: 768 GCEESG 785
           GCEESG
Sbjct: 704 GCEESG 721



 Score = 70.7 bits (148), Expect(3) = 3e-95
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +3 / +2

                                                
Query: 261 YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           Y  MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+ S
Sbjct: 83  YVAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS 193



 Score = 38.2 bits (77), Expect(3) = 3e-95
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +3 / +2

                                   
Query: 354 RRSSASLGRVSNGGRIRCMQVWPI 425
           R +++  G VSNGGRI+CMQV+ I
Sbjct: 179 RSTNSGFGNVSNGGRIKCMQVYMI 250



 Score =  138 bits (295), Expect(4) = 1e-59
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -3 / -3

                                                                       
Query: 646 VASVHPNIGSFHIVQYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVR 467
           VASV PN+GSFH+VQY PS*YPG+L  SR T PTLLNSRQGTHL+R R S CF+R+S V 
Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVS 403

                             
Query: 466 GGK*DRVSNFLIPSIGHT 413
           GG+ DRVSNFL+PSIGHT
Sbjct: 402 GGRYDRVSNFLMPSIGHT 349



 Score = 63.4 bits (132), Expect(4) = 1e-59
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -3 / -3

                                            
Query: 784 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASG 686
           PDSSQPGGL AMKL +CTC  LSKPMIRT ASG
Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622



 Score = 52.8 bits (109), Expect(4) = 1e-59
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -3 / -3

                                      
Query: 349 TGRPAVDLSPWKGATVVADEAITAGAM 269
           TG PAVDLSPW GAT VA+EAIT GA+
Sbjct: 171 TGSPAVDLSPWNGATEVAEEAITVGAI 91



 Score = 33.6 bits (67), Expect(4) = 1e-59
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -1 / -1

                           
Query: 423 SATPACT*SFRHC*PC 376
           S  PACT*SFRHC* C
Sbjct: 248 SYIPACT*SFRHC*RC 201



 Score =  117 bits (251), Expect(4) = 5e-43
 Identities = 49/78 (62%), Positives = 64/78 (82%)
 Frame = +2 / +1

                                                                       
Query: 404 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 583
           +++GVA+*G+QEVRDP++ AT H GG  EA  +P  +QVGALPRVQQGW+RLP*  Q+ R
Sbjct: 340 IYSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSR 519

                             
Query: 584 VLRRPILDNVEAAYVRMH 637
           VLR  +LD+VEAA+VR+H
Sbjct: 520 VLRWQVLDHVEAAHVRLH 573



 Score = 47.3 bits (97), Expect(4) = 5e-43
 Identities = 22/29 (75%), Positives = 22/29 (75%)
 Frame = +2 / +1

                                        
Query: 695 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 781
           L PYHRLRQ  AGAV  LHRLQA  LRGV
Sbjct: 631 LCPYHRLRQRQAGAVD*LHRLQAPRLRGV 717



 Score = 35.4 bits (71), Expect(4) = 5e-43
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2 / +1

                                           
Query: 239 ASSSLQLIQYHGPRRDGFVGYHRRTLPGAQVH 334
           AS     ++ +GP RDG +G+ R ++P AQVH
Sbjct: 61  ASKLAN*LRGYGPHRDGLLGHLRGSIPRAQVH 156



 Score = 30.9 bits (61), Expect(4) = 5e-43
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2 / +1

                       
Query: 389 WRKDQVHAGVAD 424
           WRKDQVHAG+ D
Sbjct: 214 WRKDQVHAGIYD 249



 Score = 87.7 bits (185), Expect(3) = 1e-27
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -2 / -2

                                                                
Query: 566 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHLH 408
           LT DE+NLAELEA HPLG+ QV++LLQ+ L GE WQVR GLELLD LN PHL+
Sbjct: 502 LTVDESNLAELEARHPLGSKQVLDLLQKILHGEWWQVR*GLELLDALNWPHLN 344



 Score = 46.0 bits (94), Expect(3) = 1e-27
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = -1 / -1

                                            
Query: 783 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 685
           +TPRN  A RR*S* TAPA  CRSR*YG++ +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621



 Score = 28.1 bits (55), Expect(3) = 1e-27
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2 / -2

                       
Query: 644 GVGASEHRQLPH 609
           G+GA+EH QLPH
Sbjct: 580 GIGAAEHGQLPH 545



 Score = 75.8 bits (159), Expect(3) = 3e-21
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = -1 / -1

                                                       
Query: 645 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 514
           W RC RT AAST S+   RSTR +C +HGRR QPC*TRG+APTW
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTW 450



 Score = 35.9 bits (72), Expect(3) = 3e-21
 Identities = 18/29 (62%), Positives = 19/29 (65%)
 Frame = -2 / -2

                                        
Query: 797 SLCLAGLLATRWPEGDEADALHLPQVVEA 711
           SL    LLAT    GDEA+ LHLP VVEA
Sbjct: 733 SLVATRLLATWGLVGDEANQLHLPDVVEA 647



 Score = 28.1 bits (55), Expect(3) = 3e-21
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -1 / -1

                             
Query: 465 VASKTGSRTS*YPQSATP 412
           VA   GSRTS* PQ ATP
Sbjct: 401 VAGTIGSRTS*CPQLATP 348



 Score = 38.2 bits (77), Expect(3) = 4e-07
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +1 / +3

