ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf100d08 |
|---|---|
| Clone Library Name | barley_pub |
>Q86V88:MGDP1_HUMAN Magnesium-dependent phosphatase 1 - Homo sapiens (Human)| Length = 176 Score = 107 bits (268), Expect = 5e-23 Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 15/156 (9%) Frame = +2 Query: 197 LPRLVVFDLDYTLWPFYCEC--------------RSKR-ESPSLYRHAKGIMCALKEKGV 331 LP+L VFDLDYTLWPF+ + R +R + LY ++ L+ GV Sbjct: 4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGV 63 Query: 332 DMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHKTEHFQKIHRKTGVPYKSMLFF 511 A ASR+ + A ++ +L FV +EI+ K HF+++ +KTG+P+ M+FF Sbjct: 64 PGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHFERLQQKTGIPFSQMIFF 121 Query: 512 DDENRNIQSVSKMGVTSVLVDNGLNLDMFKLGLSNF 619 DDE RNI VSK+GVT + + NG+NL GL F Sbjct: 122 DDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETF 157
>Q9D967:MGDP1_MOUSE Magnesium-dependent phosphatase 1 - Mus musculus (Mouse)| Length = 164 Score = 107 bits (266), Expect = 8e-23 Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 15/156 (9%) Frame = +2 Query: 197 LPRLVVFDLDYTLWPFYCEC--------------RSKR-ESPSLYRHAKGIMCALKEKGV 331 LP+L VFDLDYTLWPF+ + R +R ++ LY ++ L+ GV Sbjct: 4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGV 63 Query: 332 DMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHKTEHFQKIHRKTGVPYKSMLFF 511 +A ASR+ A ++ +L F+ +EI+ K HF+++H KTGVP+ M+FF Sbjct: 64 PVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHFERLHHKTGVPFSQMVFF 121 Query: 512 DDENRNIQSVSKMGVTSVLVDNGLNLDMFKLGLSNF 619 DDENRNI V ++GVT + + +G++L GL F Sbjct: 122 DDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETF 157
>P40081:YEW4_YEAST Uncharacterized protein YER134C - Saccharomyces cerevisiae (Baker's| yeast) Length = 178 Score = 53.1 bits (126), Expect = 1e-06 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 32/167 (19%) Frame = +2 Query: 200 PRLVVFDLDYTLWPFYCE---------------------CRSKRESPSLYRHAKGIMCAL 316 P + FDLDYT+WP YC+ CR E ++Y+ I+ L Sbjct: 5 PDVAAFDLDYTIWPCYCDTHLHGPFKPVKSSNGEVLTIICRDGYEL-TIYKDIPRILGDL 63 Query: 317 KEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIF-----------SSWTHKTEHFQ 463 K+ GV + ASR+ +IA+ + +++ V + S H + + Sbjct: 64 KDNGVKLMTASRTWAPEIAQEILKIFKVKYAGVVTPLANLFDEFQWGERSKIGHLRDGLK 123 Query: 464 KIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLNLDMFKL 604 ++ + + K + FDDE+RN + V K GV V V + N +KL Sbjct: 124 DLYNTSDLKSKKICLFDDESRN-KEVEKYGVKFVYVRDPENGPSWKL 169
>Q3YWN8:GPH_SHISS Phosphoglycolate phosphatase - Shigella sonnei (strain Ss046)| Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>Q83PX1:GPH_SHIFL Phosphoglycolate phosphatase - Shigella flexneri| Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>Q32AJ7:GPH_SHIDS Phosphoglycolate phosphatase - Shigella dysenteriae serotype 1| (strain Sd197) Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>Q31VP9:GPH_SHIBS Phosphoglycolate phosphatase - Shigella boydii serotype 4 (strain| Sb227) Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>P32662:GPH_ECOLI Phosphoglycolate phosphatase - Escherichia coli| Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>Q8FCW0:GPH_ECOL6 Phosphoglycolate phosphatase - Escherichia coli O6| Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>P58422:GPH_ECO57 Phosphoglycolate phosphatase - Escherichia coli O157:H7| Length = 252 Score = 35.4 bits (80), Expect = 0.31 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 3/109 (2%) Frame = +2 Query: 269 ESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQEIFSSWTHK 448 E L+ H + AL+ KG+ + + + PT +A ++ L++ F +K Sbjct: 108 EGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA-PLLEALDIAKYFSVVIGGDDVQNK 166 Query: 449 TEH---FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 H + + G+ + MLF D +IQ+ G SV + G N Sbjct: 167 KPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
>P0A8Y4:YIHX_SHIFL Phosphatase yihX - Shigella flexneri| Length = 199 Score = 32.3 bits (72), Expect = 2.6 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +2 Query: 458 FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLV 571 +Q + + G +FFDD NI+ +++G+TS+LV Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>P0A8Y3:YIHX_ECOLI Phosphatase yihX - Escherichia coli| Length = 199 Score = 32.3 bits (72), Expect = 2.6 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = +2 Query: 458 FQKIHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLV 571 +Q + + G +FFDD NI+ +++G+TS+LV Sbjct: 147 YQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 184
>Q9EYY5:GPH_KLEAE Phosphoglycolate phosphatase - Klebsiella aerogenes| Length = 253 Score = 31.6 bits (70), Expect = 4.5 Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 3/118 (2%) Frame = +2 Query: 242 FYCECRSKRESPSLYRHAKGIMCALKEKGVDMAIASRSPTSDIARAFIDKLELQPMFVAQ 421 +Y E + E L+ + AL KG+ +A+ + PT +A +D L++ F Sbjct: 102 YYAE--AAEEGSFLFPAVADTLGALHAKGLPLALITNKPTPFVA-PLLDALDIAKYFTVV 158 Query: 422 EIFSSWTHKTEHFQK---IHRKTGVPYKSMLFFDDENRNIQSVSKMGVTSVLVDNGLN 586 +K H + + K + +LF D +IQ+ G SV + G N Sbjct: 159 IGGDDVQNKKPHPEPLLLVAEKLSLAPAELLFVGDSRNDIQAAKAAGCCSVGLTYGYN 216
>Q29RH2:FA46B_BOVIN Protein FAM46B - Bos taurus (Bovine)| Length = 430 Score = 31.2 bits (69), Expect = 5.9 Identities = 23/74 (31%), Positives = 29/74 (39%) Frame = +1 Query: 280 PVPPRQGHHVRAQGEGGRHGHRVALAHLRHRQGLHRQARAPAHVRRAGNILQLDSQDRTF 459 P P + H GE AL HLRHR R+P +R G + R F Sbjct: 234 PTPMSEAFHPSVTGESLYGDFAEALDHLRHRV---IATRSPEEIRGGGLLKYCHLLVRGF 290 Query: 460 PKDPQKNWGSLQVY 501 P + G+LQ Y Sbjct: 291 RPRPSTDVGALQRY 304 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 134,461,281 Number of extensions: 2647297 Number of successful extensions: 7667 Number of sequences better than 10.0: 14 Number of HSP's gapped: 7653 Number of HSP's successfully gapped: 14 Length of query: 297 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 185 Effective length of database: 69,965,399 Effective search space: 12943598815 Effective search space used: 12943598815 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
