ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf100b21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB180900.1| Brassica oleracea S-12 SP11 gene for S locus pro... 44 0.73
2gb|AC129572.6| Mus musculus chromosome 5, clone RP23-452L7, comp... 42 2.9
3gb|AC154124.5| Mus musculus chromosome 5, clone RP24-63G13, comp... 42 2.9
4gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, comple... 42 2.9
5gb|AC022014.3|AC022014 Homo sapiens chromosome 11 clone RP11-91E... 42 2.9
6gb|AC026168.3|AC026168 Homo sapiens chromosome 11 clone RP11-156... 42 2.9
7dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:R... 42 2.9

>dbj|AB180900.1| Brassica oleracea S-12 SP11 gene for S locus protein 11, complete cds
          Length = 17252
 Score = 44.1 bits (22), Expect = 0.73
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 419  tattagttctcagccgtattttccac 444
            |||||||||| |||||||||||||||
Sbjct: 7387 tattagttctgagccgtattttccac 7362



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>gb|AC129572.6| Mus musculus chromosome 5, clone RP23-452L7, complete sequence
          Length = 178011

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 662    tttctgatgtgtgccatctgg 682
              |||||||||||||||||||||
Sbjct: 162917 tttctgatgtgtgccatctgg 162937



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>gb|AC154124.5| Mus musculus chromosome 5, clone RP24-63G13, complete sequence
          Length = 199573

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 662   tttctgatgtgtgccatctgg 682
             |||||||||||||||||||||
Sbjct: 56220 tttctgatgtgtgccatctgg 56240



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>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence
          Length = 170404

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 662   tttctgatgtgtgccatctgg 682
             |||||||||||||||||||||
Sbjct: 27299 tttctgatgtgtgccatctgg 27319



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>gb|AC022014.3|AC022014 Homo sapiens chromosome 11 clone RP11-91E22 map 11q, complete sequence
          Length = 161192

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     actcagagaacagggaacaaa 25
             |||||||||||||||||||||
Sbjct: 73574 actcagagaacagggaacaaa 73594



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>gb|AC026168.3|AC026168 Homo sapiens chromosome 11 clone RP11-156E23 map 11q, complete sequence
          Length = 180508

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 5     actcagagaacagggaacaaa 25
             |||||||||||||||||||||
Sbjct: 93561 actcagagaacagggaacaaa 93541



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>dbj|AP006215.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-729P6, complete
             sequence
          Length = 189310

 Score = 42.1 bits (21), Expect = 2.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     actcagagaacagggaacaaa 25
             |||||||||||||||||||||
Sbjct: 32599 actcagagaacagggaacaaa 32619


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 131,187,947
Number of extensions: 6304528
Number of successful extensions: 126859
Number of sequences better than 10.0: 7
Number of HSP's gapped: 126859
Number of HSP's successfully gapped: 7
Length of query: 773
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 751
Effective length of database: 18,508,616,841
Effective search space: 13899971247591
Effective search space used: 13899971247591
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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