                             
Query: 412 RCGRLRVSRSSRPCLTCH 465
           RCG+LR SRSSRP  TCH
Sbjct: 348 RCGQLRASRSSRPYRTCH 401



 Score = 31.3 bits (62), Expect(3) = 4e-07
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +1 / +3

                                    
Query: 727 GRCSASASSPSGHRVARSPARHKLR 801
           GRCS  ASSP+  +VARS    KLR
Sbjct: 663 GRCS*LASSPTSPQVARSLVATKLR 737



 Score = 27.2 bits (53), Expect(3) = 4e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1 / +3

                       
Query: 610 CGSCLCSDAPTP 645
           CGSC CS AP P
Sbjct: 546 CGSCPCSAAPMP 581

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>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1344

 Score =  280 bits (605), Expect(3) = 9e-95
 Identities = 106/125 (84%), Positives = 118/125 (94%)
 Frame = +3 / +3

                                                                       
Query: 411 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 590
           QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647

                                                                       
Query: 591 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 770
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827

                
Query: 771 CEESG 785
           CEESG
Sbjct: 828 CEESG 842



 Score = 68.4 bits (143), Expect(3) = 9e-95
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3 / +3

                                             
Query: 270 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+++
Sbjct: 207 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSA 308



 Score = 39.1 bits (79), Expect(3) = 9e-95
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3 / +3

                                
Query: 354 RRSSASLGRVSNGGRIRCMQV 416
           R +SA LG VSNGGRI CMQV
Sbjct: 294 RSNSAGLGSVSNGGRISCMQV 356



 Score =  203 bits (438), Expect(2) = 2e-61
 Identities = 89/125 (71%), Positives = 98/125 (78%)
 Frame = -3 / -3

                                                                       
Query: 784 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 605
           PDSSQPGGL AMKL +CTC  LSKPM+RT ASGY          T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662

                                                                       
Query: 604 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLIPS 425
           QY PS*YPG+L  SR T PTLLNSRQGTHL+R R S CF+R+S V GG+ DRVSNFL+PS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482

                
Query: 424 IGHTC 410
           IGHTC
Sbjct: 481 IGHTC 467



 Score = 57.0 bits (118), Expect(2) = 2e-61
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -3 / -3

                                      
Query: 349 TGRPAVDLSPWKGATVVADEAITAGAM 269
           TG PAVDLSPWKGAT VADEAIT GA+
Sbjct: 286 TGSPAVDLSPWKGATEVADEAITVGAI 206



 Score = 94.1 bits (199), Expect(3) = 1e-30
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +2 / +2

                                                                       
Query: 410 AGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPRVL 589
           AGVAD* +QEV DPV+ AT H  GP EA  +P P+Q+GALPRV  G +RLP*  Q+  VL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646

                           
Query: 590 RRPILDNVEAAYVRMH 637
              +LD+VEAAYVRMH
Sbjct: 647 *WQVLDHVEAAYVRMH 694



 Score = 48.3 bits (99), Expect(3) = 1e-30
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +2 / +2

                                          
Query: 704 YHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 796
           +HRLRQ  AGAV  LHRLQA GLRGVR+ ++
Sbjct: 761 HHRLRQRQAGAVD*LHRLQAPGLRGVRRKLS 853



 Score = 35.9 bits (72), Expect(3) = 1e-30
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +2 / +2

                                 
Query: 269 HGPRRDGFVGYHRRTLPGAQVH 334
           +G  RDG VG+ R +LPGAQ+H
Sbjct: 206 NGAHRDGLVGHLRCSLPGAQIH 271



 Score = 80.8 bits (170), Expect(4) = 2e-27
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = -2 / -2

                                                               
Query: 566 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHL 411
           LT DE +L +LEA HP G +QV++LLQE L  E WQVRQGL+LLD  NRPHL
Sbjct: 623 LTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRERWQVRQGLKLLDAFNRPHL 468



 Score = 47.3 bits (97), Expect(4) = 2e-27
 Identities = 22/31 (70%), Positives = 23/31 (74%)
 Frame = -2 / -2

                                          
Query: 803 PRSLCLAGLLATRWPEGDEADALHLPQVVEA 711
           P SL  AGLLATR   GDEA+ LHLP VVEA
Sbjct: 860 PTSLVSAGLLATRGLVGDEANQLHLPDVVEA 768



 Score = 29.9 bits (59), Expect(4) = 2e-27
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -2 / -2

                       
Query: 644 GVGASEHRQLPH 609
           G+ ASEHRQLPH
Sbjct: 701 GISASEHRQLPH 666



 Score = 27.6 bits (54), Expect(4) = 2e-27
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -1 / -1

                              
Query: 327 *APGRVRRW*PTKPSRRGP 271
           *APGR +R  PT+PSR  P
Sbjct: 264 *APGREQRRWPTRPSRWAP 208



 Score = 68.0 bits (142), Expect(3) = 6e-21
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -1 / -1

                                                       
Query: 645 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 514
           W +CIRT*AAST SS    ST+ +C +HGRR++P *TRG+AP W
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIW 571



 Score = 41.8 bits (85), Expect(3) = 6e-21
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -1 / -1

                                     
Query: 783 RTPRNPVA*RR*S*RTAPAAGCRSR* 706
           RTPRNP A RR*S* TAPA  CRSR*
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR* 763



 Score = 29.0 bits (57), Expect(3) = 6e-21
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -1 / -1

                              
Query: 465 VASKTGSRTS*YPQSATPA 409
           VA  TGS+TS*  QSATPA
Sbjct: 522 VAGTTGSQTS*CLQSATPA 466



 Score = 40.9 bits (83), Expect(3) = 5e-11
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +1 / +1

                             
Query: 412 RCGRLRVSRSSRPCLTCH 465
           RCGRL+ SRS RPC TCH
Sbjct: 469 RCGRLKASRSLRPCRTCH 522



 Score = 40.5 bits (82), Expect(3) = 5e-11
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +1 / +1

                                            
Query: 727 GRCSASASSPSGHRVARSPARHKLRGETMAYVV 825
           GRCS  ASSP+  RVARSPA  KL G+  + +V
Sbjct: 784 GRCS*LASSPTSPRVARSPAETKLVGKPASSLV 882



 Score = 29.5 bits (58), Expect(3) = 5e-11
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +1 / +1

                       
Query: 610 CGSCLCSDAPTP 645
           CGSCLCSDA  P
Sbjct: 667 CGSCLCSDALMP 702

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>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1248

 Score =  277 bits (600), Expect(3) = 6e-94
 Identities = 105/124 (84%), Positives = 117/124 (94%)
 Frame = +3 / +2

                                                                       
Query: 414 VWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYD 593
           VWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694

                                                                       
Query: 594 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGC 773
           GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874

               
Query: 774 EESG 785
           EESG
Sbjct: 875 EESG 886



 Score = 68.0 bits (142), Expect(3) = 6e-94
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3 / +1

                                             
Query: 270 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           MAP+VMASSATTVAPFQGLKSTAG+PV+RRS  S
Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNS 366



 Score = 39.1 bits (79), Expect(3) = 6e-94
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3 / +1

                                
Query: 354 RRSSASLGRVSNGGRIRCMQV 416
           R  ++S G VSNGGRIRCMQV
Sbjct: 352 RSGNSSFGNVSNGGRIRCMQV 414



 Score =  201 bits (434), Expect(3) = 2e-65
 Identities = 90/124 (72%), Positives = 97/124 (78%)
 Frame = -3 / -1

                                                                       
Query: 784 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 605
           PDSSQPGGL AMKL  CTC  LSKPMIRT ASGY          T VASVHPN+GSFH+V
Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706

                                                                       
Query: 604 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLIPS 425
           QY PS*YPG+L  SR T PTLLNSRQGTHLER R S CFRR+S V GG+*+RVSNFL+PS
Sbjct: 705 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR*ERVSNFLMPS 526

               
Query: 424 IGHT 413
           IGHT
Sbjct: 525 IGHT 514



 Score = 57.9 bits (120), Expect(3) = 2e-65
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -3 / -2

                                      
Query: 349 TGRPAVDLSPWKGATVVADEAITAGAM 269
           TG PAVDLSPWKGATVVAD+AIT GA+
Sbjct: 344 TGMPAVDLSPWKGATVVADDAITEGAI 264



 Score = 29.5 bits (58), Expect(3) = 2e-65
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -1 / -3

                        
Query: 414 PACT*SFRHC*PC 376
           PACT*S RHC* C
Sbjct: 412 PACT*SCRHC*RC 374



 Score =  128 bits (274), Expect(4) = 7e-51
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +2 / +1

                                                                       
Query: 404 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 583
           V+ GVAD*G+QEVRDP+L AT H GGPPEA  +P P QVGALPRVQQG +RLP*  Q+PR
Sbjct: 505 VYLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPR 684

                             
Query: 584 VLRRPILDNVEAAYVRMH 637
           +LR  +LD+VEAA+VR+H
Sbjct: 685 ILRWQVLDHVEAAHVRVH 738



 Score = 57.0 bits (118), Expect(4) = 7e-51
 Identities = 23/29 (79%), Positives = 24/29 (82%)
 Frame = +2 / +1

                                        
Query: 695 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 781
           +RPYHRLRQ  AGA  QLHRLQA GLRGV
Sbjct: 796 IRPYHRLRQRQAGAAHQLHRLQAPGLRGV 882



 Score = 46.9 bits (96), Expect(4) = 7e-51
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +2 / +3

                                
Query: 272 GPRRDGFVGYHRRTLPGAQVH 334
           GP RDG VG+HRR+LPGAQVH
Sbjct: 267 GPLRDGVVGHHRRSLPGAQVH 329



 Score = 25.8 bits (50), Expect(4) = 7e-51
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2 / +3

                    
Query: 389 WRKDQVHAG 415
           WR+DQVHAG
Sbjct: 387 WRQDQVHAG 413



 Score = 95.5 bits (202), Expect(3) = 1e-33
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = -2 / -3

                                                                
Query: 566 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHLH 408
           LT DE++LAELEAGHPLG +QV++LLQE L GE WQV +GLELLD LNRPHL+
Sbjct: 667 LTVDESDLAELEAGHPLGTEQVLDLLQEVLHGERWQVGEGLELLDALNRPHLN 509



 Score = 49.2 bits (101), Expect(3) = 1e-33
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = -1 / -2

                                             
Query: 783 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQGT 682
           +TPR+P A RR*S*  APA  CRSR*YGR  QGT
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783



 Score = 43.2 bits (88), Expect(3) = 1e-33
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = -1 / -3

                               
Query: 330 T*APGRVRRW*PTKPSRRGP 271
           T*APGR RRW PT PSRRGP
Sbjct: 325 T*APGRERRWWPTTPSRRGP 266



 Score = 77.1 bits (162), Expect(3) = 6e-24
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -1 / -2

                                                       
Query: 645 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 514
           WR+C RT AAST SS   RS RG C +HGRR +PC*TRGRAPTW
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTW 615



 Score = 39.6 bits (80), Expect(3) = 6e-24
 Identities = 20/35 (57%), Positives = 20/35 (57%)
 Frame = -2 / -3

                                              
Query: 815 AIVSPRSLCLAGLLATRWPEGDEADALHLPQVVEA 711
           AI     L    LLA R   GDEAD LHLP VVEA
Sbjct: 916 AIYDDDGLVATRLLAARGLVGDEADELHLPDVVEA 812



 Score = 32.2 bits (64), Expect(3) = 6e-24
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -1 / -2

                             
Query: 465 VASKTGSRTS*YPQSATP 412
           VA + GSRTS* PQSATP
Sbjct: 566 VAGRRGSRTS*CPQSATP 513



 Score = 40.0 bits (81), Expect(3) = 1e-07
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +1 / +3

                             
Query: 412 RCGRLRVSRSSRPCLTCH 465
           RCGRLR SRSSRP  TCH
Sbjct: 513 RCGRLRASRSSRPSPTCH 566



 Score = 32.7 bits (65), Expect(3) = 1e-07
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +1 / +3

                             
Query: 727 GRCSASASSPSGHRVARS 780
           GRCS+SASSP+  R ARS
Sbjct: 828 GRCSSSASSPTSPRAARS 881



 Score = 25.8 bits (50), Expect(3) = 1e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1 / +3

                       
Query: 610 CGSCLCSDAPTP 645
           CGSC CS A TP
Sbjct: 711 CGSCPCSGALTP 746

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>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
           precursor, putative, expressed
          Length = 1519

 Score =  132 bits (283), Expect(3) = 5e-41
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = +3 / +3

                                                                       
Query: 549 GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLR 728
           G + R ++  PGYYDGRYWT+WKLPMFGC+DA  VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929

                             
Query: 729 QVQCVSFIAFRPPGCEES 782
           Q QC+SF+  +PP    S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983



 Score = 57.9 bits (120), Expect(3) = 5e-41
 Identities = 17/38 (44%), Positives = 31/38 (81%)
 Frame = +3 / +2

                                                 
Query: 435 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV 548
           +++E +SYLPPL+ +++ K++++++   WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604



 Score = 23.1 bits (44), Expect(3) = 5e-41
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3 / +1

                            
Query: 366 ASLGRVSNGGRIRCMQV 416
           A  G  SNG R  CMQV
Sbjct: 262 ARRGAASNGFRTYCMQV 312



 Score = 70.3 bits (147), Expect(2) = 4e-14
 Identities = 38/79 (48%), Positives = 42/79 (53%)
 Frame = -3 / -1

                                                                       
Query: 781 DSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 602
           +++  GGL   K  H   R LSK M R  ASGY          T  AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803

                              
Query: 601 YRPS*YPGELLCSRKTKPT 545
           Y PS*YPG  L  R   P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746



 Score = 31.8 bits (63), Expect(2) = 4e-14
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3 / -2

                                                  
Query: 547 TLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLI 431
           TL NSRQGTH   +  S        +RGG+*D  S  L+
Sbjct: 603 TLSNSRQGTHPLDMMNSISLEMDFALRGGR*DIASYLLL 487



 Score = 35.9 bits (72), Expect(2) = 0.001
 Identities = 18/33 (54%), Positives = 19/33 (57%)
 Frame = -1 / -2

                                            
Query: 642 RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQP 544
           R+ IRT AAST SS  RRST  S C  G    P
Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSGGSPPP 745



 Score = 30.4 bits (60), Expect(2) = 0.001
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2 / -1

                                             
Query: 545 LAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGL 444
           L +LEA  P      ++LL +GLR +G QVR  L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500

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>LOC_Os02g38300:12002.t03468:unspliced-genomic charged multivesicular body protein 6, putative, expressed|
          Length = 3579

 Score = 39.6 bits (80), Expect(2) = 5e-04
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -3 / -2

                                  
Query: 127  TIKWQIFYSSCKLQDLEFPVQL 62
            T+KWQI Y+SC+  +LE P+QL
Sbjct: 3392 TMKWQIIYNSCRFGNLEVPIQL 3327



 Score = 24.0 bits (46), Expect(2) = 5e-04
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2 / -1

                   
Query: 23   FCFFCSF 3
            FCFFCSF
Sbjct: 3207 FCFFCSF 3187



 Score = 40.5 bits (82), Expect = 0.021
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2 / +3

                                      
Query: 56   GAELNRELQVLQFAGAVKYLPFDCIT 133
            G EL+R+LQV + AG V YLPF C T
Sbjct: 3321 GTELDRDLQVAKSAGVVNYLPFHCNT 3398



 Score = 36.8 bits (74), Expect = 0.26
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1 / -3

                                      
Query: 132  VIQSNGRYFTAPANCRTWSSLFSSAP 55
            V+Q NGR FT PA+  TW SL +S P
Sbjct: 3397 VLQ*NGR*FTTPADLATWRSLSNSVP 3320



 Score = 33.6 bits (67), Expect = 2.4
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1 / +2

                                      
Query: 55   WS*AEQGTPSPAVCRSCKISAI*LYY 132
            W+*   G P   +CRSCK+SAI L Y
Sbjct: 3320 WN*VG*GPPGCQICRSCKLSAISL*Y 3397



 Score = 31.8 bits (63), Expect = 8.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2 / -1

                                           
Query: 146  NDRIK*YNQMADILQLLQTAGLGVPCSAQLH 54
            N R+  YN+MAD LQLLQ    G P   Q H
Sbjct: 3411 NLRVWYYNEMADNLQLLQIWQPGGPYPTQFH 3319

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>LOC_Os08g17540:12008.t01624:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 643

 Score = 35.0 bits (70), Expect = 0.94
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +1 / -2

                                           
Query: 724 CGRCSASASSPSGHRVARSPARHKLRGETMAY 819
           C RC AS SSP+GH  A +   H L+ +   Y
Sbjct: 123 CRRCWASTSSPTGHVAATANRHHHLQRKLSTY 28

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>LOC_Os06g23390:12006.t02151:unspliced-genomic SF16-like protein, putative|
          Length = 2320

 Score = 34.5 bits (69), Expect = 1.3
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +2 / +1

                                            
Query: 503  PDPLQVGALPRVQQGWLRLP*AQQLPRVLRRP 598
            P+P+Q+G   R   G LRL   QQL R  RRP
Sbjct: 922  PEPVQLGGARRCLDGHLRLEHEQQLQRRSRRP 1017

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>LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, putative, expressed|
          Length = 1374

 Score = 33.6 bits (67), Expect(2) = 1.5
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2 / +2

                                  
Query: 464 TPHHGGPPEAG*LPDPLQVGALP 532
           TP HGG P  G LP P   GA P
Sbjct: 350 TPSHGGGPSGGALPSPSHGGAAP 418



 Score = 21.7 bits (41), Expect(2) = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2 / +1

                               
Query: 701 PYHRLRQPAAGAVRQLHRLQ 760
           P+ RLR+   GAV +  RL+
Sbjct: 463 PWRRLRRRLPGAVPRWRRLR 522

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>LOC_Os12g43410:12012.t04010:unspliced-genomic thaumatin-like protein precursor, putative|
          Length = 1020

 Score = 26.3 bits (51), Expect(3) = 1.6
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1 / -3

                                  
Query: 591  RSTRGSCCAHGRRSQPC*TRGR 526
            R   GSCC   RR   C  RGR
Sbjct: 1012 RRRLGSCCCRRRRVSWCCLRGR 947



 Score = 23.1 bits (44), Expect(3) = 1.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1 / -1

                          
Query: 123 SNGRYFTAPANCRTW 79
           SNG Y ++  NC+ W
Sbjct: 375 SNGFYSSSRCNCQDW 331



 Score = 23.1 bits (44), Expect(3) = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1 / -2

                             
Query: 78  SSLFSSAPPAMQVVALPR 25
           S++  SAPP   V  LPR
Sbjct: 302 SNMHDSAPPQSPVAQLPR 249

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>LOC_Os11g01594:12011.t004393:unspliced-genomic expressed protein|
          Length = 1699

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -1 / -2

                                   
Query: 999  CIL*IWHRCCICVGRARIYICIY 931
            CI * WH  CICV   +IYI  Y
Sbjct: 1530 CIT*RWHAICICVLNQKIYIKTY 1462

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>LOC_Os07g11500:12007.t01023:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2526

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1 / +3

                              
Query: 724  CGRCSASASSPSGHRVAR 777
            C RC AS SSP+GHR+ R
Sbjct: 2244 CRRCWASTSSPTGHRIRR 2297

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>LOC_Os06g07110:12006.t00595:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4674

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1 / +2

                              
Query: 724  CGRCSASASSPSGHRVAR 777
            C RC AS SSP+GHR+ R
Sbjct: 4583 CRRCWASTSSPTGHRIRR 4636

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>LOC_Os05g26550:12005.t02309:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1215

 Score = 34.1 bits (68), Expect = 1.8
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1 / +3

                             
Query: 724 CGRCSASASSPSGHRVAR 777
           C RC AS SSP+GHR+ R
Sbjct: 180 CRRCWASTSSPTGHRIRR 233

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>LOC_Os03g62860:12003.t05513:unspliced-genomic glucan endo-1,3-beta-glucosidase A6 precursor, putative, expressed|
          Length = 2477

 Score = 29.9 bits (59), Expect(2) = 1.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3 / +3

                                                    
Query: 348  VSRRSSASLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 467
            V RR +A+ G    G R+R +Q  P +G +    L  +PP
Sbjct: 915  VRRRHAAAAGDAHAGVRVRAVQRGPQDGARHGAALGPVPP 1034



 Score = 25.8 bits (50), Expect(2) = 1.8
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3 / +2

                                              
Query: 231 CSRHPPLYS*YSTMAPAVMASSATTVAPFQGLKST 335
           CSR PP  S  ++  P+ + SS ++ AP     ST
Sbjct: 506 CSRRPPGCSAPTSPTPSCVRSSPSSSAPTPTSSST 610

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>LOC_Os01g08470:12001.t00725:unspliced-genomic protein binding protein, putative, expressed|
          Length = 2275

 Score = 29.9 bits (59), Expect(2) = 2.3
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3 / +2

                                                                 
Query: 210 GLPIVLKCSRHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           G P      R  P  S  +  A     +SAT  +P    ++TA    SRR+SA+
Sbjct: 671 GCPASCSTGRSTPSSSTTTASASTSRTTSATRRSPSSSSRTTASAAASRRASAT 832



 Score = 25.4 bits (49), Expect(2) = 2.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1 / +2

                                     
Query: 736  SASASSPSGHRVARSPARHKLRGET 810
            S + SSP+  R AR+P R    G T
Sbjct: 1076 SRTTSSPASRRPARTPCRATATGGT 1150

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>LOC_Os09g09470:12009.t00739:unspliced-genomic nucleotide binding protein, putative, expressed|
          Length = 7960

 Score = 33.6 bits (67), Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3 / -2

                                            
Query: 988  NMAQVLYMCRPC*NLHMHICSTTNARTNTDHR 893
            N  ++L    P *  H HI + +NA+TN DH+
Sbjct: 2526 NSNKILESSNPV*I*HFHIANNSNAKTNKDHK 2431

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>LOC_Os08g14280:12008.t01303:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1488

 Score = 33.6 bits (67), Expect = 2.4
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1 / +3

                              
Query: 724  CGRCSASASSPSGHRVAR 777
            C RC AS SSP+GHR+ R
Sbjct: 1080 CCRCWASTSSPTGHRIRR 1133

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>LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like protein pDIR7, putative, expressed|
          Length = 727

 Score = 27.2 bits (53), Expect(2) = 2.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1 / -2

                              
Query: 733 CSASASSPSGHRVARSPAR 789
           C +   SPSG R   SPAR
Sbjct: 372 CPSGGRSPSGRRTCTSPAR 316



 Score = 26.3 bits (51), Expect(2) = 2.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1 / -2

                         
Query: 409 CRCGRLRVSRSSRP 450
           CRCGR R +RSS P
Sbjct: 408 CRCGRRR*TRSSCP 367

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>LOC_Os09g02214:12009.t00121:unspliced-genomic Na+/H+ antiporter, probable CP0838, putative, expressed|
          Length = 12042

 Score = 29.9 bits (59), Expect(2) = 2.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2 / +3

                                
Query: 959   PTHIQHLCHIYNIQQADHC 1015
             PT + +LC +Y+++  DHC
Sbjct: 11418 PTLVGYLCFLYSVRGGDHC 11474



 Score = 27.2 bits (53), Expect(2) = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1 / +1

                                    
Query: 154  FHCVQTLKCCSQLSINAVMVCLLC 225
            FHC+  L CC+  S+  ++V   C
Sbjct: 6121 FHCLILLNCCTTHSLIFLLVLCTC 6192

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>LOC_Os12g06610:12012.t00546:unspliced-genomic expressed protein|
          Length = 6180

 Score = 29.0 bits (57), Expect(2) = 3.0
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1 / +2

                                        
Query: 142  SFHKFHCVQTLKCCSQLSINAVMVCLLC 225
            SFH        K CSQLSI  V+ CL C
Sbjct: 935  SFHHKESCFFFKKCSQLSIFTVL*CLPC 1018



 Score = 27.2 bits (53), Expect(2) = 3.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3 / +1

                                        
Query: 738  CVSFIAFRPPGCEESGKA*TTR*NNGLC 821
            C+S   F+ P C E+ K *+   +N +C
Sbjct: 2416 CLSIWCFQEPFCAENSKY*SVSSDNNIC 2499

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>LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein|
          Length = 1606

 Score = 33.1 bits (66), Expect = 3.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1 / +1

                                    
Query: 615  STLSSIGRRSTRGSCCAHGRRSQP 544
            S L+S+G RS+RG  C + RRS P
Sbjct: 1204 SGLTSVGERSSRGQPCRYRRRSPP 1275

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>LOC_Os05g19030:12005.t01670:unspliced-genomic expressed protein|
          Length = 3058

 Score = 33.1 bits (66), Expect = 3.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1 / +2

                                                
Query: 627 T*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPT 517
           T A +TLS   RR++R S C   RRS    T  R PT
Sbjct: 518 TSAPATLSRARRRTSRTSTCTRRRRSSTWATGARCPT 628

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>LOC_Os02g07690:12002.t00666:unspliced-genomic VQ motif family protein, expressed|
          Length = 1146

 Score = 33.1 bits (66), Expect = 3.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1 / +2

                                    
Query: 594 RRSTRGSCCAHGRRSQPC*TRGRAP 520
           RR  RG CC   RR + C  RGR P
Sbjct: 596 RRRRRGCCCRASRRRRCCRRRGRRP 670

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>LOC_Os05g37700:12005.t03312:unspliced-genomic periplasmic beta-glucosidase precursor, putative, expressed|
          Length = 4490

 Score = 24.9 bits (48), Expect(2) = 4.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1 / -1

                          
Query: 597 GRRSTRGSCCAHGRR 553
           GRR  R  CC  GRR
Sbjct: 470 GRRWRRRRCCGRGRR 426



 Score = 24.9 bits (48), Expect(2) = 4.2
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -3 / -1

                                              
Query: 568 CSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRG 464
           C R   P+    R G    R R*  C RRA   RG
Sbjct: 371 CRRPCGPSRRRRRGGAGRSRRR*GRCRRRARRWRG 267

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>LOC_Os01g26039:12001.t02313:unspliced-genomic acyltransferase/ catalytic, putative, expressed|
          Length = 9735

 Score = 32.7 bits (65), Expect = 4.6
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -3 / -2

                                       
Query: 1045 FFFFSIINSKTMVRLLYIINMAQVLYM 965
            ++FFS+ NS T+  ++YI+N    +++
Sbjct: 3530 WYFFSVFNSNTLYSIIYILNFKHAIHI 3450

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>LOC_Os01g07720:12001.t00652:unspliced-genomic dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative,|
           expressed
          Length = 3703

 Score = 32.7 bits (65), Expect = 4.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1 / +3

                                             
Query: 645 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQP 544
           WR    T +     ++GR ++R SCC+  RRS P
Sbjct: 66  WRGWASTASRRRRPTVGRSTSRRSCCSPTRRSSP 167

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>LOC_Os02g57950:12002.t05366:unspliced-genomic hypothetical protein|
          Length = 490

 Score = 25.8 bits (50), Expect(2) = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1 / +1

                                
Query: 178 CCSQLSINAVMVCLLCSSVAG 240
           CC+ + I+A M+C  C   +G
Sbjct: 208 CCACMEIDACMLCCACVGGSG 270



 Score = 24.0 bits (46), Expect(2) = 5.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3 / +1

                                       
Query: 321 GLKSTAGLPVSRRSSASLGRVSNGGRIR 404
           G   TAG   +R + A  GR + G R+R
Sbjct: 280 GFGWTAGWAGARLAGAGPGRAARGDRVR 363

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>LOC_Os07g32880:12007.t02969:unspliced-genomic ATP synthase gamma chain, chloroplast precursor, putative,|
           expressed
          Length = 1613

 Score = 31.8 bits (63), Expect(2) = 5.5
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -1 / +3

                              
Query: 318 GRVRRW*PTKPSRRGPWYC 262
           GR RRW P  PSRR  W C
Sbjct: 396 GRRRRWCPPAPSRRRWWRC 452



 Score = 21.7 bits (41), Expect(2) = 5.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1 / +3

                               
Query: 639 RCIRT*AASTLSSIGRRSTR 580
           RC+   AAST  +  RRS R
Sbjct: 303 RCVSCGAASTRCATRRRSRR 362

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>LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3502

 Score = 30.4 bits (60), Expect(2) = 6.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1 / -2

                             
Query: 724 CGRCSASASSPSGHRVAR 777
           C RC ASASSP+G  V+R
Sbjct: 375 CRRCWASASSPTGRLVSR 322



 Score = 24.0 bits (46), Expect(2) = 6.0
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +2 / -1

                                             
Query: 449  PVLLATPHHGGPPEAG*LPDPLQVGALPRVQQG 547
            P+ L+TP       A   P P   GA P   QG
Sbjct: 2854 PLTLSTPSTSSRSAASTPPSPSTTGAWPGYVQG 2756

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>LOC_Os04g46970:12004.t04224:unspliced-genomic cis-zeatin O-glucosyltransferase, putative, expressed|
          Length = 5077

 Score = 30.4 bits (60), Expect(2) = 6.2
 Identities = 20/59 (33%), Positives = 27/59 (45%)
 Frame = +3 / -1

                                                                       
Query: 243  PPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSASLGRVSNGGRIRCMQVW 419
            PPL S  S+MA  +  +  T++    G   T  L   +RSSAS G     G+ R    W
Sbjct: 3931 PPLESMASSMASWMSFAGVTSLCFSHGRTRTPALRYLQRSSASHGWSQCMGQARISYPW 3755



 Score = 24.4 bits (47), Expect(2) = 6.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1 / -2

                                   
Query: 880  HNFLLYDLCLYEHWLWSIYAYVN 948
            H F+ Y+L  YE +L  +  Y+N
Sbjct: 2349 HPFIAYELDGYEKFLKKLTRYIN 2281

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>LOC_Os05g17510:12005.t01520:unspliced-genomic conserved hypothetical protein|
          Length = 1820

 Score = 32.2 bits (64), Expect = 6.3
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +3 / -2

                                                                   
Query: 213 LPIVLKCSRHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSASLGR 380
           LP  +K   HPP Y      +  V++S   TVAP       A   +SR + AS GR
Sbjct: 541 LPHPIKWDPHPPFYRFSLFPSSPVVSSHLPTVAPSLPRCRPASSRLSRLAGASSGR 374

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>LOC_Os02g35450:12002.t03183:unspliced-genomic DNA-repair protein XRCC3, putative|
          Length = 873

 Score = 26.3 bits (51), Expect(2) = 7.7
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +3 / +2

                                                         
Query: 234 SRHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 371
           S  PP  +   + AP+  ASS     P    +S A  P  R SSAS
Sbjct: 101 SSPPPAPASSPSAAPSSTASSPAASRPPPSPRSPASPPPGRPSSAS 238



 Score = 25.8 bits (50), Expect(2) = 7.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1 / +2

                              
Query: 727 GRCSASASSPSGHRVARSP 783
           GR S+++SSPS  R  RSP
Sbjct: 218 GRPSSASSSPSSPRSPRSP 274

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>LOC_Os07g49080:12007.t04536:unspliced-genomic COBRA-like protein 7 precursor, putative, expressed|
          Length = 2373

 Score = 28.6 bits (56), Expect(2) = 7.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1 / +2

                                   
Query: 303  W*PTKPSRRGPWYCINCREEDAG 235
            W    PSRR  W C  CR    G
Sbjct: 1181 WTRRSPSRRSRWRCTRCRLTSTG 1249



 Score = 24.9 bits (48), Expect(2) = 7.7
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -1 / +2

                                                      
Query: 642 RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 514
           RR  RT A +T +  GRR T  +  A       C  R R  TW
Sbjct: 752 RRPRRTRAPATWTRAGRRRTSRAARATW*SPTTCSRRTRPRTW 880

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>LOC_Os11g44014:12011.t03931:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 11937

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1 / +1

                          
Query: 969   ICVGRARIYICIY 931
             ICV RARIYIC+Y
Sbjct: 10918 ICVSRARIYICMY 10956

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>LOC_Os10g01984:12010.t00094:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 15035

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1 / -1

                                                  
Query: 739   ASASSPSGHRVARSPARHKLRGETMAYVV*RSSVNFT 849
             A+ SSP G R +      K RGET+ Y++ +S+V  +
Sbjct: 13124 ATRSSPRGSRNSTESGDIKFRGETLYYLILQSTVQMS 13014

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>LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent epimerase/dehydratase family protein, putative,|
            expressed
          Length = 2014

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -1 / +1

                                                       
Query: 642  RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 514
            RRC R        S  R +T  +  +    S PC  RG APTW
Sbjct: 883  RRCTRRPRRPARPSPTRTTTSTASPSPASASSPCTGRGAAPTW 1011

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>LOC_Os08g35520:12008.t03292:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 6251

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1 / -1

                              
Query: 871  RLEHNFLLYDLCLYEHWL 924
            +L++ F+L+ LCL EHW+
Sbjct: 5453 KLQYGFVLFFLCLLEHWI 5400

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>LOC_Os08g22210:12008.t02002:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1543

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1 / +2

                             
Query: 724 CGRCSASASSPSGHRVAR 777
           C RC AS SSP+GH V R
Sbjct: 182 CRRCWASTSSPTGHLVCR 235

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>LOC_Os08g08190:12008.t00705:unspliced-genomic expressed protein|
          Length = 2990

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1 / -1

                                     
Query: 178  CCSQLSINAVMVCLLCSSVAGILLS 252
            C S L  N V  C+ C  +AGI+ S
Sbjct: 1793 CASGLDFNKVKACITCPGIAGIIAS 1719

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>LOC_Os07g44670:12007.t04107:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 7108

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1 / +2

                         
Query: 969  ICVGRARIYICIY 931
            ICV RARIYIC+Y
Sbjct: 6089 ICVSRARIYICMY 6127

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>LOC_Os01g43030:12001.t03819:unspliced-genomic NMDA receptor-regulated 1-like protein, putative, expressed|
          Length = 11869

 Score = 31.8 bits (63), Expect = 8.6
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1 / +1

                                  
Query: 127  YYLILSFHKFHCVQTLKCCSQL 192
            Y ++L FH+FHC + + C ++L
Sbjct: 3130 YVMLLLFHRFHCSRNVGCWTEL 3195

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>LOC_Os12g09310:12012.t00810:unspliced-genomic conserved hypothetical protein|
          Length = 480

 Score = 25.4 bits (49), Expect(2) = 9.0
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1 / +1

                              
Query: 597 GRRSTRGSCCAHGRRSQPC 541
           GR      CC   RR QPC
Sbjct: 331 GRTGPPVPCCVQRRRRQPC 387



 Score = 23.5 bits (45), Expect(2) = 9.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1 / +2

                                   
Query: 645 WRRCIRT*AASTLSSIGRRSTRGS 574
           W R  R  AA  L  +GRR  R S
Sbjct: 173 WHRGGRRPAAGVLEEVGRRRKRRS 244

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>LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 8938

 Score = 29.9 bits (59), Expect(2) = 9.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1 / +2

                              
Query: 724  CGRCSASASSPSGHRVAR 777
            C RC AS SSP+G  V+R
Sbjct: 1934 CHRCGASTSSPTGRLVSR 1987



 Score = 24.9 bits (48), Expect(2) = 9.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1 / +1

                      
Query: 409  CRCGRLRVSR 438
            CRCGRLR+ R
Sbjct: 1582 CRCGRLRLHR 1611


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 400,120,628
Number of extensions: 6265793
Number of successful extensions: 29527
Number of sequences better than 10.0: 44
Length of query: 349
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 299
Effective length of database: 52,799,986
Effective search space: 15787195814
Effective search space used: 15787195814
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result